Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G0446 Punica granatum HOM05D007926 ORTHO05D009983 4.2e-65 251.1 120 100.0
TAR627G0241 Trochodendron aralioides HOM05D007926 ORTHO05D009983 1.3e-26 123.2 105 54.3
CiPaw.09G102200 Carya illinoinensis HOM05D007926 ORTHO05D009983 5.0e-26 121.3 100 58.0
Cfa000107 Carpinus fangiana HOM05D007926 ORTHO05D009983 8.5e-26 120.6 105 54.3
Prupe.4G010900 Prunus persica HOM05D007926 ORTHO05D009983 1.5e-25 119.8 104 56.7
CSS0027622 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 2.5e-25 119.0 106 52.8
Eucgr.E03949 Eucalyptus grandis HOM05D007926 ORTHO05D009983 7.2e-25 117.5 104 52.9
RhsimUnG0109600 Rhododendron simsii HOM05D007926 ORTHO05D009983 7.2e-25 117.5 105 53.3
TWI63G0020 Tripterygium wilfordii HOM05D007926 ORTHO05D009983 7.2e-25 117.5 93 54.8
Hma1.2p1_0700F.1_g205740 Hydrangea macrophylla HOM05D007926 ORTHO05D009983 1.6e-24 116.3 104 53.8
FAN21G0219 Fragaria x ananassa HOM05D007926 ORTHO05D009983 4.7e-24 114.8 112 49.1
FAN25G3056 Fragaria x ananassa HOM05D007926 ORTHO05D009983 6.1e-24 114.4 103 50.5
Duzib192G0081 Durio zibethinus HOM05D007926 ORTHO05D009983 1.0e-23 113.6 74 64.9
Migut.H01604 Erythranthe guttata HOM05D007926 ORTHO05D009983 1.4e-23 113.2 76 64.5
Rhsim13G0146200 Rhododendron simsii HOM05D007926 ORTHO05D009983 1.4e-23 113.2 102 52.9
Gorai.011G009900 Gossypium raimondii HOM05D007926 ORTHO05D009983 1.8e-23 112.8 106 52.8
CANSAT56G0946 Cannabis sativa HOM05D007926 ORTHO05D009983 2.3e-23 112.5 96 54.2
FvH4_3g01020 Fragaria vesca HOM05D007926 ORTHO05D009983 2.3e-23 112.5 112 48.2
Oeu002767.1 Olea europaea HOM05D007926 ORTHO05D009983 4.0e-23 111.7 90 53.3
Gohir.A10G009400 Gossypium hirsutum HOM05D007926 ORTHO05D009983 8.8e-23 110.5 106 51.9
Sabra06G0007300 Salix brachista HOM05D007926 ORTHO05D009983 8.8e-23 110.5 117 50.4
Potri.006G009500 Populus trichocarpa HOM05D007926 ORTHO05D009983 1.5e-22 109.8 113 49.6
Manes.09G070200 Manihot esculenta HOM05D007926 ORTHO05D009983 2.6e-22 109.0 95 52.6
MD10G1331300 Malus domestica HOM05D007926 ORTHO05D009983 3.3e-22 108.6 114 48.2
Ciclev10017269m.g Citrus clementina HOM05D007926 ORTHO05D009983 5.7e-22 107.8 103 50.5
Atru.chr1.2458 Acer truncatum HOM05D007926 ORTHO05D009983 1.3e-21 106.7 67 67.2
CSS0041628 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 1.7e-21 106.3 97 50.5
Manes.13G107300 Manihot esculenta HOM05D007926 ORTHO05D009983 2.2e-21 105.9 95 48.4
Gohir.D10G009100 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.4e-20 103.2 103 50.5
RcHm_v2.0_Chr5g0001551 Rosa chinensis HOM05D007926 ORTHO05D009983 1.4e-20 103.2 112 46.4
SGA_v2.0_scaffold89G27497 Striga asiatica HOM05D007926 ORTHO05D009983 1.4e-20 103.2 92 50.0
AUR62021866 Chenopodium quinoa HOM05D007926 ORTHO05D009983 3.1e-20 102.1 91 52.7
DCAR_002220 Daucus carota HOM05D007926 ORTHO05D009983 3.1e-20 102.1 100 48.0
CSS0047308 Camellia sinensis var. sinensis HOM05D007926 ORTHO05D009983 4.1e-20 101.7 104 46.2
arahy.Tifrunner.gnm1.ann1.I7SJA3 Arachis hypogaea HOM05D007926 ORTHO05D009983 5.3e-20 101.3 92 51.1
Gohir.A06G205500 Gossypium hirsutum HOM05D007926 ORTHO05D009983 1.2e-19 100.1 108 50.0
Lalb_Chr18g0056941 Lupinus albus HOM05D007926 ORTHO05D009983 1.2e-19 100.1 105 47.6
Gohir.D06G216000 Gossypium hirsutum HOM05D007926 ORTHO05D009983 3.5e-19 98.6 108 49.1
Gorai.010G250100 Gossypium raimondii HOM05D007926 ORTHO05D009983 3.5e-19 98.6 99 52.5
