Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G3888 Punica granatum HOM05D007920 ORTHO05D009993 5.7e-59 230.7 118 100.0
Potri.001G046900 Populus trichocarpa HOM05D007920 ORTHO05D009993 4.6e-32 141.4 93 77.4
Sabra01G0032500 Salix brachista HOM05D001994 ORTHO05D001954 1.5e-30 136.3 93 74.2
Cfa000225 Carpinus fangiana HOM05D007920 ORTHO05D009993 3.3e-30 135.2 117 65.8
QL05p035351 Quercus lobata HOM05D007920 ORTHO05D009993 9.6e-30 133.7 87 77.0
Gorai.006G107000 Gossypium raimondii HOM05D007920 ORTHO05D009993 1.6e-29 132.9 106 64.2
Manes.11G065050 Manihot esculenta HOM05D007920 ORTHO05D009993 1.6e-29 132.9 90 76.7
Duzib192G0651 Durio zibethinus HOM05D007920 ORTHO05D009993 3.6e-29 131.7 94 71.3
Gohir.D09G090800 Gossypium hirsutum HOM05D007920 ORTHO05D009993 3.6e-29 131.7 106 63.2
Prupe.3G096700 Prunus persica HOM05D007920 ORTHO05D009993 4.7e-29 131.3 100 68.0
Sp1g14205 Schrenkiella parvula HOM05D007920 ORTHO05D009993 6.2e-29 131.0 88 75.0
Thecc.06G039600 Theobroma cacao HOM05D007920 ORTHO05D009993 1.1e-28 130.2 99 67.7
Gohir.A09G090800 Gossypium hirsutum HOM05D007920 ORTHO05D009993 1.8e-28 129.4 106 62.3
Ciclev10026801m.g Citrus clementina HOM05D007920 ORTHO05D009993 2.4e-28 129.0 87 75.9
MD17G1221700 Malus domestica HOM05D007920 ORTHO05D009993 2.4e-28 129.0 112 66.1
C05p14120 Brassica napus HOM05D000537 ORTHO05D000415 5.2e-28 127.9 88 72.7
BolC5t30143H Brassica oleracea HOM05D000537 ORTHO05D000415 5.2e-28 127.9 88 72.7
Cpa.g.sc10.92 Carica papaya HOM05D007920 ORTHO05D009993 5.2e-28 127.9 88 77.3
BraA06t24364Z Brassica rapa HOM05D000537 ORTHO05D000415 8.9e-28 127.1 88 71.6
CARHR016410 Cardamine hirsuta HOM05D007920 ORTHO05D009993 8.9e-28 127.1 87 73.6
CiPaw.01G253600 Carya illinoinensis HOM05D007920 ORTHO05D009993 1.2e-27 126.7 111 65.8
Carub.0001s1570 Capsella rubella HOM05D007920 ORTHO05D009993 1.5e-27 126.3 87 71.3
CANSAT56G1317 Cannabis sativa HOM05D007920 ORTHO05D009993 2.0e-27 125.9 111 60.4
Thhalv10009838m.g Eutrema salsugineum HOM05D007920 ORTHO05D009993 2.0e-27 125.9 85 72.9
TWI12G0021 Tripterygium wilfordii HOM05D007920 ORTHO05D009993 3.4e-27 125.2 94 67.0
THA.LOC104808181 Tarenaya hassleriana HOM05D007920 ORTHO05D009993 4.4e-27 124.8 91 68.1
A06p11940 Brassica napus HOM05D000537 ORTHO05D000415 9.9e-27 123.6 88 70.5
AT1G15900 Arabidopsis thaliana HOM05D007920 ORTHO05D009993 1.3e-26 123.2 106 62.3
AL1G28072 Arabidopsis lyrata HOM05D007920 ORTHO05D009993 2.2e-26 122.5 106 62.3
