Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR042G0282 Punica granatum HOM05D006147 ORTHO05D007501 3.8e-207 724.5 358 100.0
Eucgr.G01732 Eucalyptus grandis HOM05D006147 ORTHO05D007501 4.9e-162 574.7 348 80.2
FAN27G3378 Fragaria x ananassa HOM05D006147 ORTHO05D007501 2.3e-159 565.8 356 77.2
QL11p046465 Quercus lobata HOM05D006147 ORTHO05D007501 3.0e-159 565.5 356 77.5
Cpa.g.sc150.15 Carica papaya HOM05D006147 ORTHO05D007501 3.9e-159 565.1 346 81.5
TWI31G1450 Tripterygium wilfordii HOM05D006147 ORTHO05D007501 6.7e-159 564.3 358 77.9
Cfa005114 Carpinus fangiana HOM05D006147 ORTHO05D007501 8.7e-159 563.9 347 81.3
COL.COLO4_26048 Corchorus olitorius HOM05D006147 ORTHO05D007501 8.7e-159 563.9 353 79.3
MD05G1055500 Malus domestica HOM05D006147 ORTHO05D007501 8.7e-159 563.9 356 77.8
Prupe.8G083600 Prunus persica HOM05D006147 ORTHO05D007501 1.1e-158 563.5 356 78.1
RcHm_v2.0_Chr6g0267981 Rosa chinensis HOM05D006147 ORTHO05D007501 3.3e-158 562.0 356 77.2
Gohir.A03G199400 Gossypium hirsutum HOM05D006147 ORTHO05D007501 7.4e-158 560.8 344 81.4
Gohir.D02G220700 Gossypium hirsutum HOM05D006147 ORTHO05D007501 4.8e-157 558.1 344 81.1
TAR628G0064 Trochodendron aralioides HOM05D006147 ORTHO05D007501 6.2e-157 557.8 361 76.2
Potri.009G124800 Populus trichocarpa HOM05D006147 ORTHO05D007501 8.1e-157 557.4 352 78.4
MD10G1062800 Malus domestica HOM05D006147 ORTHO05D007501 1.1e-156 557.0 356 77.5
Sabra09G0095800 Salix brachista HOM05D006147 ORTHO05D007501 1.4e-156 556.6 359 77.2
Ciclev10028728m.g Citrus clementina HOM05D006147 ORTHO05D007501 5.3e-156 554.7 349 77.9
FAN15G0109 Fragaria x ananassa HOM05D006147 ORTHO05D007501 3.8e-154 548.5 362 75.1
Atru.chr5.3146 Acer truncatum HOM05D006147 ORTHO05D007501 6.4e-154 547.7 344 79.1
Thecc.02G074800 Theobroma cacao HOM05D006147 ORTHO05D007501 1.9e-153 546.2 353 77.6
Lalb_Chr03g0025341 Lupinus albus HOM05D006147 ORTHO05D007501 4.2e-153 545.0 346 76.3
VMungo1127G0575 Vigna mungo HOM05D006147 ORTHO05D007501 5.5e-153 544.7 356 75.3
Medtr4g072040 Medicago truncatula HOM05D006147 ORTHO05D007501 7.1e-153 544.3 348 76.1
GSVIVG01024169001 Vitis vinifera HOM05D006147 ORTHO05D007501 1.6e-152 543.1 362 75.7
TPR.G28159 Trifolium pratense HOM05D006147 ORTHO05D007501 6.7e-151 537.7 348 74.4
CAN.G1635.6 Capsicum annuum HOM05D006147 ORTHO05D007501 1.5e-150 536.6 359 73.3
arahy.Tifrunner.gnm1.ann1.JUX7JJ Arachis hypogaea HOM05D006147 ORTHO05D007501 2.5e-150 535.8 352 74.1
Duzib248G0035 Durio zibethinus HOM05D006147 ORTHO05D007501 3.3e-150 535.4 393 70.5
Aqoxy6G02357 Aquilegia oxysepala HOM05D006147 ORTHO05D007501 7.4e-150 534.3 353 73.1
arahy.Tifrunner.gnm1.ann1.S6V2XE Arachis hypogaea HOM05D006147 ORTHO05D007501 2.1e-149 532.7 352 73.9
CANSAT11G2690 Cannabis sativa HOM05D006147 ORTHO05D007501 2.1e-149 532.7 344 76.2
