Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 2.6e-40 168.3 89 100.0
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 3.8e-31 137.9 89 79.8
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 1.5e-30 136.0 89 79.8
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 2.5e-30 135.2 89 77.5
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 2.5e-30 135.2 89 77.5
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 5.5e-30 134.0 89 71.9
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 9.4e-30 133.3 87 75.9
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 1.2e-29 132.9 89 77.5
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 1.6e-29 132.5 89 76.4
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 3.6e-29 131.3 87 77.0
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 8.0e-29 130.2 87 75.9
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 1.0e-28 129.8 89 74.2
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 1.4e-28 129.4 89 74.2
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 1.4e-28 129.4 89 73.0
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 3.0e-28 128.3 89 74.2
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 3.0e-28 128.3 89 71.9
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 3.0e-28 128.3 85 75.3
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 4.0e-28 127.9 89 74.2
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 6.7e-28 127.1 89 73.0
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 8.8e-28 126.7 89 71.9
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 8.8e-28 126.7 81 76.5
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 8.8e-28 126.7 88 70.5
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 8.8e-28 126.7 89 75.3
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 8.8e-28 126.7 88 72.7
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 1.2e-27 126.3 89 74.2
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 1.5e-27 125.9 89 71.9
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 1.5e-27 125.9 88 72.7
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 2.0e-27 125.6 88 71.6
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 2.0e-27 125.6 81 77.8
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 2.0e-27 125.6 81 77.8
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 3.3e-27 124.8 90 68.9
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 4.4e-27 124.4 89 71.9
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 5.7e-27 124.0 89 70.8
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 5.7e-27 124.0 88 71.6
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 5.7e-27 124.0 89 73.0
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 5.7e-27 124.0 87 72.4
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 7.5e-27 123.6 89 70.8
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 7.5e-27 123.6 89 70.8
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 7.5e-27 123.6 89 70.8
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 7.5e-27 123.6 88 73.9
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 9.7e-27 123.2 89 68.5
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 9.7e-27 123.2 89 70.8
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 1.3e-26 122.9 88 73.9
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 1.3e-26 122.9 87 72.4
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 2.8e-26 121.7 89 68.5
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 2.8e-26 121.7 89 70.8
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 2.8e-26 121.7 89 68.5
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 3.7e-26 121.3 89 69.7
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 3.7e-26 121.3 89 71.9
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 6.3e-26 120.6 88 71.6
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 6.3e-26 120.6 87 65.5
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 1.1e-25 119.8 88 68.2
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 1.1e-25 119.8 87 69.0
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 1.4e-25 119.4 87 72.4
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 1.4e-25 119.4 88 68.2
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 2.4e-25 118.6 81 70.4
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 7.0e-25 117.1 102 61.8
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 7.0e-25 117.1 89 68.5
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 9.1e-25 116.7 89 66.3
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 9.1e-25 116.7 89 69.7
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 9.1e-25 116.7 89 67.4
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 1.6e-24 115.9 89 68.5
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 2.0e-24 115.5 89 66.3
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 3.5e-24 114.8 88 68.2
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 4.5e-24 114.4 123 53.7
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 1.0e-23 113.2 87 63.2
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 1.7e-23 112.5 87 66.7
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 2.2e-23 112.1 89 61.8
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 2.9e-23 111.7 81 70.4
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 8.5e-23 110.2 88 64.8
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 8.5e-23 110.2 87 63.2
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 1.1e-22 109.8 87 59.8
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 1.1e-22 109.8 87 59.8
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 1.1e-22 109.8 87 59.8
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 4.2e-22 107.8 87 60.9
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 4.2e-22 107.8 87 58.6
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 4.2e-22 107.8 87 58.6
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 7.2e-22 107.1 95 64.2
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 1.2e-21 106.3 87 60.9
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 1.2e-21 106.3 83 67.5
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 1.6e-21 105.9 87 58.6
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 2.7e-21 105.1 155 45.2
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 2.7e-21 105.1 155 45.2
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 2.7e-21 105.1 87 59.8
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 4.7e-21 104.4 87 57.5
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 4.7e-21 104.4 87 57.5
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 4.7e-21 104.4 83 66.3
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 6.1e-21 104.0 87 57.5
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 8.0e-21 103.6 82 65.9
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 1.4e-20 102.8 115 53.0
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 2.3e-20 102.1 124 48.4
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 4.0e-20 101.3 83 68.7
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 6.8e-20 100.5 87 55.2
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 6.8e-20 100.5 87 58.6
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 1.2e-19 99.8 87 55.2
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 1.7e-18 95.9 71 67.6
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 7.0e-17 90.5 60 76.7
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 2.0e-16 89.0 59 72.9
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 8.6e-15 83.6 58 74.1
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 3.3e-14 81.6 196 32.7
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 3.3e-14 81.6 66 60.6
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 2.1e-13 79.0 77 57.1
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 6.1e-13 77.4 55 72.7
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 8.0e-13 77.0 77 57.1
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 3.0e-12 75.1 77 55.8
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 8.9e-12 73.6 49 73.5
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 1.5e-11 72.8 48 72.9
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 1.7e-10 69.3 48 68.8
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 6.3e-10 67.4 48 66.7
Cc00_g26940 Coffea canephora HOM05D007133 ORTHO05D008954 1.4e-09 66.2 54 70.4
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 1.8e-09 65.9 42 78.6


User provided reference genes

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