Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G3479 Punica granatum HOM05D004884 ORTHO05D005873 1.3e-79 299.7 148 100.0
MD17G1208900 Malus domestica HOM05D004884 ORTHO05D005873 3.4e-77 291.6 148 96.6
Prupe.3G084300 Prunus persica HOM05D004884 ORTHO05D005873 4.5e-77 291.2 148 96.6
THA.LOC104808231 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 5.9e-77 290.8 148 95.9
QL05p029075 Quercus lobata HOM05D004884 ORTHO05D005873 1.7e-76 289.3 147 95.2
THA.LOC104812503 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 1.7e-76 289.3 148 93.9
RcHm_v2.0_Chr2g0135941 Rosa chinensis HOM05D004884 ORTHO05D005873 3.8e-76 288.1 148 94.6
Glyma.08G211500 Glycine max HOM05D004884 ORTHO05D005873 8.5e-76 287.0 148 94.6
VMungo0331G0880 Vigna mungo HOM05D004884 ORTHO05D005873 8.5e-76 287.0 148 94.6
Phvul.010G154800 Phaseolus vulgaris HOM05D004884 ORTHO05D005873 1.9e-75 285.8 148 93.9
Dinv30589 Davidia involucrata HOM05D004884 ORTHO05D005873 5.5e-75 284.3 146 93.8
ECA240G3509 Erigeron canadensis HOM05D004884 ORTHO05D005873 5.5e-75 284.3 148 93.2
Lj3g0000080 Lotus japonicus HOM05D004884 ORTHO05D005873 5.5e-75 284.3 148 92.6
Psat5g301920 Pisum sativum HOM05D004884 ORTHO05D005873 5.5e-75 284.3 148 93.2
Lalb_Chr04g0262431 Lupinus albus HOM05D004884 ORTHO05D005873 9.4e-75 283.5 148 92.6
Carub.0001s1514 Capsella rubella HOM05D004884 ORTHO05D005873 1.2e-74 283.1 148 89.9
Glyma.07G031300 Glycine max HOM05D004884 ORTHO05D005873 1.2e-74 283.1 148 93.9
CAN.G407.94 Capsicum annuum HOM05D004884 ORTHO05D005873 1.6e-74 282.7 148 90.5
AL1G27470 Arabidopsis lyrata HOM05D004884 ORTHO05D005873 2.1e-74 282.3 146 91.1
AT1G15370 Arabidopsis thaliana HOM05D004884 ORTHO05D005873 2.1e-74 282.3 146 91.1
FvH4_6g29940 Fragaria vesca HOM05D004884 ORTHO05D005873 2.1e-74 282.3 148 93.2
FAN14G1538 Fragaria x ananassa HOM05D004884 ORTHO05D005873 2.1e-74 282.3 148 93.2
Lsat_1_v5_gn_1_2440 Lactuca sativa HOM05D004884 ORTHO05D005873 2.7e-74 282.0 148 91.9
ECA247G2927 Erigeron canadensis HOM05D001354 ORTHO05D002582 3.6e-74 281.6 148 92.6
Sopen03g035510 Solanum pennellii HOM05D004884 ORTHO05D005873 3.6e-74 281.6 148 89.9
Lalb_Chr22g0350881 Lupinus albus HOM05D004884 ORTHO05D005873 4.7e-74 281.2 148 92.6
Medtr2g103690 Medicago truncatula HOM05D004884 ORTHO05D005873 4.7e-74 281.2 148 92.6
Solyc03g116600.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 4.7e-74 281.2 148 89.9
CARHR015900 Cardamine hirsuta HOM05D004884 ORTHO05D005873 6.1e-74 280.8 146 90.4
FAN09G2574 Fragaria x ananassa HOM05D004884 ORTHO05D005873 6.1e-74 280.8 148 92.6
Sp1g13700 Schrenkiella parvula HOM05D004884 ORTHO05D005873 6.1e-74 280.8 148 89.9
BcaB03g14545 Brassica carinata HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 89.9
BcaC05g25475 Brassica carinata HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 89.9
BcaC05g25490 Brassica carinata HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 89.9
A06p11400 Brassica napus HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 89.9
A09p61460 Brassica napus HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 89.9
C05p13510 Brassica napus HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 89.9
C08p45030 Brassica napus HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 89.9