Glyma.11G110000 Glycine max HOM05D006147 ORTHO05D007501 2.1e-149 532.7 357 73.9
AUR62016834 Chenopodium quinoa HOM05D006147 ORTHO05D007501 3.7e-149 531.9 349 75.4
SalBow3G3875 Salvia bowleyana HOM05D006147 ORTHO05D007501 8.2e-149 530.8 356 73.3
Sed0012779 Sechium edule HOM05D006147 ORTHO05D007501 1.1e-148 530.4 348 74.1
vmacro17420 Vaccinium macrocarpon HOM05D006147 ORTHO05D007501 1.8e-148 529.6 381 70.9
Ca_20936_v3 Cicer arietinum L. HOM05D006147 ORTHO05D007501 3.1e-148 528.9 348 74.4
Lj3g0027328 Lotus japonicus HOM05D006147 ORTHO05D007501 3.1e-148 528.9 347 74.4
Manes.04G083100 Manihot esculenta HOM05D006147 ORTHO05D007501 4.0e-148 528.5 305 82.6
EL10Ac9g21633 Beta vulgaris HOM05D006147 ORTHO05D007501 5.3e-148 528.1 349 73.6
CSS0016386 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 5.3e-148 528.1 301 83.7
CiPaw.05G073500 Carya illinoinensis HOM05D006147 ORTHO05D007501 5.3e-148 528.1 301 83.7
Thhalv10000221m.g Eutrema salsugineum HOM05D006147 ORTHO05D007501 1.5e-147 526.6 355 73.8
CSS0033675 Camellia sinensis var. sinensis HOM05D006147 ORTHO05D007501 3.4e-147 525.4 301 83.1
PSO210G6769 Papaver somniferum HOM05D006147 ORTHO05D007501 3.4e-147 525.4 372 69.4
Haze_02237 Corylus avellana HOM05D006147 ORTHO05D007501 7.6e-147 524.2 392 70.2
Migut.N01278 Erythranthe guttata HOM05D006147 ORTHO05D007501 4.9e-146 521.5 356 71.3
CsaV3_7G000410 Cucumis sativus L. HOM05D006147 ORTHO05D007501 6.5e-146 521.2 346 73.4
A04p16060 Brassica napus HOM05D006147 ORTHO05D007501 1.9e-145 519.6 354 72.0
AL4G10420 Arabidopsis lyrata HOM05D006147 ORTHO05D007501 3.2e-145 518.8 355 72.7
C04p50520 Brassica napus HOM05D006147 ORTHO05D007501 5.5e-145 518.1 349 72.5
Carub.0004s0032 Capsella rubella HOM05D006147 ORTHO05D007501 5.5e-145 518.1 355 71.8
THA.LOC104804110 Tarenaya hassleriana HOM05D006147 ORTHO05D007501 1.2e-144 516.9 355 71.8
AUR62010384 Chenopodium quinoa HOM05D006147 ORTHO05D007501 4.6e-144 515.0 386 68.7
ECA233G5423 Erigeron canadensis HOM05D006147 ORTHO05D001140 4.6e-144 515.0 359 71.6
BcaC02g08802 Brassica carinata HOM05D006147 ORTHO05D007501 1.0e-143 513.8 349 71.9
BolC4t26650H Brassica oleracea HOM05D006147 ORTHO05D007501 1.0e-143 513.8 349 71.9
PGSC0003DMG402031287 Solanum tuberosum HOM05D006147 ORTHO05D007501 3.9e-143 511.9 351 71.2
Peaxi162Scf00684g00123 Petunia axillaris HOM05D006147 ORTHO05D007501 6.7e-143 511.1 312 77.9
Aa31LG7G15210 Aethionema arabicum HOM05D006147 ORTHO05D007501 1.1e-142 510.4 355 71.0
AT2G21280 Arabidopsis thaliana HOM05D006147 ORTHO05D007501 1.1e-142 510.4 355 73.2
CARHR112150 Cardamine hirsuta HOM05D006147 ORTHO05D007501 1.9e-142 509.6 355 70.7
Glyma.12G036900 Glycine max HOM05D006147 ORTHO05D007501 2.5e-142 509.2 304 79.3
Actinidia02248 Actinidia chinensis HOM05D006147 ORTHO05D007501 3.3e-142 508.8 301 82.1
