Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 1.4e-134 483.0 252 100.0
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 5.4e-123 444.5 252 90.9
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 1.2e-122 443.4 252 90.5
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 1.7e-121 439.5 252 87.7
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 5.1e-121 438.0 252 88.1
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 1.1e-120 436.8 252 88.1
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 1.1e-120 436.8 251 87.3
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 1.9e-120 436.0 252 86.9
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 5.6e-120 434.5 250 87.2
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 5.6e-120 434.5 252 88.5
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 7.3e-120 434.1 252 87.7
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 9.5e-120 433.7 252 87.7
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 1.2e-119 433.3 252 88.5
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 1.6e-119 433.0 252 85.3
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 1.6e-119 433.0 252 87.3
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 2.1e-119 432.6 252 87.3
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 2.1e-119 432.6 252 87.7
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 2.1e-119 432.6 252 87.3
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 2.8e-119 432.2 252 88.5
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 2.8e-119 432.2 252 87.3
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 3.6e-119 431.8 252 86.9
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 3.6e-119 431.8 252 86.5
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 6.2e-119 431.0 252 86.1
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 6.2e-119 431.0 252 86.5
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 8.1e-119 430.6 252 86.1
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 1.1e-118 430.3 252 85.7
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 1.8e-118 429.5 252 86.1
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 1.8e-118 429.5 252 86.5
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 1.8e-118 429.5 252 86.9
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.8e-118 429.5 252 84.9
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 2.4e-118 429.1 252 86.9
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 2.4e-118 429.1 252 86.5
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 8.9e-118 427.2 254 86.2
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 1.2e-117 426.8 252 86.1
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 2.0e-117 426.0 252 85.7
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 2.0e-117 426.0 252 86.9
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 2.0e-117 426.0 252 85.7
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 2.0e-117 426.0 252 86.1
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 2.6e-117 425.6 253 86.6
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 2.6e-117 425.6 252 84.5
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 3.4e-117 425.2 252 85.7
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 3.4e-117 425.2 252 86.5
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 5.8e-117 424.5 252 86.1
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 7.6e-117 424.1 252 84.5
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 1.3e-116 423.3 252 85.7
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 1.7e-116 422.9 254 85.4
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 1.7e-116 422.9 252 84.5
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 2.9e-116 422.2 252 84.1
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 2.9e-116 422.2 252 86.5
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 2.9e-116 422.2 252 84.5
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 2.9e-116 422.2 252 84.5
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 3.8e-116 421.8 252 85.3
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 6.4e-116 421.0 252 85.3
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 1.4e-115 419.9 252 86.1
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 1.9e-115 419.5 252 84.5
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 3.2e-115 418.7 252 84.1
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 4.2e-115 418.3 250 83.2
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 9.2e-115 417.2 252 84.1
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 2.7e-114 415.6 252 82.5
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 2.7e-114 415.6 250 82.8
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 6.0e-114 414.5 256 82.4
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 1.0e-113 413.7 256 82.4
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 2.3e-113 412.5 253 79.8
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 3.0e-113 412.1 283 75.3
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 3.9e-113 411.8 248 83.5
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 5.1e-113 411.4 283 76.3
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 8.7e-113 410.6 260 81.2
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 1.1e-112 410.2 253 82.6
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 1.5e-112 409.8 252 82.1
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 2.5e-112 409.1 281 76.2
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 3.3e-112 408.7 252 84.5
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 3.6e-111 405.2 252 79.8
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 8.1e-111 404.1 252 79.0
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 1.1e-110 403.7 252 79.8
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 1.4e-110 403.3 252 80.6
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 4.0e-110 401.7 252 79.0
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 5.3e-110 401.4 252 78.6
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 9.0e-110 400.6 252 78.6
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 3.4e-109 398.7 252 79.0
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 7.6e-109 397.5 239 84.1
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 9.9e-109 397.1 249 79.9
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 2.2e-108 396.0 252 77.8
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 3.8e-108 395.2 249 79.5
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 6.4e-108 394.4 254 78.3
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 2.4e-107 392.5 252 76.6
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 7.1e-107 391.0 249 79.1
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 9.3e-107 390.6 252 79.8
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 2.7e-106 389.0 259 76.8
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 1.1e-104 383.6 256 76.6
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 6.2e-103 377.9 256 74.6
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 5.3e-102 374.8 272 75.4
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 1.7e-100 369.8 252 73.4
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 2.2e-100 369.4 221 84.6
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 3.8e-100 368.6 254 73.6
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 6.7e-97 357.8 267 70.4
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 8.7e-97 357.5 252 71.8
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 8.1e-95 350.9 252 74.2
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 1.1e-94 350.5 252 70.2
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 1.6e-90 336.7 260 69.6
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 1.3e-87 327.0 274 66.8
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 3.1e-86 322.4 191 84.8
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 2.6e-85 319.3 190 84.7
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 1.4e-83 313.5 177 89.8
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 1.6e-82 310.1 177 88.1
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 6.7e-81 304.7 176 85.2
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 5.7e-80 301.6 234 66.7
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 4.8e-79 298.5 252 62.3
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 5.5e-75 285.0 255 58.4
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 6.7e-73 278.1 278 54.7
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 1.7e-68 263.5 145 91.0
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 1.1e-64 250.8 157 82.2
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 4.4e-64 248.8 254 52.8
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 5.7e-64 248.4 252 56.3
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 9.7e-56 221.1 254 48.0
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 2.1e-50 203.4 123 81.3
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 1.6e-37 160.6 96 80.2
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 2.7e-37 159.8 91 84.6
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 2.9e-36 156.4 96 85.4
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 1.0e-28 131.3 83 75.9
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 7.3e-19 98.6 63 74.6
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.6e-13 80.9 48 81.2
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 2.8e-10 70.1 48 68.8
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 1.4e-09 67.8 34 85.3
Actinidia11341 Actinidia chinensis HOM05D006457 ORTHO05D056652 2.4e-06 57.0 37 78.4


User provided reference genes

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