BolC5t30088H Brassica oleracea HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 89.9
BraA06t24317Z Brassica rapa HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 89.9
BraA09t41517Z Brassica rapa HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 89.9
Thhalv10009024m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 89.9
Hma1.2p1_0515F.1_g170110 Hydrangea macrophylla HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 91.2
Solyc06g068080.4 Solanum lycopersicum HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 90.5
Sopen06g025360 Solanum pennellii HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 90.5
PGSC0003DMG400028511 Solanum tuberosum HOM05D004884 ORTHO05D005873 7.9e-74 280.4 148 90.5
Eucgr.F02527 Eucalyptus grandis HOM05D004884 ORTHO05D005873 1.0e-73 280.0 148 91.2
HanXRQChr02g0046821 Helianthus annuus HOM05D004884 ORTHO05D005873 1.0e-73 280.0 148 91.2
FAN02G1988 Fragaria x ananassa HOM05D004884 ORTHO05D005873 1.4e-73 279.6 148 92.6
PGSC0003DMG400000635 Solanum tuberosum HOM05D004884 ORTHO05D005873 1.4e-73 279.6 148 89.2
COL.COLO4_12946 Corchorus olitorius HOM05D004884 ORTHO05D005873 1.8e-73 279.3 148 91.2
BcaC07g41506 Brassica carinata HOM05D004884 ORTHO05D005873 3.0e-73 278.5 148 89.2
BolC8t52049H Brassica oleracea HOM05D004884 ORTHO05D005873 3.0e-73 278.5 148 89.2
Ciclev10026708m.g Citrus clementina HOM05D004884 ORTHO05D005873 3.0e-73 278.5 148 92.6
Cc04_g04240 Coffea canephora HOM05D004884 ORTHO05D005873 3.0e-73 278.5 148 91.9
Oeu045160.1 Olea europaea HOM05D004884 ORTHO05D005873 3.0e-73 278.5 148 91.2
SalBow3G1656 Salvia bowleyana HOM05D004884 ORTHO05D005873 3.0e-73 278.5 148 91.9
GSVIVG01017313001 Vitis vinifera HOM05D004884 ORTHO05D005873 3.0e-73 278.5 148 90.5
MSTRG.9432 Avicennia marina HOM05D004884 ORTHO05D005873 5.1e-73 277.7 148 90.5
CiPaw.08G011500 Carya illinoinensis HOM05D004884 ORTHO05D005873 5.1e-73 277.7 147 89.1
SGA_v2.0_scaffold117G32369 Striga asiatica HOM05D004884 ORTHO05D005873 5.1e-73 277.7 148 91.9
Atru.chr1.2995 Acer truncatum HOM05D004884 ORTHO05D005873 8.8e-73 276.9 148 91.9
CSS0003587 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 1.1e-72 276.6 146 91.1
Oeu052257.1 Olea europaea HOM05D004884 ORTHO05D005873 1.1e-72 276.6 148 90.5
Thecc.06G021400 Theobroma cacao HOM05D004884 ORTHO05D005873 1.1e-72 276.6 148 89.9
Migut.D01065 Erythranthe guttata HOM05D004884 ORTHO05D005873 1.5e-72 276.2 148 90.5
Gohir.D10G076700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 2.0e-72 275.8 148 91.2
Manes.04G114100 Manihot esculenta HOM05D004884 ORTHO05D005873 2.6e-72 275.4 146 91.8
ClCG05G016940 Citrullus lanatus HOM05D004884 ORTHO05D005873 4.4e-72 274.6 148 89.2
MELO3C003694.2 Cucumis melo HOM05D004884 ORTHO05D005873 4.4e-72 274.6 148 89.2
Peaxi162Scf00207g00728 Petunia axillaris HOM05D004884 ORTHO05D005873 5.7e-72 274.2 148 89.9
Rhsim10G0061400 Rhododendron simsii HOM05D004884 ORTHO05D005873 5.7e-72 274.2 146 88.4
Actinidia18100 Actinidia chinensis HOM05D004884 ORTHO05D005873 7.4e-72 273.9 146 89.0
Thhalv10019295m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 7.4e-72 273.9 148 87.8
Potri.001G193100 Populus trichocarpa HOM05D004884 ORTHO05D005873 7.4e-72 273.9 148 88.5
Sabra01G0135700 Salix brachista HOM05D004884 ORTHO05D005873 7.4e-72 273.9 148 88.5