Aa31LG7G480 Aethionema arabicum HOM05D007920 ORTHO05D009993 3.8e-26 121.7 87 70.1
Hma1.2p1_0109F.1_g052370 Hydrangea macrophylla HOM05D007920 ORTHO05D009993 4.9e-26 121.3 97 66.0
Sopen03g035960 Solanum pennellii HOM05D007920 ORTHO05D009993 8.4e-26 120.6 121 57.9
FAN02G0847 Fragaria x ananassa HOM05D007920 ORTHO05D009993 1.9e-25 119.4 100 62.0
FAN09G3519 Fragaria x ananassa HOM05D007920 ORTHO05D009993 2.4e-25 119.0 97 63.9
FAN05G5030 Fragaria x ananassa HOM05D007920 ORTHO05D009993 5.4e-25 117.9 97 62.9
Lj5C79G1 Lonicera japonica HOM05D007920 ORTHO05D009993 7.1e-25 117.5 118 58.5
TAR383G1062 Trochodendron aralioides HOM05D007920 ORTHO05D009993 9.3e-25 117.1 119 55.5
Ca_01022_v3 Cicer arietinum L. HOM05D007920 ORTHO05D009993 1.2e-24 116.7 93 62.4
PGSC0003DMG400014190 Solanum tuberosum HOM05D007920 ORTHO05D009993 1.6e-24 116.3 121 56.2
SalBow6G4591 Salvia bowleyana HOM05D007920 ORTHO05D009993 2.7e-24 115.5 120 56.7
MELO3C017832.2 Cucumis melo HOM05D007920 ORTHO05D009993 3.5e-24 115.2 83 67.5
SalBow6G6899 Salvia bowleyana HOM05D007920 ORTHO05D009993 3.5e-24 115.2 90 66.7
SHI00232 Sapria himalayana HOM05D007920 ORTHO05D009993 6.0e-24 114.4 83 68.7
CsaV3_4G002040 Cucumis sativus L. HOM05D001994 ORTHO05D001954 7.8e-24 114.0 83 67.5
Nitab4.5_0012943g0020 Nicotiana tabacum HOM05D007920 ORTHO05D009993 7.8e-24 114.0 118 56.8
Oeu060125.1 Olea europaea HOM05D007920 ORTHO05D009993 1.0e-23 113.6 96 61.5
Psat5g304800 Pisum sativum HOM05D007920 ORTHO05D009993 1.0e-23 113.6 94 58.5
RcHm_v2.0_Chr2g0133221 Rosa chinensis HOM05D007920 ORTHO05D009993 1.0e-23 113.6 84 69.0
FvH4_6g28800 Fragaria vesca HOM05D007920 ORTHO05D009993 1.3e-23 113.2 84 69.0
ClCG00G003920 Citrullus lanatus HOM05D007920 ORTHO05D009993 2.3e-23 112.5 83 65.1
ClCG07G012110 Citrullus lanatus HOM05D007920 ORTHO05D009993 2.3e-23 112.5 83 65.1
Migut.D01101 Erythranthe guttata HOM05D007920 ORTHO05D009993 2.3e-23 112.5 93 63.4
arahy.Tifrunner.gnm1.ann1.D8WECR Arachis hypogaea HOM05D007920 ORTHO05D009993 5.1e-23 111.3 112 56.2
Nitab4.5_0001454g0110 Nicotiana tabacum HOM05D001080 ORTHO05D009993 1.5e-22 109.8 109 56.0
MSTRG.9407 Avicennia marina HOM05D007920 ORTHO05D009993 3.3e-22 108.6 93 61.3
Medtr2g104930 Medicago truncatula HOM05D007920 ORTHO05D009993 3.3e-22 108.6 87 60.9
Sc12g0008420 Simmondsia chinensis HOM05D007920 ORTHO05D009993 4.3e-22 108.2 84 65.5
Lalb_Chr24g0395321 Lupinus albus HOM05D007920 ORTHO05D009993 7.3e-22 107.5 91 61.5
Rhsim12G0188100 Rhododendron simsii HOM05D007920 ORTHO05D009993 7.3e-22 107.5 83 63.9
