Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 2.0e-256 888.6 456 100.0
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 1.8e-169 599.7 400 78.5
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 5.9e-168 594.7 392 79.6
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 2.9e-167 592.4 396 78.8
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 1.1e-166 590.5 412 76.2
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 6.1e-165 584.7 440 71.1
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.0e-164 583.9 433 71.8
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 4.3e-163 578.6 422 73.5
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 7.4e-163 577.8 472 66.7
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.3e-162 577.0 436 70.6
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.3e-162 577.0 398 76.4
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 3.7e-162 575.5 421 72.0
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 3.1e-161 572.4 470 67.7
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 5.3e-161 571.6 395 76.2
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 9.1e-161 570.9 446 70.6
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 9.1e-161 570.9 393 75.8
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 9.1e-161 570.9 397 75.1
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 1.2e-160 570.5 445 70.1
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 1.5e-160 570.1 421 71.3
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 2.0e-160 569.7 396 76.5
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 2.6e-160 569.3 452 69.9
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 2.2e-159 566.2 452 67.7
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.9e-159 565.8 393 76.3
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 8.5e-159 564.3 421 70.3
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 1.1e-158 563.9 420 70.0
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 3.2e-158 562.4 462 67.7
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 4.2e-158 562.0 417 71.5
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 5.5e-158 561.6 453 68.7
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 5.5e-158 561.6 421 70.3
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 1.2e-157 560.5 389 74.3
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 2.7e-157 559.3 423 72.1
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 7.9e-157 557.8 420 70.0
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 1.0e-156 557.4 422 69.4
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 3.9e-156 555.4 434 68.2
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 8.8e-156 554.3 453 68.0
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 1.1e-155 553.9 357 79.8
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 1.5e-155 553.5 377 75.1
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 1.5e-155 553.5 382 73.8
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 2.0e-155 553.1 389 73.0
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 2.6e-155 552.7 466 63.7
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 3.3e-155 552.4 453 67.5
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 4.4e-155 552.0 390 75.4
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.7e-155 551.6 408 71.6
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 7.4e-155 551.2 421 70.8
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 9.7e-155 550.8 392 74.0
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 1.3e-154 550.4 392 74.2
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.3e-154 550.4 456 67.5
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 1.3e-154 550.4 433 67.7
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 2.2e-154 549.7 392 73.7
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 1.4e-153 547.0 434 67.1
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 2.4e-153 546.2 453 66.2
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 5.3e-153 545.0 432 69.7
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 9.1e-153 544.3 447 67.1
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.5e-152 543.5 396 72.7
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 2.6e-152 542.7 392 73.5
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 3.4e-152 542.3 385 72.5
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 5.9e-152 541.6 491 61.9
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 5.9e-152 541.6 424 67.0
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.0e-151 538.5 434 67.7
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 6.5e-151 538.1 404 70.8
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 6.5e-151 538.1 393 72.8
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 1.1e-150 537.3 373 75.3
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.6e-149 533.5 508 60.0
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 1.0e-148 530.8 369 75.9
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 2.3e-148 529.6 391 70.8
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 3.9e-148 528.9 424 67.7
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 6.7e-148 528.1 406 70.7
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 1.1e-147 527.3 422 66.6
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.7e-146 523.5 333 80.8
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.2e-146 523.1 333 80.5
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 1.8e-145 520.0 482 61.2
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 1.2e-144 517.3 393 71.0
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 2.9e-143 512.7 400 66.8
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 4.2e-142 508.8 396 70.2
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 1.2e-141 507.3 456 61.8
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 6.1e-141 505.0 456 62.5
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 8.0e-141 504.6 443 63.4
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 5.7e-139 498.4 459 60.8
