Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 1.0e-64 250.0 133 100.0
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 3.0e-40 168.7 132 65.9
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 4.4e-39 164.9 132 65.9
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 9.7e-39 163.7 133 63.2
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 7.7e-36 154.1 133 60.2
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 2.9e-35 152.1 133 60.2
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 2.9e-35 152.1 131 61.1
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 5.0e-35 151.4 132 60.6
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 2.5e-34 149.1 128 59.4
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 2.5e-34 149.1 128 60.9
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 4.2e-34 148.3 132 62.1
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 9.4e-34 147.1 132 60.6
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 1.6e-33 146.4 128 60.2
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 1.6e-33 146.4 128 60.2
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 2.7e-33 145.6 123 65.0
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 6.1e-33 144.4 128 60.2
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 6.1e-33 144.4 131 60.3
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 1.0e-32 143.7 128 59.4
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 1.0e-32 143.7 126 64.3
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 1.4e-32 143.3 115 62.6
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 1.8e-32 142.9 126 60.3
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 2.3e-32 142.5 119 67.2
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 2.3e-32 142.5 119 67.2
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 3.0e-32 142.1 127 61.4
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 5.2e-32 141.4 119 62.2
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 6.8e-32 141.0 131 56.5
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 6.8e-32 141.0 129 59.7
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 1.2e-31 140.2 121 65.3
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 1.5e-31 139.8 129 57.4
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.5e-31 139.8 132 58.3
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 2.0e-31 139.4 133 59.4
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 2.6e-31 139.0 121 65.3
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 3.4e-31 138.7 129 57.4
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 5.7e-31 137.9 130 60.0
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 5.7e-31 137.9 121 60.3
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 5.7e-31 137.9 119 63.0
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 5.7e-31 137.9 119 63.0
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 7.5e-31 137.5 132 57.6
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 7.5e-31 137.5 126 61.9
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 9.7e-31 137.1 132 58.3
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 9.7e-31 137.1 132 58.3
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 9.7e-31 137.1 128 57.8
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 9.7e-31 137.1 128 57.8
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 9.7e-31 137.1 132 58.3
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 1.7e-30 136.3 123 61.0
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 2.2e-30 136.0 121 63.6
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 2.2e-30 136.0 127 58.3
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 2.8e-30 135.6 129 58.9
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 3.7e-30 135.2 119 63.0
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 4.8e-30 134.8 132 57.6
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 4.8e-30 134.8 132 57.6
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 4.8e-30 134.8 132 57.6
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 4.8e-30 134.8 119 62.2
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 8.3e-30 134.0 120 62.5
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 1.4e-29 133.3 127 59.1
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 1.4e-29 133.3 127 58.3
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 1.8e-29 132.9 132 56.8
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 2.4e-29 132.5 127 59.1
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 2.4e-29 132.5 112 58.9
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 3.1e-29 132.1 119 60.5
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 4.1e-29 131.7 131 55.7
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 7.0e-29 131.0 130 56.9
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 7.0e-29 131.0 129 56.6
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 9.1e-29 130.6 130 56.9
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 9.1e-29 130.6 105 64.8
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 9.1e-29 130.6 132 53.0
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 1.6e-28 129.8 125 57.6
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 1.6e-28 129.8 123 59.3
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 2.0e-28 129.4 97 68.0
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 2.0e-28 129.4 121 63.6
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 2.7e-28 129.0 127 59.8
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 7.7e-28 127.5 130 54.6
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.7e-27 126.3 129 55.0
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 1.7e-27 126.3 119 58.0
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 2.2e-27 125.9 130 54.6
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 2.9e-27 125.6 122 57.4
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 2.9e-27 125.6 119 58.0
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 3.8e-27 125.2 119 57.1
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 8.5e-27 124.0 126 54.8
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 1.1e-26 123.6 120 55.0
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.5e-26 122.5 133 53.4
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 3.2e-26 122.1 131 55.7
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 3.2e-26 122.1 117 59.0
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 4.2e-26 121.7 125 56.0
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 4.2e-26 121.7 125 54.4
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 5.5e-26 121.3 127 58.3
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 1.2e-25 120.2 127 55.1
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 1.2e-25 120.2 130 50.0
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.6e-25 119.8 103 60.2
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 1.6e-25 119.8 135 53.3
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.1e-25 119.4 127 52.0
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 2.1e-25 119.4 123 54.5
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 2.1e-25 119.4 133 52.6
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 6.1e-25 117.9 99 60.6
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 1.8e-24 116.3 130 50.0
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 2.3e-24 115.9 109 58.7
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 3.0e-24 115.5 128 51.6
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 3.0e-24 115.5 131 54.2
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 2.6e-23 112.5 126 51.6
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 3.4e-23 112.1 111 54.1
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 1.3e-22 110.2 133 45.9
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 1.7e-22 109.8 88 63.6
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 4.8e-22 108.2 122 51.6
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 1.1e-21 107.1 126 50.8
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 1.8e-21 106.3 92 57.6
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 2.4e-21 105.9 120 50.8
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 5.4e-21 104.8 117 49.6
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 7.0e-21 104.4 124 51.6
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.0e-19 100.5 123 47.2
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 5.0e-19 98.2 126 42.9
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 4.2e-18 95.1 111 50.5
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 1.2e-17 93.6 107 46.7
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.1e-17 92.8 73 65.8
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 2.1e-17 92.8 92 48.9
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 6.1e-17 91.3 70 68.6
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 8.0e-17 90.9 120 43.3
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 8.0e-17 90.9 87 59.8
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 2.3e-16 89.4 85 63.5
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 4.0e-16 88.6 119 47.1
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 8.9e-16 87.4 70 70.0
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 1.2e-15 87.0 81 53.1
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 4.4e-15 85.1 85 52.9
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 1.9e-10 69.7 94 40.4
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 2.5e-10 69.3 116 37.1
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 4.4e-07 58.5 80 36.2


User provided reference genes

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