Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 2.1e-103 379.0 193 100.0
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.5e-24 117.1 113 54.0
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 3.7e-23 112.5 114 56.1
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 3.2e-22 109.4 118 50.0
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 3.2e-22 109.4 118 50.0
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 9.2e-22 107.8 125 50.4
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 3.5e-21 105.9 126 48.4
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 3.5e-21 105.9 126 48.4
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.7e-20 103.6 114 53.5
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 3.9e-20 102.4 124 43.5
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 5.0e-20 102.1 124 46.0
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 5.0e-20 102.1 126 46.8
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 6.6e-20 101.7 115 46.1
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 1.1e-19 100.9 99 50.5
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 4.3e-19 99.0 111 47.7
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 7.3e-19 98.2 116 44.0
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 9.5e-19 97.8 117 48.7
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 1.2e-18 97.4 113 51.3
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.2e-18 97.4 109 48.6
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 2.1e-18 96.7 125 46.4
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 2.1e-18 96.7 115 48.7
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 4.7e-18 95.5 110 46.4
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 4.7e-18 95.5 124 45.2
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 8.1e-18 94.7 106 47.2
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 1.4e-17 94.0 124 41.9
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 4.0e-17 92.4 126 40.5
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 5.2e-17 92.0 123 47.2
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 1.5e-16 90.5 127 38.6
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 1.5e-16 90.5 127 42.5
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 1.5e-16 90.5 109 43.1
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.0e-16 90.1 101 50.5
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 2.0e-16 90.1 127 46.5
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 2.6e-16 89.7 113 47.8
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 3.4e-16 89.4 121 40.5
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 3.4e-16 89.4 106 43.4
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 4.4e-16 89.0 98 48.0
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 4.4e-16 89.0 101 50.5
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 4.4e-16 89.0 101 50.5
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 4.4e-16 89.0 99 45.5
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 9.8e-16 87.8 132 40.9
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 9.8e-16 87.8 126 43.7
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.3e-15 87.4 155 37.4
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 1.7e-15 87.0 124 41.9
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 3.7e-15 85.9 100 43.0
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 4.9e-15 85.5 106 43.4
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 1.9e-14 83.6 125 41.6
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 4.1e-14 82.4 105 47.6
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 4.1e-14 82.4 93 44.1
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 5.4e-14 82.0 127 38.6
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 7.1e-14 81.6 125 44.0
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 7.1e-14 81.6 109 45.0
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 7.1e-14 81.6 109 45.0
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 9.2e-14 81.3 132 44.7
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 2.1e-13 80.1 98 48.0
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 3.5e-13 79.3 114 42.1
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 4.6e-13 79.0 125 39.2
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 6.0e-13 78.6 100 41.0
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 1.0e-12 77.8 101 41.6
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 1.7e-12 77.0 100 42.0
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 2.3e-12 76.6 105 49.5
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 3.0e-12 76.3 109 37.6
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 3.0e-12 76.3 126 40.5
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 5.1e-12 75.5 100 42.0
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 5.1e-12 75.5 100 42.0
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 5.1e-12 75.5 99 38.4
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 1.1e-11 74.3 104 38.5
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 3.3e-11 72.8 107 39.3
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 3.3e-11 72.8 105 38.1
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 9.5e-11 71.2 85 43.5
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 9.5e-11 71.2 88 40.9
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 2.8e-10 69.7 99 41.4
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 4.7e-10 68.9 103 38.8
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 6.2e-10 68.6 88 40.9
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 1.4e-09 67.4 108 38.9
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 2.3e-09 66.6 91 44.0
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 4.0e-09 65.9 101 38.6
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 8.9e-09 64.7 51 58.8
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 1.2e-08 64.3 97 36.1
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 2.0e-08 63.5 123 35.0
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 2.6e-08 63.2 99 41.4
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 2.6e-08 63.2 99 41.4
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 5.8e-08 62.0 103 37.9
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 9.9e-08 61.2 122 34.4
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.3e-07 60.8 105 36.2
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 2.2e-07 60.1 69 46.4
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 2.2e-07 60.1 98 35.7
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 2.2e-07 60.1 51 52.9
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 4.9e-07 58.9 97 35.1
Nitab4.5_0002456g0100 Nicotiana tabacum HOM05D007637 ORTHO05D009508 1.4e-06 57.4 59 50.8
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.4e-06 57.4 108 39.8
PGSC0003DMG400010395 Solanum tuberosum HOM05D007637 ORTHO05D009508 3.2e-06 56.2 127 30.7
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 9.2e-06 54.7 90 37.8


User provided reference genes

Program Settings