Sopen09g034870 Solanum pennellii HOM05D006147 ORTHO05D007501 3.3e-142 508.8 351 70.7
Gorai.005G248600 Gossypium raimondii HOM05D006147 ORTHO05D007501 4.3e-142 508.4 330 77.3
Solyc09g091970.4 Solanum lycopersicum HOM05D006147 ORTHO05D007501 9.7e-142 507.3 351 70.7
Oeu055635.1 Olea europaea HOM05D006147 ORTHO05D007501 1.3e-141 506.9 307 78.5
Sp4g00470 Schrenkiella parvula HOM05D006147 ORTHO05D007501 1.3e-141 506.9 355 71.5
Psat7g138880 Pisum sativum HOM05D006147 ORTHO05D007501 3.1e-140 502.3 301 79.4
Phvul.011G038600 Phaseolus vulgaris HOM05D006147 ORTHO05D007501 2.0e-139 499.6 301 79.4
Hund00177 Selenicereus undatus HOM05D006147 ORTHO05D007501 4.5e-139 498.4 323 73.4
Hund00185 Selenicereus undatus HOM05D006147 ORTHO05D007501 1.7e-138 496.5 310 75.5
Lj5C189G13 Lonicera japonica HOM05D006147 ORTHO05D007501 8.5e-138 494.2 328 74.7
ATR0149G025 Amborella trichopoda HOM05D006147 ORTHO05D007501 1.0e-135 487.3 357 69.2
Rhsim05G0068100 Rhododendron simsii HOM05D006147 ORTHO05D007501 2.3e-135 486.1 390 65.6
Sc18g0005390 Simmondsia chinensis HOM05D006147 ORTHO05D007501 2.0e-131 473.0 332 72.6
Lsat_1_v5_gn_8_127980 Lactuca sativa HOM05D006147 ORTHO05D007501 2.9e-130 469.2 366 68.3
HPP92_002502 Vanilla planifolia HOM05D006147 ORTHO05D007501 1.9e-129 466.5 301 73.1
DCAR_003686 Daucus carota HOM05D006147 ORTHO05D007501 1.6e-128 463.4 279 78.9
Os02g0834700 Oryza sativa ssp. japonica HOM05D006147 ORTHO05D007501 3.0e-127 459.1 312 70.5
ClCG02G004540 Citrullus lanatus HOM05D006147 ORTHO05D007501 1.5e-126 456.8 346 66.8
CDE02G0092 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 5.3e-124 448.4 348 64.1
MELO3C002785.2 Cucumis melo HOM05D006147 ORTHO05D007501 9.4e-121 437.6 297 71.4
Pp3c7_11090 Physcomitrium patens HOM05D006147 ORTHO05D007501 3.6e-120 435.6 311 65.9
Pp3c7_11100 Physcomitrium patens HOM05D006147 ORTHO05D007501 3.6e-120 435.6 311 65.9
Mapoly0021s0030 Marchantia polymorpha HOM05D006147 ORTHO05D007501 4.7e-120 435.3 356 61.0
Nitab4.5_0001154g0060 Nicotiana tabacum HOM05D006147 ORTHO05D007501 2.9e-114 416.0 322 66.8
PSO170G3006 Papaver somniferum HOM05D006147 ORTHO05D007501 4.2e-113 412.1 372 58.3
SMO146G0042 Selaginella moellendorffii HOM05D006147 ORTHO05D007501 4.2e-113 412.1 300 65.0
Zm00001eb259680 Zea mays HOM05D006147 ORTHO05D007501 3.0e-111 406.0 290 69.3
Cc02_g16890 Coffea canephora HOM05D006147 ORTHO05D007501 3.0e-103 379.4 274 69.7
unitig_899.g15602 Utricularia gibba HOM05D006147 ORTHO05D007501 3.0e-103 379.4 279 67.0
Dinv41999 Davidia involucrata HOM05D006147 ORTHO05D007501 6.3e-101 371.7 260 75.0
Cre05.g233305 Chlamydomonas reinhardtii HOM05D006147 ORTHO05D007501 1.3e-93 347.4 357 49.9
MCO05G212 Micromonas commoda HOM05D006147 ORTHO05D007501 1.5e-89 334.0 306 52.9
SGA_v2.0_scaffold80G25875 Striga asiatica HOM05D006147 ORTHO05D007501 1.8e-87 327.0 347 50.7