Nn8g39812 Nelumbo nucifera HOM05D007920 ORTHO05D009993 9.6e-22 107.1 98 58.2
Sed0007883 Sechium edule HOM05D001994 ORTHO05D001954 9.6e-22 107.1 88 58.0
Actinidia36878 Actinidia chinensis HOM05D007920 ORTHO05D009993 2.1e-21 105.9 89 60.7
Lalb_Chr14g0374051 Lupinus albus HOM05D007920 ORTHO05D009993 2.1e-21 105.9 87 65.5
Lj3g0004979 Lotus japonicus HOM05D007920 ORTHO05D009993 3.6e-21 105.1 87 63.2
Lsat_1_v5_gn_4_87000 Lactuca sativa HOM05D007920 ORTHO05D009993 1.8e-20 102.8 120 54.2
HanXRQChr09g0274501 Helianthus annuus HOM05D007920 ORTHO05D009993 2.4e-20 102.4 89 59.6
Glyma.15G004000 Glycine max HOM05D007920 ORTHO05D009993 5.3e-20 101.3 115 53.0
SGA_v2.0_scaffold117G32314 Striga asiatica HOM05D007920 ORTHO05D009993 5.3e-20 101.3 90 56.7
Cc04_g04970 Coffea canephora HOM05D007920 ORTHO05D009993 1.2e-19 100.1 93 58.1
HanXRQChr05g0154421 Helianthus annuus HOM05D007920 ORTHO05D009993 1.5e-19 99.8 89 59.6
VMungo1080G1626 Vigna mungo HOM05D007920 ORTHO05D009993 2.6e-19 99.0 95 57.9
HPP92_000037 Vanilla planifolia HOM05D001122 ORTHO05D001877 7.6e-19 97.4 94 54.3
CSS0007854 Camellia sinensis var. sinensis HOM05D007920 ORTHO05D009993 9.9e-19 97.1 92 57.6
Phvul.005G182500 Phaseolus vulgaris HOM05D007920 ORTHO05D009993 1.3e-18 96.7 95 60.0
ECA232G4957 Erigeron canadensis HOM05D007920 ORTHO05D009993 1.7e-18 96.3 96 53.1
COL.COLO4_26676 Corchorus olitorius HOM05D007920 ORTHO05D009993 8.4e-18 94.0 74 66.2
ATR0559G078 Amborella trichopoda HOM05D007920 ORTHO05D009993 1.4e-17 93.2 102 49.0
unitig_736.g22804 Utricularia gibba HOM05D000537 ORTHO05D000776 5.4e-17 91.3 90 53.3
Ah.01g006840 Amaranthus hybridus HOM05D007920 ORTHO05D009993 1.2e-16 90.1 89 52.8
Aqoxy7G03460 Aquilegia oxysepala HOM05D007920 ORTHO05D009993 1.6e-16 89.7 91 51.6
Sc02g0006940 Simmondsia chinensis HOM05D007920 ORTHO05D009993 3.5e-16 88.6 79 62.0
FAN14G5942 Fragaria x ananassa HOM05D007920 ORTHO05D009993 1.3e-15 86.7 85 56.5
Zm00001eb278260 Zea mays HOM05D007920 ORTHO05D009993 1.8e-15 86.3 82 56.1
TPR.G36324 Trifolium pratense HOM05D007920 ORTHO05D009993 1.8e-12 76.3 76 56.6
Mapoly0046s0029 Marchantia polymorpha HOM05D007920 ORTHO05D009993 6.9e-12 74.3 82 51.2
MD16G1196200 Malus domestica HOM05D007920 ORTHO05D009993 9.0e-12 73.9 87 55.2
SEGI_11378 Sequoiadendron giganteum HOM05D007920 ORTHO05D009993 1.5e-11 73.2 94 47.9
Lsat_1_v5_gn_2_132940 Lactuca sativa HOM05D007920 ORTHO05D009993 9.6e-06 53.9 74 47.3


User provided reference genes

Program Settings