Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G3289 Punica granatum HOM05D009419 ORTHO05D011473 2.8e-149 531.9 277 100.0
PGR102G2577 Punica granatum HOM05D009419 ORTHO05D011473 9.2e-100 367.5 279 72.0
Eucgr.B03921 Eucalyptus grandis HOM05D009419 ORTHO05D011473 1.4e-34 151.0 275 36.7
Gohir.D07G109200 Gossypium hirsutum HOM05D009419 ORTHO05D011473 2.6e-25 120.2 224 35.7
Gorai.001G117300 Gossypium raimondii HOM05D009419 ORTHO05D011473 2.6e-25 120.2 224 35.7
COL.COLO4_19208 Corchorus olitorius HOM05D009419 ORTHO05D011473 4.4e-25 119.4 214 35.5
Ciclev10029167m.g Citrus clementina HOM05D009419 ORTHO05D011473 2.2e-24 117.1 262 31.7
Duzib168G0860 Durio zibethinus HOM05D009419 ORTHO05D011473 1.1e-23 114.8 234 34.2
Gohir.A07G105100 Gossypium hirsutum HOM05D009419 ORTHO05D011473 1.4e-23 114.4 224 34.8
Duzib150G0155 Durio zibethinus HOM05D009419 ORTHO05D011473 2.4e-23 113.6 214 35.0
Thecc.09G297700 Theobroma cacao HOM05D009419 ORTHO05D011473 4.1e-23 112.8 236 34.3
Dinv16239 Davidia involucrata HOM05D009419 ORTHO05D011473 2.0e-22 110.5 219 37.0
TAR633G1436 Trochodendron aralioides HOM05D009419 ORTHO05D011473 2.8e-19 100.1 277 31.4
ClCG02G021680 Citrullus lanatus HOM05D009419 ORTHO05D011473 3.6e-19 99.8 217 31.8
MELO3C026957.2 Cucumis melo HOM05D009419 ORTHO05D011473 3.0e-18 96.7 204 33.3
CANSAT64G0909 Cannabis sativa HOM05D009419 ORTHO05D011473 6.8e-18 95.5 232 32.8
CsaV3_6G014420 Cucumis sativus L. HOM05D009419 ORTHO05D011473 2.6e-17 93.6 207 32.4
Nitab4.5_0000173g0200 Nicotiana tabacum HOM05D009419 ORTHO05D011473 1.4e-15 87.8 248 29.4
PSO339G4034 Papaver somniferum HOM05D009419 ORTHO05D011473 1.8e-15 87.4 294 27.9
Sed0027206 Sechium edule HOM05D009419 ORTHO05D011473 7.0e-15 85.5 216 28.2
PSO801G0785 Papaver somniferum HOM05D009419 ORTHO05D011473 1.2e-14 84.7 292 27.7
Nitab4.5_0003880g0030 Nicotiana tabacum HOM05D009419 ORTHO05D011473 2.7e-14 83.6 244 28.7
Solyc11g066460.1 Solanum lycopersicum HOM05D009419 ORTHO05D011473 7.7e-14 82.0 238 27.7
Sopen11g026210 Solanum pennellii HOM05D009419 ORTHO05D011473 2.9e-13 80.1 238 28.6
Peaxi162Scf00983g00005 Petunia axillaris HOM05D009419 ORTHO05D011473 2.5e-12 77.0 255 25.9
Nn2g13875 Nelumbo nucifera HOM05D009419 ORTHO05D011473 6.1e-11 72.4 104 41.3
Ca_05065_v3 Cicer arietinum L. HOM05D000538 ORTHO05D000614 2.9e-08 63.5 230 27.0
TWI38G1831 Tripterygium wilfordii HOM05D000538 ORTHO05D000614 8.3e-08 62.0 247 25.5
Nitab4.5_0008264g0010 Nicotiana tabacum HOM05D000538 ORTHO05D000614 3.2e-07 60.1 247 27.5
MD05G1335900 Malus domestica HOM05D000538 ORTHO05D000614 4.1e-07 59.7 282 24.1
Migut.H01546 Erythranthe guttata HOM05D000538 ORTHO05D000614 3.5e-06 56.6 147 29.3
TAR627G0243 Trochodendron aralioides HOM05D000538 ORTHO05D000614 3.5e-06 56.6 239 23.8
Duzib213G0460 Durio zibethinus HOM05D000538 ORTHO05D000614 4.6e-06 56.2 101 28.7
CsaV3_UNG143080 Cucumis sativus L. HOM05D009419 ORTHO05D011473 5.9e-06 55.8 64 43.8
CDE05G1513 Ceratophyllum demersum HOM05D000538 ORTHO05D000614 7.8e-06 55.5 265 25.7


User provided reference genes

Program Settings