Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 0.0e+00 1129.0 569 100.0
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 1.8e-129 467.2 574 51.0
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.5e-125 454.1 577 49.0
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 1.4e-121 441.0 573 49.0
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 6.7e-121 438.7 530 49.4
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 4.8e-119 432.6 550 49.1
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 1.8e-118 430.6 561 46.7
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 5.3e-118 429.1 551 48.1
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 6.5e-116 422.2 542 48.9
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 5.5e-115 419.1 536 48.1
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 7.2e-115 418.7 524 49.2
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 7.2e-115 418.7 559 46.0
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 9.4e-115 418.3 552 48.9
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 1.2e-114 417.9 490 51.0
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 7.9e-114 415.2 499 50.9
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 1.8e-113 414.1 563 47.2
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.3e-113 413.7 563 47.2
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 3.0e-113 413.3 652 43.6
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 6.7e-113 412.1 513 49.7
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 6.7e-113 412.1 551 47.2
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 8.8e-113 411.8 440 52.5
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 1.1e-112 411.4 447 52.3
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 2.0e-112 410.6 578 48.3
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 4.4e-112 409.5 586 46.4
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 1.3e-111 407.9 526 49.4
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 2.2e-111 407.1 543 47.0
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 2.8e-111 406.8 494 49.2
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 8.2e-111 405.2 580 45.2
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 1.1e-110 404.8 525 47.8
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 1.8e-110 404.1 582 45.4
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 2.4e-110 403.7 516 47.7
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 3.1e-110 403.3 591 45.3
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 1.5e-109 401.0 622 44.9
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 2.6e-109 400.2 525 48.0
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 7.7e-109 398.7 551 45.2
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 7.7e-109 398.7 533 46.2
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 2.2e-108 397.1 510 48.0
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 2.9e-108 396.7 563 45.6
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 1.1e-107 394.8 557 45.8
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 4.2e-107 392.9 466 51.1
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 5.5e-107 392.5 576 45.0
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 9.4e-107 391.7 522 48.1
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 3.6e-106 389.8 624 42.5
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 6.1e-106 389.0 392 53.3
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 1.0e-105 388.3 604 43.2
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 1.8e-105 387.5 615 42.3
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 3.0e-105 386.7 450 52.7
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 3.0e-105 386.7 484 47.9
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 8.8e-105 385.2 560 44.3
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 8.8e-105 385.2 505 47.5
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 1.5e-104 384.4 431 50.8
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 2.6e-104 383.6 563 43.9
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 2.6e-104 383.6 563 43.9
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 2.6e-104 383.6 556 44.2
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 1.7e-103 380.9 424 53.1
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 8.2e-103 378.6 608 43.3
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 2.4e-102 377.1 535 46.4
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 7.0e-102 375.6 486 48.4
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 2.0e-101 374.0 401 52.4
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 2.6e-101 373.6 548 46.2
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 4.5e-101 372.9 445 49.2
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 5.9e-101 372.5 535 45.2
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 1.7e-100 370.9 545 45.1
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 5.0e-100 369.4 512 45.9
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 8.5e-100 368.6 729 38.4
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 8.5e-100 368.6 517 45.8
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 1.1e-99 368.2 548 45.4
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 2.5e-99 367.1 561 43.7
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 5.5e-99 365.9 565 43.5
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 7.2e-99 365.5 545 45.7
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 9.4e-99 365.2 570 43.3
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 1.6e-98 364.4 532 44.5
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 2.1e-98 364.0 499 46.3
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 8.0e-98 362.1 414 47.6
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 5.2e-97 359.4 534 46.4
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 1.8e-94 350.9 506 46.2
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 3.1e-94 350.1 509 42.6
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 2.7e-93 347.1 640 37.7
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 7.7e-93 345.5 385 49.4
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 1.0e-92 345.1 501 44.7
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 3.8e-92 343.2 382 50.8
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 5.0e-92 342.8 555 40.9
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.5e-91 341.3 396 50.5
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 1.9e-91 340.9 522 44.1
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 3.2e-91 340.1 326 53.7
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 2.1e-90 337.4 505 44.6
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 1.8e-89 334.3 519 43.2
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 4.0e-89 333.2 536 42.0
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 4.0e-89 333.2 567 41.3
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 2.0e-88 330.9 311 54.3
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 3.4e-88 330.1 350 50.3
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 5.7e-88 329.3 491 44.0
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 1.3e-87 328.2 355 52.4
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 2.8e-87 327.0 507 42.0
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 2.8e-87 327.0 347 53.0
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 8.3e-87 325.5 405 46.4
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.4e-86 324.7 447 45.6
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 4.1e-86 323.2 330 53.3
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 5.4e-86 322.8 450 45.3
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 2.0e-85 320.9 566 39.6
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 2.0e-85 320.9 400 47.5
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 7.7e-85 318.9 400 47.5
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 7.7e-85 318.9 400 47.5
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 7.7e-85 318.9 445 45.6
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 1.0e-84 318.5 322 54.3
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 1.3e-84 318.2 523 42.1
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 1.7e-84 317.8 492 42.5
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 8.6e-84 315.5 522 41.4
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 1.1e-83 315.1 320 54.4
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 1.1e-83 315.1 320 54.4
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 1.5e-83 314.7 317 54.3
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 1.5e-83 314.7 321 54.2
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 5.5e-83 312.8 389 47.6
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 5.5e-83 312.8 448 44.9
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 9.5e-83 312.0 328 52.1
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 6.1e-82 309.3 380 47.1
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 1.0e-81 308.5 293 53.2
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 2.2e-79 300.8 493 42.0
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 8.3e-79 298.9 552 40.6
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 3.1e-78 297.0 432 44.2
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 4.1e-78 296.6 394 45.7
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.2e-77 295.0 417 42.4
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 7.3e-75 285.8 380 44.2
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 1.2e-74 285.0 349 47.3
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.4e-73 281.6 359 46.2
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 8.9e-73 278.9 347 45.8
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 3.7e-71 273.5 350 46.3
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 6.6e-68 262.7 562 35.9
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 1.5e-64 251.5 296 49.3
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 1.5e-59 235.0 297 43.8
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 9.5e-59 232.3 245 55.1
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 4.7e-58 229.9 323 45.2
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 3.1e-57 227.3 236 56.4
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 6.8e-57 226.1 271 49.1
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 4.4e-56 223.4 389 38.3
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 1.5e-48 198.4 296 42.9
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 2.4e-46 191.0 268 43.7
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 4.2e-46 190.3 157 61.8
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 1.6e-37 161.8 502 28.5
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 5.4e-30 136.7 201 39.8
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 6.0e-29 133.3 506 28.1
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 2.3e-28 131.3 395 30.1
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 3.0e-28 131.0 459 30.9
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 3.9e-28 130.6 198 40.9
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 6.4e-23 113.2 220 33.2
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 1.1e-22 112.5 252 41.7
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 3.0e-20 104.4 188 44.7
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.2e-16 92.4 209 33.5
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 6.9e-09 66.6 147 41.5
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 5.9e-08 63.5 216 28.2
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 1.3e-07 62.4 38 73.7
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 1.1e-06 59.3 78 43.6
CDE03G0290 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 1.9e-06 58.5 161 31.1


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