AUR62040654 Chenopodium quinoa HOM05D006147 ORTHO05D007501 1.8e-84 317.0 374 50.3
Nn6g32256 Nelumbo nucifera HOM05D006147 ORTHO05D007501 1.3e-82 310.8 237 67.5
Nitab4.5_0001370g0020 Nicotiana tabacum HOM05D006147 ORTHO05D007501 3.0e-82 309.7 184 79.3
FvH4_2g10480 Fragaria vesca HOM05D006147 ORTHO05D007501 3.3e-81 306.2 226 67.3
MCO16G248 Micromonas commoda HOM05D006147 ORTHO05D007501 2.9e-77 293.1 309 47.6
PRCOL_00000238 Prasinoderma coloniale HOM05D006147 ORTHO05D007501 3.5e-75 286.2 241 57.7
arahy.Tifrunner.gnm1.ann1.B04QBU Arachis hypogaea HOM05D006147 ORTHO05D007501 9.2e-68 261.5 205 65.9
MELO3C028749.2 Cucumis melo HOM05D006147 ORTHO05D007501 1.0e-66 258.1 244 59.0
Nn4g26316 Nelumbo nucifera HOM05D006147 ORTHO05D007501 2.1e-59 233.8 123 85.4
Nn6g32490 Nelumbo nucifera HOM05D006147 ORTHO05D007501 2.1e-59 233.8 123 85.4
C09p25880 Brassica napus HOM05D006147 ORTHO05D007501 4.2e-52 209.5 122 76.2
BolC9t55495H Brassica oleracea HOM05D006147 ORTHO05D007501 4.2e-52 209.5 122 76.2
arahy.Tifrunner.gnm1.ann1.KZ1FWN Arachis hypogaea HOM05D006147 ORTHO05D007501 1.1e-47 194.9 182 58.8
arahy.Tifrunner.gnm1.ann1.63XKYH Arachis hypogaea HOM05D006147 ORTHO05D007501 5.8e-46 189.1 137 70.1
SEGI_33639 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 4.0e-39 166.4 102 70.6
Pp3s34_200 Physcomitrium patens HOM05D006147 ORTHO05D007501 5.8e-38 162.5 305 33.1
CDE04G1860 Ceratophyllum demersum HOM05D006147 ORTHO05D007501 6.4e-37 159.1 297 36.0
BolC2t08257H Brassica oleracea HOM05D006147 ORTHO05D007501 3.3e-33 146.7 165 52.7
BraA07t28491Z Brassica rapa HOM05D006147 ORTHO05D007501 1.5e-30 137.9 102 66.7
Cc02_g16880 Coffea canephora HOM05D006147 ORTHO05D007501 2.0e-30 137.5 78 80.8
BcaB08g34979 Brassica carinata HOM05D006147 ORTHO05D007501 4.5e-30 136.3 144 55.6
arahy.Tifrunner.gnm1.ann1.PBTS15 Arachis hypogaea HOM05D006147 ORTHO05D007501 7.1e-28 129.0 181 41.4
BcaC03g14677 Brassica carinata HOM05D006147 ORTHO05D007501 2.1e-27 127.5 117 59.0
A07p07030 Brassica napus HOM05D006147 ORTHO05D007501 4.8e-24 116.3 102 59.8
arahy.Tifrunner.gnm1.ann1.UB8UIZ Arachis hypogaea HOM05D006147 ORTHO05D007501 2.4e-23 114.0 114 54.4
C02p21180 Brassica napus HOM05D006147 ORTHO05D007501 4.1e-23 113.2 66 74.2
C02p21170 Brassica napus HOM05D006147 ORTHO05D007501 2.6e-22 110.5 155 45.8
arahy.Tifrunner.gnm1.ann1.U5A9T5 Arachis hypogaea HOM05D000321 ORTHO05D000204 9.4e-20 102.1 181 38.1
Duzib132G0670 Durio zibethinus HOM05D006147 ORTHO05D007501 1.6e-19 101.3 127 49.6
SEGI_01868 Sequoiadendron giganteum HOM05D006147 ORTHO05D007501 1.7e-13 81.3 64 65.6
MBI05_g17912_MAGBIO Magnolia biondii HOM05D006147 ORTHO05D007501 1.1e-12 78.6 45 80.0
MELO3C013418.2 Cucumis melo HOM05D006147 ORTHO05D007501 7.4e-09 65.9 57 59.6


User provided reference genes

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