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 1.3e-138 497.3 458 60.9
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 2.8e-138 496.1 431 62.6
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.2e-133 480.7 440 61.4
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 1.3e-130 470.7 412 62.9
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 5.4e-129 465.3 418 61.7
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 1.6e-128 463.8 493 55.4
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 4.5e-128 462.2 475 57.3
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 8.6e-127 458.0 482 56.8
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 9.5e-126 454.5 430 58.4
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 4.0e-124 449.1 378 62.2
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 6.3e-122 441.8 375 64.3
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 1.1e-121 441.0 412 60.9
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 4.1e-121 439.1 405 62.5
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 9.2e-121 438.0 413 60.8
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 9.2e-121 438.0 413 60.8
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 1.2e-120 437.6 374 66.0
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 2.0e-120 436.8 403 62.8
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 1.7e-119 433.7 415 60.5
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 2.3e-116 423.3 343 65.9
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 1.3e-114 417.5 343 65.6
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 1.2e-109 401.0 449 54.8
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 1.2e-109 401.0 449 54.8
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 6.8e-108 395.2 384 59.4
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 3.4e-107 392.9 444 54.7
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 1.7e-106 390.6 379 59.6
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 2.7e-104 383.3 379 57.8
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 2.5e-94 350.1 348 59.2
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.2e-91 341.3 225 79.1
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.7e-88 330.1 278 66.5
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 2.7e-80 303.5 215 70.2
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 4.5e-67 259.6 441 38.1
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 1.8e-60 237.7 157 77.7
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 2.5e-54 217.2 434 35.7
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 5.7e-54 216.1 401 36.2
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 6.3e-53 212.6 139 79.9
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 1.1e-52 211.8 386 40.4
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 3.7e-45 186.8 403 38.0
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 2.9e-42 177.2 152 61.2
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 8.5e-42 175.6 117 77.8
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 8.5e-42 175.6 126 73.0
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 1.8e-39 167.9 125 72.0
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 7.0e-36 156.0 122 69.7
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 8.0e-32 142.5 235 43.0
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 1.7e-26 124.8 192 40.6
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 2.2e-26 124.4 337 31.8
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 2.0e-22 111.3 95 65.3
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 3.7e-21 107.1 79 68.4
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 5.3e-20 103.2 78 69.2
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 5.9e-11 73.2 48 72.9
Pp3c11_910 Physcomitrium patens HOM05D007414 ORTHO05D009482 1.0e-10 72.4 397 24.4
Cre14.g621850 Chlamydomonas reinhardtii HOM05D006098 ORTHO05D007470 5.0e-10 70.1 232 27.2
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 2.1e-08 64.7 381 24.1
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 6.1e-08 63.2 269 28.3
Mapoly0007s0139 Marchantia polymorpha HOM05D007414 ORTHO05D009482 8.0e-08 62.8 416 24.3
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 8.0e-08 62.8 394 25.1
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.4e-07 62.0 312 26.3
Lalb_Chr25g0282101 Lupinus albus HOM05D007414 ORTHO05D009482 3.0e-07 60.8 275 25.8
Nn7g36686 Nelumbo nucifera HOM05D007414 ORTHO05D009482 5.2e-07 60.1 390 23.1
AagrBONN_evm.TU.Sc2ySwM_362.1466 Anthoceros agrestis HOM05D007414 ORTHO05D009482 6.8e-07 59.7 400 25.0
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 8.9e-07 59.3 272 25.7
GSVIVG01013487001 Vitis vinifera HOM05D007414 ORTHO05D009482 8.9e-07 59.3 269 25.7
Aa31LG3G3710 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.2e-06 58.9 61 52.5
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 1.2e-06 58.9 281 24.2
PGSC0003DMG400018334 Solanum tuberosum HOM05D007414 ORTHO05D009482 1.2e-06 58.9 436 23.4
CiPaw.13G013700 Carya illinoinensis HOM05D007414 ORTHO05D009482 1.5e-06 58.5 366 24.0
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.5e-06 58.5 272 25.4
Nitab4.5_0000307g0260 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.5e-06 58.5 312 25.3
Solyc01g096400.4 Solanum lycopersicum HOM05D007414 ORTHO05D009482 1.5e-06 58.5 380 23.9
Sopen01g040130 Solanum pennellii HOM05D007414 ORTHO05D009482 1.5e-06 58.5 357 23.8
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 2.6e-06 57.8 285 24.9
EL10Ac2g02800 Beta vulgaris HOM05D007414 ORTHO05D009482 4.4e-06 57.0 374 24.1
PSO339G0457 Papaver somniferum HOM05D007414 ORTHO05D009482 4.4e-06 57.0 351 23.9
TAR623G0974 Trochodendron aralioides HOM05D007414 ORTHO05D009482 4.4e-06 57.0 230 26.1
RcHm_v2.0_Chr1g0324301 Rosa chinensis HOM05D007414 ORTHO05D009482 7.5e-06 56.2 278 24.8
TWI15G0498 Tripterygium wilfordii HOM05D007414 ORTHO05D009482 7.5e-06 56.2 363 23.4
PSO384G0147 Papaver somniferum HOM05D007414 ORTHO05D009482 9.8e-06 55.8 351 23.6


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