Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 3.6e-140 501.5 245 100.0
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 1.4e-104 383.3 243 76.5
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 1.6e-103 379.8 248 74.6
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 2.7e-103 379.0 249 72.7
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 3.5e-103 378.6 243 77.0
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 1.0e-102 377.1 248 74.6
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 1.8e-102 376.3 244 74.6
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 1.5e-101 373.2 243 74.1
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 4.3e-101 371.7 244 74.2
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 5.7e-101 371.3 248 74.2
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 1.3e-100 370.2 243 73.7
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 1.3e-100 370.2 251 72.1
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 2.1e-100 369.4 248 72.6
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 3.7e-100 368.6 240 73.8
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 4.8e-100 368.2 244 72.5
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 6.3e-100 367.9 246 72.8
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 8.2e-100 367.5 247 72.9
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 8.2e-100 367.5 241 73.9
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 1.4e-99 366.7 244 74.2
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 1.8e-99 366.3 244 73.4
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 2.4e-99 365.9 248 72.6
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 2.4e-99 365.9 245 73.5
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 4.1e-99 365.2 241 72.6
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 6.9e-99 364.4 244 73.8
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 6.9e-99 364.4 238 74.4
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 6.9e-99 364.4 245 71.8
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 1.2e-98 363.6 246 71.5
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.5e-98 363.2 245 72.2
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 3.4e-98 362.1 245 71.4
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 4.5e-98 361.7 244 74.2
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 1.3e-97 360.1 247 69.2
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 1.3e-97 360.1 246 71.1
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 1.7e-97 359.8 245 71.8
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 2.9e-97 359.0 244 71.3
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 2.9e-97 359.0 243 71.6
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 2.9e-97 359.0 245 71.0
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 3.8e-97 358.6 241 71.0
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 3.8e-97 358.6 245 71.0
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 5.0e-97 358.2 279 64.9
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 6.5e-97 357.8 241 73.4
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 8.5e-97 357.5 254 69.7
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 8.5e-97 357.5 247 69.6
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 1.1e-96 357.1 244 70.1
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 1.1e-96 357.1 242 72.3
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 2.5e-96 355.9 243 70.0
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 2.5e-96 355.9 247 70.0
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 3.2e-96 355.5 244 70.9
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 7.2e-96 354.4 247 69.6
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 7.2e-96 354.4 245 70.6
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 2.1e-95 352.8 242 69.8
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 2.1e-95 352.8 243 70.0
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 2.1e-95 352.8 259 68.3
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 2.7e-95 352.4 222 75.7
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 4.6e-95 351.7 247 68.8
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 6.1e-95 351.3 247 68.8
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 7.9e-95 350.9 256 67.6
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 1.0e-94 350.5 244 69.3
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 2.3e-94 349.4 247 68.4
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 2.3e-94 349.4 244 70.5
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 6.7e-94 347.8 246 68.3
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 1.1e-93 347.1 250 68.0
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 1.1e-93 347.1 246 68.3
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 1.1e-93 347.1 248 69.4
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 1.1e-93 347.1 246 69.5
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 4.3e-93 345.1 303 60.7
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 1.3e-92 343.6 244 67.2
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 3.7e-92 342.0 239 69.0
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 3.7e-92 342.0 238 69.7
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 8.2e-92 340.9 240 67.9
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 5.9e-90 334.7 243 70.8
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 5.0e-89 331.6 239 65.7
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 2.5e-88 329.3 244 66.8
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 7.2e-88 327.8 254 61.8
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 3.6e-87 325.5 232 66.8
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 9.7e-85 317.4 202 75.2
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 1.1e-83 313.9 248 66.5
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 4.5e-82 308.5 192 76.6
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 7.7e-82 307.8 242 64.0
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 1.0e-81 307.4 267 58.1
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 1.3e-81 307.0 186 80.1
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 9.4e-80 300.8 300 53.7
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 2.7e-79 299.3 284 54.9
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 2.3e-78 296.2 177 80.2
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 3.9e-78 295.4 254 57.5
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 7.4e-77 291.2 252 59.9
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 8.2e-76 287.7 180 75.6
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 1.8e-75 286.6 248 58.5
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 2.6e-74 282.7 246 60.6
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 8.0e-71 271.2 180 73.3
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 6.7e-70 268.1 251 58.2
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 1.2e-69 267.3 272 52.2
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 5.7e-69 265.0 269 52.4
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 8.2e-68 261.2 213 59.6
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 9.1e-67 257.7 290 51.7
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 3.8e-65 252.3 283 48.1
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 1.5e-64 250.4 208 59.1
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 1.3e-57 227.3 250 48.8
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 1.8e-51 206.8 136 72.8
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 1.6e-50 203.8 209 51.2
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 2.7e-50 203.0 138 70.3
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 4.1e-43 179.1 118 70.3
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 4.6e-26 122.5 87 71.3
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 9.5e-24 114.8 95 60.0
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 8.1e-23 111.7 85 62.4
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 3.0e-09 66.6 40 65.0
SMO307G0066 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 6.2e-07 58.9 177 24.3
Oeu041446.1 Olea europaea HOM05D005677 ORTHO05D006966 5.3e-06 55.8 205 28.3


User provided reference genes

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