Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 5.8e-153 544.3 290 100.0
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 1.0e-96 357.5 233 75.1
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 1.0e-96 357.5 233 75.1
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 1.0e-96 357.5 227 77.5
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 6.5e-96 354.8 237 74.7
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 4.2e-95 352.1 230 73.9
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 1.2e-94 350.5 226 77.0
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 1.2e-94 350.5 263 68.8
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 2.7e-94 349.4 260 70.8
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 6.1e-94 348.2 238 76.1
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 3.0e-93 345.9 230 74.3
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 5.1e-93 345.1 242 72.7
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 8.8e-93 344.4 243 73.3
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 4.4e-92 342.0 227 76.7
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 7.4e-92 341.3 238 73.1
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 9.7e-92 340.9 258 70.9
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 1.3e-91 340.5 238 70.6
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 2.2e-91 339.7 226 73.9
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 2.8e-91 339.3 243 73.3
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 3.7e-91 339.0 290 64.8
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 3.7e-91 339.0 242 71.1
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 4.8e-91 338.6 287 63.8
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 6.3e-91 338.2 252 69.4
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 8.2e-91 337.8 260 68.8
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 1.1e-90 337.4 241 72.2
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 1.8e-90 336.7 282 66.0
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 2.4e-90 336.3 244 72.1
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 2.4e-90 336.3 226 73.0
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 4.1e-90 335.5 237 71.3
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 4.1e-90 335.5 262 67.6
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 5.3e-90 335.1 257 69.3
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 9.1e-90 334.3 230 72.6
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 4.5e-89 332.0 228 72.8
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 4.5e-89 332.0 238 69.7
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 5.9e-89 331.6 239 72.4
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 1.3e-88 330.5 241 70.1
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 2.2e-88 329.7 237 70.9
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 2.9e-88 329.3 248 69.4
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 2.9e-88 329.3 261 66.7
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 6.5e-88 328.2 229 69.9
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 8.5e-88 327.8 229 71.2
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 1.1e-87 327.4 226 71.2
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 2.5e-87 326.2 231 71.0
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 3.2e-87 325.9 236 69.9
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 2.7e-86 322.8 266 63.5
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 2.7e-86 322.8 226 68.1
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 4.7e-86 322.0 226 67.7
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 6.1e-86 321.6 206 76.2
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 1.4e-85 320.5 283 61.5
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 3.9e-85 318.9 271 64.2
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 3.9e-85 318.9 230 70.9
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 5.2e-85 318.5 247 66.0
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 6.7e-85 318.2 233 70.4
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 6.7e-85 318.2 227 71.4
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 1.1e-84 317.4 243 66.7
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 2.0e-84 316.6 264 64.8
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 2.6e-84 316.2 292 58.6
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 3.3e-84 315.8 252 66.7
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 7.4e-84 314.7 266 65.0
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 1.3e-83 313.9 224 69.6
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 1.3e-83 313.9 237 66.7
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 2.8e-83 312.8 237 66.2
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 3.7e-83 312.4 206 76.2
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 4.8e-83 312.0 279 61.6
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 6.3e-83 311.6 264 61.4
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 1.4e-82 310.5 237 65.8
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 1.4e-82 310.5 267 63.7
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 2.4e-82 309.7 227 67.4
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 2.4e-82 309.7 241 66.0
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 7.0e-82 308.1 230 66.5
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 9.1e-82 307.8 236 65.7
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 1.2e-81 307.4 230 67.0
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 5.9e-81 305.1 227 67.0
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 7.7e-81 304.7 260 62.3
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 1.0e-80 304.3 230 66.1
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 1.0e-80 304.3 293 58.0
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 1.7e-80 303.5 260 61.5
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 2.2e-80 303.1 267 61.0
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 8.5e-80 301.2 258 63.2
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 1.1e-79 300.8 237 65.0
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 1.1e-79 300.8 252 62.3
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 7.2e-79 298.1 238 65.5
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 1.4e-77 293.9 263 62.4
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 1.8e-77 293.5 266 59.0
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 5.2e-77 292.0 218 66.1
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 5.2e-77 292.0 272 57.0
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 6.7e-77 291.6 236 61.4
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 8.8e-77 291.2 343 51.0
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 9.7e-76 287.7 212 68.4
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 9.7e-76 287.7 234 63.7
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 1.8e-74 283.5 289 57.4
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 2.7e-73 279.6 263 55.5
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 7.7e-73 278.1 222 64.9
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 1.0e-72 277.7 258 57.4
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 1.9e-71 273.5 358 45.0
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 6.1e-70 268.5 205 62.9
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 1.0e-69 267.7 223 64.1
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 5.2e-69 265.4 177 75.7
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 6.8e-69 265.0 276 54.3
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 8.3e-67 258.1 209 63.2
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 1.8e-66 256.9 180 71.1
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 2.2e-64 250.0 229 54.1
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 7.2e-63 245.0 224 54.9
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 3.0e-61 239.6 223 54.7
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 4.9e-59 232.3 167 70.7
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 1.0e-56 224.6 232 52.2
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 1.3e-56 224.2 261 51.3
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 5.0e-56 222.2 242 50.4
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 2.1e-54 216.9 171 64.9
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 8.9e-53 211.5 171 62.6
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 8.3e-51 204.9 184 60.3
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 7.0e-50 201.8 250 45.2
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 2.0e-49 200.3 142 73.2
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 5.9e-49 198.7 252 49.6
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 6.6e-48 195.3 228 46.1
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 1.7e-43 180.6 253 45.1
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 2.3e-40 170.2 225 43.6
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 1.2e-36 157.9 119 65.5
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 1.6e-33 147.5 119 60.5
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 1.1e-29 134.8 178 43.8
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 2.9e-27 126.7 155 46.5
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 1.3e-16 91.3 62 67.7
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 1.9e-07 60.8 54 51.9
PGSC0003DMG400030254 Solanum tuberosum HOM05D000561 ORTHO05D008162 8.1e-06 55.5 36 77.8


User provided reference genes

Program Settings