Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G3591 Punica granatum HOM05D007238 ORTHO05D009206 6.5e-239 830.5 465 100.0
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 6.0e-144 515.0 432 65.7
Eucgr.D02592 Eucalyptus grandis HOM05D007238 ORTHO05D009206 6.6e-143 511.5 434 65.2
Potri.001G130800 Populus trichocarpa HOM05D007238 ORTHO05D009206 4.8e-141 505.4 435 66.2
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 1.8e-140 503.4 434 66.1
GSVIVG01022787001 Vitis vinifera HOM05D007238 ORTHO05D009206 1.3e-138 497.3 434 65.2
Ciclev10000885m.g Citrus clementina HOM05D007238 ORTHO05D009206 1.9e-137 493.4 445 62.7
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 2.4e-137 493.0 434 63.8
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 6.7e-135 485.0 434 64.5
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 7.4e-134 481.5 435 63.2
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 6.2e-133 478.4 434 63.8
Cfa012591 Carpinus fangiana HOM05D007238 ORTHO05D009206 1.1e-132 477.6 433 62.8
CSS0038403 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 1.0e-130 471.1 434 62.2
CiPaw.12G071800 Carya illinoinensis HOM05D007238 ORTHO05D009206 8.4e-130 468.0 433 60.5
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 3.2e-129 466.1 436 62.4
Manes.17G003400 Manihot esculenta HOM05D007238 ORTHO05D009206 5.5e-129 465.3 433 63.0
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 1.8e-127 460.3 434 62.4
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 1.8e-127 460.3 435 61.1
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 5.1e-127 458.8 434 62.2
RcHm_v2.0_Chr7g0213421 Rosa chinensis HOM05D007238 ORTHO05D009206 8.2e-125 451.4 433 61.2
FvH4_5g23980 Fragaria vesca HOM05D007238 ORTHO05D009206 9.0e-124 448.0 433 60.0
CANSAT21G2527 Cannabis sativa HOM05D007238 ORTHO05D009206 1.5e-123 447.2 433 59.4
FAN13G1136 Fragaria x ananassa HOM05D007238 ORTHO05D009206 2.6e-123 446.4 433 59.8
Duzib205G0751 Durio zibethinus HOM05D007238 ORTHO05D009206 3.4e-123 446.0 473 57.1
TWI56G0348 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 2.1e-120 436.8 436 59.6
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 1.5e-118 430.6 437 59.0
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.9e-118 430.3 434 59.0
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 5.7e-118 428.7 421 59.9
Cc08_g05060 Coffea canephora HOM05D007238 ORTHO05D009206 1.3e-117 427.6 426 58.2
CsaV3_3G001050 Cucumis sativus L. HOM05D007238 ORTHO05D009206 1.4e-116 424.1 432 59.7
MD00G1002000 Malus domestica HOM05D007238 ORTHO05D009206 1.8e-116 423.7 435 59.5
FAN18G0294 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.5e-115 420.6 493 52.7
Sed0015204 Sechium edule HOM05D007238 ORTHO05D009206 2.0e-115 420.2 431 59.2
FAN08G1858 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.3e-114 417.5 493 52.5
FAN18G2161 Fragaria x ananassa HOM05D007238 ORTHO05D009206 1.7e-114 417.2 494 52.6
Oeu046801.1 Olea europaea HOM05D007238 ORTHO05D009206 1.4e-113 414.1 433 57.0
Rhsim11G0025000 Rhododendron simsii HOM05D007238 ORTHO05D009206 1.2e-112 411.0 456 55.5
Nitab4.5_0002930g0030 Nicotiana tabacum HOM05D007238 ORTHO05D009206 1.6e-112 410.6 435 58.4
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 3.6e-112 409.5 434 57.4
MD06G1015600 Malus domestica HOM05D007238 ORTHO05D009206 3.0e-111 406.4 432 58.1
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 1.1e-110 404.4 498 51.4
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.7e-109 400.6 433 55.4
MELO3C013794.2 Cucumis melo HOM05D007238 ORTHO05D009206 1.1e-108 397.9 351 64.7
Solyc08g075760.3 Solanum lycopersicum HOM05D007238 ORTHO05D009206 1.1e-108 397.9 433 55.4
Nitab4.5_0000030g0130 Nicotiana tabacum HOM05D007238 ORTHO05D009206 1.4e-108 397.5 437 57.0
Sopen08g024410 Solanum pennellii HOM05D007238 ORTHO05D009206 4.1e-108 396.0 433 55.2
Lj2g0008424 Lotus japonicus HOM05D007238 ORTHO05D009206 5.5e-105 385.6 430 56.5
CAN.G1363.6 Capsicum annuum HOM05D007238 ORTHO05D009206 3.9e-103 379.4 422 54.7
FAN04G0931 Fragaria x ananassa HOM05D007238 ORTHO05D009206 8.8e-103 378.3 417 55.9
PGSC0003DMG400030852 Solanum tuberosum HOM05D007238 ORTHO05D009206 8.8e-103 378.3 433 54.0