Aqoxy1G02408 Aquilegia oxysepala HOM05D004884 ORTHO05D005873 9.7e-72 273.5 146 90.4
CsaV3_3G046450 Cucumis sativus L. HOM05D004884 ORTHO05D005873 9.7e-72 273.5 148 88.5
vmacro20098 Vaccinium macrocarpon HOM05D004884 ORTHO05D005873 9.7e-72 273.5 148 88.5
Duzib235G0621 Durio zibethinus HOM05D004884 ORTHO05D005873 1.3e-71 273.1 148 89.2
FAN05G0038 Fragaria x ananassa HOM05D004884 ORTHO05D005873 3.7e-71 271.6 168 82.1
PSO455G0277 Papaver somniferum HOM05D004884 ORTHO05D005873 6.3e-71 270.8 148 87.8
Gohir.A10G074700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 8.2e-71 270.4 148 89.9
Sed0027624 Sechium edule HOM05D004884 ORTHO05D005873 1.4e-70 269.6 148 87.2
Cfa013154 Carpinus fangiana HOM05D004884 ORTHO05D005873 2.4e-70 268.9 148 85.8
PSO170G2441 Papaver somniferum HOM05D004884 ORTHO05D005873 2.4e-70 268.9 148 87.2
QL02p021869 Quercus lobata HOM05D004884 ORTHO05D005873 2.4e-70 268.9 147 85.7
unitig_747.g21296 Utricularia gibba HOM05D004884 ORTHO05D005873 2.4e-70 268.9 148 85.1
TWI75G0638 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 1.5e-69 266.2 148 85.1
AUR62012381 Chenopodium quinoa HOM05D004884 ORTHO05D005873 2.6e-69 265.4 148 84.5
MBI04_g07835_MAGBIO Magnolia biondii HOM05D004884 ORTHO05D005873 2.6e-69 265.4 146 87.0
TAR636G0424 Trochodendron aralioides HOM05D004884 ORTHO05D005873 5.9e-69 264.2 146 85.6
CDE04G3015 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 2.2e-68 262.3 146 85.6
Nn2g12037 Nelumbo nucifera HOM05D004884 ORTHO05D005873 3.8e-68 261.5 148 84.5
Nitab4.5_0013106g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 3.8e-68 261.5 139 90.6
Zm00001eb064920 Zea mays HOM05D004884 ORTHO05D005873 1.9e-67 259.2 146 85.6
Glyma.15G008700 Glycine max HOM05D004884 ORTHO05D005873 5.5e-67 257.7 130 94.6
Solyc11g008330.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 1.6e-66 256.1 148 83.1
Aa31LG4G430 Aethionema arabicum HOM05D004884 ORTHO05D005873 2.1e-66 255.8 133 91.0
TWI34G0752 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 2.7e-66 255.4 148 79.7
Sed0022166 Sechium edule HOM05D004884 ORTHO05D005873 3.6e-66 255.0 140 86.4
EL10Ac2g04219 Beta vulgaris HOM05D004884 ORTHO05D005873 4.7e-66 254.6 158 77.2
CSS0011163 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 2.8e-63 245.4 129 89.1
Gohir.D06G099800 Gossypium hirsutum HOM05D004884 ORTHO05D005873 2.8e-63 245.4 144 79.2
AUR62031521 Chenopodium quinoa HOM05D004884 ORTHO05D005873 1.8e-62 242.7 198 63.1
Gorai.010G114700 Gossypium raimondii HOM05D004884 ORTHO05D005873 1.8e-62 242.7 144 77.8
arahy.Tifrunner.gnm1.ann1.Q10AU9 Arachis hypogaea HOM05D004884 ORTHO05D005873 7.0e-62 240.7 123 95.1
arahy.Tifrunner.gnm1.ann1.W4DERE Arachis hypogaea HOM05D004884 ORTHO05D005873 7.0e-62 240.7 123 95.1
ATR1120G077 Amborella trichopoda HOM05D004884 ORTHO05D005873 1.6e-61 239.6 135 82.2
Nitab4.5_0001764g0110 Nicotiana tabacum HOM05D004884 ORTHO05D005873 1.0e-60 236.9 124 91.9
Dinv38109 Davidia involucrata HOM05D000250 ORTHO05D002477 1.7e-60 236.1 123 91.9
Peaxi162Scf00332g00767 Petunia axillaris HOM05D004884 ORTHO05D005873 1.5e-59 233.0 130 88.5
Gorai.011G082800 Gossypium raimondii HOM05D004884 ORTHO05D005873 2.5e-59 232.3 123 92.7
EL10Ac9g22900 Beta vulgaris HOM05D004884 ORTHO05D005873 5.5e-59 231.1 148 75.7
