Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 5.9e-122 441.0 250 100.0
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 3.8e-92 342.0 253 76.7
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 6.0e-90 334.7 255 76.5
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 6.0e-90 334.7 245 71.0
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 6.0e-90 334.7 250 74.4
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 7.8e-90 334.3 226 76.5
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 6.6e-89 331.3 249 70.3
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 1.9e-88 329.7 232 76.7
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 9.6e-88 327.4 253 75.1
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 1.6e-87 326.6 249 72.7
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 2.1e-87 326.2 254 67.7
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 2.1e-87 326.2 254 70.5
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 2.1e-87 326.2 206 78.6
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 3.6e-87 325.5 250 68.0
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 6.2e-87 324.7 210 76.2
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 2.4e-86 322.8 184 84.2
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 3.1e-86 322.4 182 84.6
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 3.1e-86 322.4 253 71.5
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 4.0e-86 322.0 253 72.3
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 5.2e-86 321.6 253 68.0
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 6.9e-86 321.2 251 77.3
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 6.9e-86 321.2 254 68.9
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 1.2e-85 320.5 249 67.1
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 1.5e-85 320.1 244 70.9
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 3.4e-85 318.9 220 75.9
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 3.4e-85 318.9 248 69.0
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 4.4e-85 318.5 247 75.3
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 4.4e-85 318.5 247 71.3
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 7.6e-85 317.8 255 65.9
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 7.6e-85 317.8 170 88.8
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 7.6e-85 317.8 209 79.4
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 1.3e-84 317.0 249 68.7
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 1.3e-84 317.0 254 65.7
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 1.7e-84 316.6 248 66.9
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 1.7e-84 316.6 177 81.9
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 1.7e-84 316.6 214 77.6
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 1.7e-84 316.6 214 77.6
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 2.2e-84 316.2 182 84.6
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 2.2e-84 316.2 252 72.6
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 2.2e-84 316.2 250 72.0
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 2.9e-84 315.8 182 83.5
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 4.9e-84 315.1 180 83.3
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 8.4e-84 314.3 214 79.9
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 1.1e-83 313.9 179 83.2
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 1.4e-83 313.5 183 82.5
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 2.4e-83 312.8 258 64.7
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 2.4e-83 312.8 249 69.5
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 5.4e-83 311.6 246 67.5
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 1.2e-82 310.5 173 83.2
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 4.6e-82 308.5 247 69.6
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 6.0e-82 308.1 246 68.7
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 1.0e-81 307.4 178 80.9
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 1.7e-81 306.6 197 76.6
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 2.3e-81 306.2 206 74.3
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 3.9e-81 305.4 198 76.3
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 8.7e-81 304.3 249 72.7
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 1.5e-80 303.5 247 68.0
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 1.5e-80 303.5 218 75.2
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 1.5e-80 303.5 217 72.8
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 1.9e-80 303.1 226 71.7
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 1.9e-80 303.1 249 72.7
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 2.5e-80 302.8 170 82.4
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 3.3e-80 302.4 198 75.8
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 5.6e-80 301.6 248 65.3
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 7.3e-80 301.2 254 71.3
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 1.6e-79 300.1 201 73.1
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 1.6e-79 300.1 169 81.7
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 2.1e-79 299.7 176 80.7
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 2.8e-79 299.3 211 71.1
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 8.1e-79 297.7 247 70.0
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 1.1e-78 297.4 176 79.0
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 2.4e-78 296.2 203 76.4
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 4.0e-78 295.4 179 79.9
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 2.0e-77 293.1 206 70.4
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 2.0e-77 293.1 206 70.4
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 2.6e-77 292.7 250 66.0
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 2.6e-77 292.7 250 66.0
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 2.6e-77 292.7 247 66.0
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 3.4e-77 292.4 206 69.9
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 3.4e-77 292.4 206 69.9
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 7.6e-77 291.2 209 70.3
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 9.9e-77 290.8 203 71.9
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 3.8e-76 288.9 234 63.2
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 4.2e-75 285.4 217 71.0
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 1.8e-73 280.0 178 74.2
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 2.3e-73 279.6 171 77.8
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 2.3e-73 279.6 173 76.9
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 8.7e-73 277.7 251 62.9
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 9.6e-72 274.2 251 64.9
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 1.6e-71 273.5 176 74.4
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 4.5e-69 265.4 178 69.1
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 7.6e-69 264.6 173 74.0
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 7.6e-69 264.6 173 74.0
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 3.8e-68 262.3 214 62.6
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 8.4e-68 261.2 171 70.2
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 8.4e-68 261.2 171 70.2
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 1.1e-67 260.8 185 70.8
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 1.2e-66 257.3 170 73.5
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 2.7e-66 256.1 209 64.1
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 4.6e-66 255.4 152 78.3
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 1.6e-63 246.9 213 65.7
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 2.1e-63 246.5 173 64.7
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 1.4e-62 243.8 169 70.4
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 1.8e-62 243.4 171 66.1
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 2.9e-60 236.1 203 75.4
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 4.9e-60 235.3 140 78.6
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 3.3e-56 222.6 171 61.4
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 4.8e-55 218.8 132 78.8
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 8.2e-47 191.4 120 74.2
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 1.8e-46 190.3 126 70.6
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 4.5e-45 185.7 124 75.0
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 3.1e-38 162.9 105 77.1
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 6.5e-28 128.6 200 37.0
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 1.8e-25 120.6 65 86.2
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 2.2e-23 113.6 181 35.4
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 5.5e-19 99.0 179 35.2
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 8.0e-10 68.6 56 55.4
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 1.1e-06 58.2 186 28.0
MCO12G188 Micromonas commoda HOM05D006848 ORTHO05D008445 1.1e-06 58.2 182 28.6
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 1.1e-06 58.2 152 27.6


User provided reference genes

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