arahy.Tifrunner.gnm1.ann1.0046K4 Arachis hypogaea HOM05D007238 ORTHO05D009206 3.3e-102 376.3 441 55.8
arahy.Tifrunner.gnm1.ann1.BJTL8K Arachis hypogaea HOM05D007238 ORTHO05D009206 3.3e-102 376.3 441 55.8
ClCG10G001020 Citrullus lanatus HOM05D007238 ORTHO05D009206 3.3e-102 376.3 419 56.1
DCAR_004239 Daucus carota HOM05D007238 ORTHO05D009206 3.3e-102 376.3 436 54.4
TPR.G17266 Trifolium pratense HOM05D007238 ORTHO05D009206 4.4e-102 375.9 435 55.2
Medtr5g026850 Medicago truncatula HOM05D007238 ORTHO05D009206 2.2e-101 373.6 438 54.3
Lalb_Chr05g0215441 Lupinus albus HOM05D007238 ORTHO05D009206 4.8e-101 372.5 431 55.7
Phvul.002G128600 Phaseolus vulgaris HOM05D007238 ORTHO05D009206 3.1e-100 369.8 434 55.5
VMungo1215G3455 Vigna mungo HOM05D007238 ORTHO05D009206 5.3e-100 369.0 432 56.0
Glyma.09G213700 Glycine max HOM05D007238 ORTHO05D009206 3.5e-99 366.3 434 54.4
Ca_25102_v3 Cicer arietinum L. HOM05D007238 ORTHO05D009206 3.8e-98 362.8 416 56.0
Glyma.01G149500 Glycine max HOM05D007238 ORTHO05D009206 1.5e-97 360.9 435 54.7
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 4.0e-95 352.8 420 53.8
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 2.2e-93 347.1 433 53.1
PSO063G0400 Papaver somniferum HOM05D007238 ORTHO05D009206 6.3e-93 345.5 441 52.8
ECA233G5138 Erigeron canadensis HOM05D007238 ORTHO05D009206 1.4e-92 344.4 435 50.6
vmacro00062 Vaccinium macrocarpon HOM05D007238 ORTHO05D009206 8.5e-90 335.1 370 57.0
Peaxi162Scf02295g00022 Petunia axillaris HOM05D007238 ORTHO05D009206 2.7e-88 330.1 414 51.2
Lsat_1_v5_gn_3_92801 Lactuca sativa HOM05D007238 ORTHO05D009206 3.0e-87 326.6 435 49.4
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 5.2e-87 325.9 381 52.5
PSO782G1267 Papaver somniferum HOM05D007238 ORTHO05D009206 5.7e-86 322.4 419 51.3
Migut.E01348 Erythranthe guttata HOM05D007238 ORTHO05D009206 3.7e-85 319.7 437 49.7
SalBow8G0140 Salvia bowleyana HOM05D007238 ORTHO05D009206 4.1e-84 316.2 418 51.9
ATR0829G060 Amborella trichopoda HOM05D007238 ORTHO05D009206 4.5e-83 312.8 439 48.1
Cpa.g.sc90.44 Carica papaya HOM05D007238 ORTHO05D009206 4.2e-81 306.2 323 57.0
Os06g0115600 Oryza sativa ssp. japonica HOM05D007238 ORTHO05D009206 1.2e-75 288.1 422 46.2
Zm00001eb378870 Zea mays HOM05D007238 ORTHO05D009206 1.8e-71 274.2 423 46.8
Zm00001eb269110 Zea mays HOM05D007238 ORTHO05D009206 7.8e-67 258.8 437 43.7
Psat2g142200 Pisum sativum HOM05D007238 ORTHO05D009206 3.4e-62 243.4 320 49.1
PSO782G4691 Papaver somniferum HOM05D007238 ORTHO05D009206 4.9e-53 213.0 322 45.7
Hma1.2p1_1933F.1_g308070 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 1.9e-52 211.1 196 61.2
HanXRQChr03g0081161 Helianthus annuus HOM05D007238 ORTHO05D009206 9.2e-44 182.2 315 42.9
HPP92_002457 Vanilla planifolia HOM05D000907 ORTHO05D000753 2.6e-38 164.1 227 49.8
SEGI_10751 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 1.9e-28 131.3 313 38.7
Duzib068G0324 Durio zibethinus HOM05D007238 ORTHO05D009206 2.1e-24 117.9 78 82.1
HPP92_022728 Vanilla planifolia HOM05D007238 ORTHO05D009206 9.0e-23 112.5 195 41.0
SEGI_32460 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 2.9e-21 107.5 75 80.0
HPP92_025938 Vanilla planifolia HOM05D007238 ORTHO05D009206 5.5e-20 103.2 202 42.1
HanXRQChr17g0554671 Helianthus annuus HOM05D007238 ORTHO05D009206 2.7e-19 100.9 156 46.2
Pp3c23_22500 Physcomitrium patens HOM05D007238 ORTHO05D009206 7.4e-17 92.8 469 29.2
CSS0023317 Camellia sinensis var. sinensis HOM05D007238 ORTHO05D009206 3.7e-16 90.5 53 88.7
AagrBONN_evm.TU.Sc2ySwM_228.587 Anthoceros agrestis HOM05D007238 ORTHO05D009206 5.5e-12 76.6 194 39.2
arahy.Tifrunner.gnm1.ann1.DKTU9V Arachis hypogaea HOM05D007238 ORTHO05D009206 7.1e-12 76.3 286 30.4
Actinidia14160 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.0e-10 72.4 44 84.1
HanXRQChr09g0247011 Helianthus annuus HOM05D007238 ORTHO05D009206 5.7e-09 66.6 36 88.9
SEGI_26764 Sequoiadendron giganteum HOM05D007238 ORTHO05D009206 1.3e-08 65.5 102 46.1
HanXRQChr03g0081151 Helianthus annuus HOM05D007238 ORTHO05D009206 1.8e-07 61.6 49 69.4
arahy.Tifrunner.gnm1.ann1.HBQ3NA Arachis hypogaea HOM05D007238 ORTHO05D009206 4.1e-07 60.5 58 62.1
arahy.Tifrunner.gnm1.ann1.M9N5E0 Arachis hypogaea HOM05D007238 ORTHO05D009206 4.1e-07 60.5 58 62.1


User provided reference genes

Program Settings