Actinidia36285 Actinidia chinensis HOM05D004884 ORTHO05D005873 1.6e-58 229.6 123 88.6
SalBow6G6988 Salvia bowleyana HOM05D004884 ORTHO05D005873 1.6e-58 229.6 122 92.6
AUR62012868 Chenopodium quinoa HOM05D004884 ORTHO05D005873 1.8e-57 226.1 146 74.0
SMO143G0054 Selaginella moellendorffii HOM05D004884 ORTHO05D005873 1.8e-57 226.1 146 73.3
Sc23g0006790 Simmondsia chinensis HOM05D004884 ORTHO05D005873 4.0e-57 224.9 123 86.2
Nitab4.5_0006187g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 5.2e-57 224.6 130 81.5
Peaxi162Scf00145g01210 Petunia axillaris HOM05D004884 ORTHO05D005873 8.2e-55 217.2 130 78.5
Sabra06G0198100 Salix brachista HOM05D004884 ORTHO05D005873 3.1e-54 215.3 123 80.5
Pp3c18_11860 Physcomitrium patens HOM05D004884 ORTHO05D005873 4.5e-53 211.5 146 67.1
CAN.G321.60 Capsicum annuum HOM05D004884 ORTHO05D005873 5.9e-53 211.1 121 81.0
Potri.006G253700 Populus trichocarpa HOM05D004884 ORTHO05D005873 1.5e-51 206.5 148 68.2
AagrBONN_evm.TU.Sc2ySwM_368.2705 Anthoceros agrestis HOM05D004884 ORTHO05D005873 2.3e-49 199.1 145 64.8
CDE06G1547 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 1.2e-48 196.8 118 79.7
Mapoly0005s0226 Marchantia polymorpha HOM05D004884 ORTHO05D005873 2.8e-47 192.2 146 58.9
QL05p029040 Quercus lobata HOM05D004884 ORTHO05D005873 1.0e-44 183.7 113 79.6
BcaC07g41508 Brassica carinata HOM05D004884 ORTHO05D005873 3.6e-42 175.3 119 73.9
Gorai.001G184900 Gossypium raimondii HOM05D004884 ORTHO05D005873 4.0e-41 171.8 148 63.5
Sopen11g004140 Solanum pennellii HOM05D004884 ORTHO05D005873 4.0e-41 171.8 148 62.8
Gohir.D07G161600 Gossypium hirsutum HOM05D004884 ORTHO05D005873 5.7e-40 167.9 148 62.8
Nitab4.5_0005235g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 3.7e-39 165.2 119 68.1
CBR_g8585 Chara braunii HOM05D004884 ORTHO05D005873 9.2e-38 160.6 143 54.5
Oeu024660.1 Olea europaea HOM05D004884 ORTHO05D005873 9.5e-35 150.6 82 91.5
Gohir.D13G076450 Gossypium hirsutum HOM05D004884 ORTHO05D005873 1.4e-33 146.7 84 82.1
Gorai.013G087100 Gossypium raimondii HOM05D004884 ORTHO05D005873 1.5e-32 143.3 89 78.7
Haze_21525 Corylus avellana HOM05D004884 ORTHO05D005873 2.7e-29 132.5 152 50.7
Nitab4.5_0001450g0150 Nicotiana tabacum HOM05D004884 ORTHO05D005873 3.6e-26 122.1 86 68.6
Nitab4.5_0000620g0040 Nicotiana tabacum HOM05D004884 ORTHO05D005873 1.1e-22 110.5 65 84.6
DCAR_015322 Daucus carota HOM05D004884 ORTHO05D005873 3.2e-22 109.0 58 89.7
Gohir.A06G098210 Gossypium hirsutum HOM05D004884 ORTHO05D005873 3.0e-20 102.4 63 76.2
Gohir.A13G076901 Gossypium hirsutum HOM05D004884 ORTHO05D005873 3.9e-20 102.1 128 50.8
Nn8g39461 Nelumbo nucifera HOM05D004884 ORTHO05D005873 1.9e-19 99.8 63 74.6
Hund04518 Selenicereus undatus HOM05D004884 ORTHO05D005873 1.9e-19 99.8 60 80.0
Gohir.D01G156500 Gossypium hirsutum HOM05D004884 ORTHO05D005873 5.2e-17 91.7 49 87.8
Cre12.g561200 Chlamydomonas reinhardtii HOM05D004884 ORTHO05D005873 8.9e-17 90.9 140 35.7
MCO11G456 Micromonas commoda HOM05D004884 ORTHO05D005873 8.9e-17 90.9 152 34.9
TPR.G29435 Trifolium pratense HOM05D004884 ORTHO05D005873 3.4e-16 89.0 46 91.3
PRCOL_00001860 Prasinoderma coloniale HOM05D004884 ORTHO05D005873 1.2e-13 80.5 143 32.9
CAN.G185.10 Capsicum annuum HOM05D004884 ORTHO05D005873 1.8e-09 66.6 77 48.1


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