Sp1g10740 Schrenkiella parvula HOM05D007926 ORTHO05D009983 4.5e-19 98.2 101 48.5
Solyc04g014750.1 Solanum lycopersicum HOM05D007926 ORTHO05D009983 4.5e-19 98.2 90 46.7
Sopen04g006860 Solanum pennellii HOM05D007926 ORTHO05D009983 4.5e-19 98.2 90 46.7
Glyma.15G114500 Glycine max HOM05D007926 ORTHO05D009983 5.9e-19 97.8 120 45.8
Nn1g03317 Nelumbo nucifera HOM05D007926 ORTHO05D009983 5.9e-19 97.8 76 60.5
PGSC0003DMG400023652 Solanum tuberosum HOM05D007926 ORTHO05D009983 1.0e-18 97.1 90 46.7
THA.LOC104809471 Tarenaya hassleriana HOM05D007926 ORTHO05D009983 3.8e-18 95.1 69 56.5
Sc05g0009590 Simmondsia chinensis HOM05D007926 ORTHO05D009983 8.5e-18 94.0 90 48.9
Aa31LG1G2660 Aethionema arabicum HOM05D007926 ORTHO05D009983 1.5e-17 93.2 111 43.2
BcaB02g06430 Brassica carinata HOM05D007926 ORTHO05D009983 1.5e-17 93.2 103 44.7
Carub.0001s1175 Capsella rubella HOM05D007926 ORTHO05D009983 1.9e-17 92.8 99 43.4
ATR0712G022 Amborella trichopoda HOM05D007926 ORTHO05D009983 2.5e-17 92.4 71 56.3
Eucgr.E03934 Eucalyptus grandis HOM05D007926 ORTHO05D009983 3.2e-17 92.0 73 58.9
Phvul.006G143300 Phaseolus vulgaris HOM05D007926 ORTHO05D009983 4.2e-17 91.7 111 40.5
AL1G23320 Arabidopsis lyrata HOM05D007926 ORTHO05D009983 5.5e-17 91.3 98 43.9
Thhalv10009916m.g Eutrema salsugineum HOM05D007926 ORTHO05D009983 5.5e-17 91.3 95 47.4
BcaC07g41751 Brassica carinata HOM05D007926 ORTHO05D009983 1.2e-16 90.1 98 44.9
BcaC05g25224 Brassica carinata HOM05D007926 ORTHO05D009983 1.6e-16 89.7 112 41.1
C05p11100 Brassica napus HOM05D007926 ORTHO05D009983 1.6e-16 89.7 112 41.1
BolC5t29857H Brassica oleracea HOM05D007926 ORTHO05D009983 1.6e-16 89.7 112 41.1
Sed0015463 Sechium edule HOM05D007926 ORTHO05D009983 1.6e-16 89.7 85 49.4
BcaB08g37432 Brassica carinata HOM05D007926 ORTHO05D009983 2.7e-16 89.0 98 45.9
BcaC07g41734 Brassica carinata HOM05D007926 ORTHO05D009983 2.7e-16 89.0 98 45.9
BcaC07g41735 Brassica carinata HOM05D007926 ORTHO05D009983 2.7e-16 89.0 98 45.9
CARHR012430 Cardamine hirsuta HOM05D007926 ORTHO05D009983 2.7e-16 89.0 98 40.8
A06p09430 Brassica napus HOM05D007926 ORTHO05D009983 6.1e-16 87.8 112 40.2
BraA06t24128Z Brassica rapa HOM05D007926 ORTHO05D009983 6.1e-16 87.8 112 40.2
BraA08t35224Z Brassica rapa HOM05D007926 ORTHO05D009983 1.5e-14 83.2 101 41.6
MELO3C021682.2 Cucumis melo HOM05D007926 ORTHO05D009983 3.4e-14 82.0 86 46.5
BolC8t52311H Brassica oleracea HOM05D007926 ORTHO05D009983 4.4e-14 81.6 93 44.1
A08p33040 Brassica napus HOM05D007926 ORTHO05D009983 5.7e-14 81.3 96 40.6
A09p64120 Brassica napus HOM05D007926 ORTHO05D009983 9.8e-14 80.5 93 43.0
BraA09t41758Z Brassica rapa HOM05D007926 ORTHO05D009983 9.8e-14 80.5 93 43.0
C08p47740 Brassica napus HOM05D007926 ORTHO05D009983 1.7e-13 79.7 93 43.0
TPR.G13087 Trifolium pratense HOM05D007926 ORTHO05D009983 2.2e-13 79.3 105 40.0
DCAR_004887 Daucus carota HOM05D000701 ORTHO05D000531 3.1e-12 75.5 67 49.3
HanXRQChr15g0470111 Helianthus annuus HOM05D007926 ORTHO05D009983 3.1e-12 75.5 81 40.7
Lj6g0017055 Lotus japonicus HOM05D007926 ORTHO05D009983 4.5e-11 71.6 102 37.3
AT1G12064 Arabidopsis thaliana HOM05D007926 ORTHO05D009983 7.7e-11 70.9 111 36.9
ClCG01G010240 Citrullus lanatus HOM05D007926 ORTHO05D009983 1.3e-10 70.1 85 38.8
BcaB02g06429 Brassica carinata HOM05D007926 ORTHO05D009983 4.7e-08 61.6 65 44.6
Medtr2g025700 Medicago truncatula HOM05D007926 ORTHO05D009983 1.8e-07 59.7 105 33.3


User provided reference genes

Program Settings