Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 7.1e-239 830.1 389 100.0
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 3.8e-208 728.0 458 76.0
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 3.2e-207 724.9 458 76.6
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 2.7e-206 721.8 458 76.0
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 4.6e-206 721.1 458 74.2
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 1.3e-205 719.5 458 75.5
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 2.3e-205 718.8 458 76.0
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 5.1e-205 717.6 458 76.4
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 1.5e-204 716.1 458 75.5
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 1.5e-204 716.1 458 74.7
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.3e-204 714.9 458 74.7
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 2.1e-203 712.2 458 75.5
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 2.8e-203 711.8 474 72.4
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 4.8e-203 711.1 458 74.5
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 1.8e-202 709.1 458 75.3
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 2.4e-202 708.8 458 74.2
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 3.1e-202 708.4 458 74.2
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 4.0e-202 708.0 458 74.9
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 5.3e-202 707.6 458 72.7
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 5.3e-202 707.6 458 74.9
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 9.0e-202 706.8 458 73.1
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 5.8e-201 704.1 458 73.6
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 7.6e-201 703.7 458 73.6
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 7.6e-201 703.7 458 74.5
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 1.3e-200 703.0 424 77.8
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 4.9e-200 701.0 458 73.1
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.5e-200 700.7 461 71.8
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 6.5e-200 700.7 461 71.8
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 8.4e-200 700.3 458 72.1
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 8.4e-200 700.3 458 73.1
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 8.4e-200 700.3 458 73.8
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 1.1e-199 699.9 458 73.8
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 4.2e-199 698.0 458 72.1
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 5.5e-199 697.6 459 73.9
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 2.1e-198 695.7 458 73.8
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 3.5e-198 694.9 458 73.4
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 3.5e-198 694.9 459 73.2
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 6.0e-198 694.1 457 71.8
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 1.5e-196 689.5 458 71.8
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 3.3e-196 688.3 458 73.1
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 9.7e-196 686.8 479 70.4
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 5.3e-194 681.0 458 72.1
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 7.7e-193 677.2 458 70.3
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 1.0e-192 676.8 458 70.3
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 1.7e-192 676.0 458 70.7
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 3.8e-192 674.9 458 71.8
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 5.0e-192 674.5 457 70.0
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 1.1e-191 673.3 458 69.0
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 4.2e-191 671.4 459 69.7
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 7.9e-190 667.2 455 68.6
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 3.0e-189 665.2 458 68.8
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 3.9e-189 664.8 458 67.9
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 3.9e-189 664.8 458 68.8
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 5.1e-189 664.5 461 69.0
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 6.7e-189 664.1 458 68.6
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 6.7e-189 664.1 458 68.6
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 1.1e-186 656.8 458 70.3
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 6.9e-186 654.1 458 67.9
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 3.4e-185 651.7 458 67.2
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 1.0e-184 650.2 461 67.9
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 1.9e-183 646.0 458 67.0
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 3.2e-183 645.2 458 67.0
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 3.2e-183 645.2 458 67.2
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 3.2e-183 645.2 458 67.0
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 2.7e-182 642.1 456 67.3
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 1.0e-181 640.2 463 66.1
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 1.4e-181 639.8 461 66.2
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 3.9e-181 638.3 457 66.3
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 7.4e-180 634.0 458 66.2
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.7e-179 632.9 443 67.7
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 2.2e-179 632.5 458 65.9
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 2.2e-179 632.5 458 67.9
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 2.8e-179 632.1 458 66.2
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 3.1e-178 628.6 485 62.9
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 1.5e-177 626.3 458 67.5
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 3.5e-177 625.2 458 66.2
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 7.7e-177 624.0 496 63.3
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 1.0e-176 623.6 458 67.9
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 1.7e-176 622.9 458 66.2
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 1.9e-175 619.4 458 64.8
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 9.1e-170 600.5 455 63.1
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 3.5e-169 598.6 468 61.1
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 1.9e-167 592.8 487 60.4
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 4.2e-167 591.7 458 62.9
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 1.5e-151 540.0 458 59.0
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 2.4e-146 522.7 458 55.0
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 7.0e-146 521.2 443 54.9
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.3e-144 516.9 443 54.6
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 8.0e-142 507.7 393 62.6
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 7.5e-140 501.1 456 52.6
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 3.3e-135 485.7 341 70.7
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 5.6e-135 485.0 462 50.6
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.8e-134 482.6 338 70.1
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 3.7e-131 472.2 339 68.4
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 1.9e-130 469.9 338 68.9
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.9e-130 469.9 339 68.1
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 4.1e-130 468.8 342 68.4
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 4.1e-130 468.8 342 68.4
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 1.9e-122 443.4 338 65.1
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 7.1e-122 441.4 450 47.6
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 1.6e-121 440.3 323 66.6
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 3.0e-120 436.0 337 62.9
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 1.1e-114 417.5 337 61.1
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.2e-114 415.6 311 65.9
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 7.3e-103 378.3 327 58.4
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 3.1e-101 372.9 203 81.8
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 4.2e-98 362.5 300 60.0
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.6e-97 360.5 289 64.7
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 2.1e-97 360.1 202 81.2
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 2.3e-96 356.7 291 59.8
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 8.4e-91 338.2 338 49.4
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 3.1e-85 319.7 276 59.1
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 3.6e-73 279.6 484 31.2
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 3.0e-72 276.6 450 32.9
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 8.8e-72 275.0 158 78.5
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.5e-59 232.3 110 96.4
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.5e-59 232.3 110 96.4
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.5e-58 231.1 110 95.5
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 4.0e-24 116.7 81 60.5
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 1.6e-12 78.2 40 85.0


User provided reference genes

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