Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G3128 Punica granatum HOM05D007830 ORTHO05D009947 4.9e-80 302.0 150 100.0
PGR031G1570 Punica granatum HOM05D007830 ORTHO05D009947 5.6e-60 235.3 219 60.7
QL03p010264 Quercus lobata HOM05D007830 ORTHO05D009947 1.2e-33 147.9 219 41.1
Eucgr.H01319 Eucalyptus grandis HOM05D007830 ORTHO05D009947 5.9e-33 145.6 225 39.1
QL03p010498 Quercus lobata HOM05D007830 ORTHO05D009947 8.5e-32 141.7 219 39.7
MSTRG.16426 Avicennia marina HOM05D007830 ORTHO05D009947 2.1e-30 137.1 219 37.9
TWI56G0273 Tripterygium wilfordii HOM05D007830 ORTHO05D009947 7.9e-30 135.2 218 37.2
RcHm_v2.0_Chr3g0458391 Rosa chinensis HOM05D007830 ORTHO05D009947 1.5e-28 131.0 219 37.9
CiPaw.07G037200 Carya illinoinensis HOM05D007830 ORTHO05D009947 9.7e-28 128.3 219 37.9
Cc02_g35800 Coffea canephora HOM05D007830 ORTHO05D009947 3.7e-27 126.3 213 37.6
Dinv24509 Davidia involucrata HOM05D007830 ORTHO05D009947 3.7e-27 126.3 219 35.2
Cfa006760 Carpinus fangiana HOM05D007830 ORTHO05D009947 4.1e-26 122.9 133 51.1
MD04G1187000 Malus domestica HOM05D007830 ORTHO05D009947 4.1e-26 122.9 219 37.0
Haze_03995 Corylus avellana HOM05D007830 ORTHO05D009947 5.3e-26 122.5 219 37.0
Sopen01g044630 Solanum pennellii HOM05D007830 ORTHO05D009947 5.3e-26 122.5 219 34.7
Manes.09G180800 Manihot esculenta HOM05D007830 ORTHO05D009947 9.0e-26 121.7 215 36.3
FAN14G2917 Fragaria x ananassa HOM05D007830 ORTHO05D009947 1.5e-25 120.9 219 35.2
FvH4_6g08430 Fragaria vesca HOM05D007830 ORTHO05D009947 2.0e-25 120.6 219 34.7
FAN05G5807 Fragaria x ananassa HOM05D007830 ORTHO05D009947 2.6e-25 120.2 219 35.6
Ciclev10011168m.g Citrus clementina HOM05D007830 ORTHO05D009947 3.4e-25 119.8 220 35.5
Atru.chr12.1550 Acer truncatum HOM05D007830 ORTHO05D009947 5.9e-25 119.0 219 34.2
Nitab4.5_0005904g0050 Nicotiana tabacum HOM05D007830 ORTHO05D009947 1.3e-24 117.9 219 34.7
FAN09G0226 Fragaria x ananassa HOM05D007830 ORTHO05D009947 1.7e-24 117.5 219 35.2
Hma1.2p1_0052F.1_g030410 Hydrangea macrophylla HOM05D007830 ORTHO05D009947 2.9e-24 116.7 219 33.3
Oeu029182.1 Olea europaea HOM05D007830 ORTHO05D009947 2.9e-24 116.7 219 33.8
FAN02G3946 Fragaria x ananassa HOM05D007830 ORTHO05D009947 8.5e-24 115.2 220 35.5
Rhsim11G0102200 Rhododendron simsii HOM05D007830 ORTHO05D009947 8.5e-24 115.2 213 35.2
Migut.B00878 Erythranthe guttata HOM05D007830 ORTHO05D009947 1.1e-23 114.8 223 34.5
SGA_v2.0_scaffold117G32413 Striga asiatica HOM05D007830 ORTHO05D009947 7.2e-23 112.1 220 33.6
arahy.Tifrunner.gnm1.ann1.B5RE77 Arachis hypogaea HOM05D007830 ORTHO05D009947 9.4e-23 111.7 212 34.0
CANSAT54G0214 Cannabis sativa HOM05D007830 ORTHO05D009947 9.4e-23 111.7 213 36.2
Nitab4.5_0002485g0040 Nicotiana tabacum HOM05D007830 ORTHO05D009947 1.6e-22 110.9 219 33.3
Nn3g21915 Nelumbo nucifera HOM05D007830 ORTHO05D009947 2.1e-22 110.5 219 32.0
Thecc.05G329100 Theobroma cacao HOM05D007830 ORTHO05D009947 2.7e-22 110.2 219 34.2
Prupe.6G305500 Prunus persica HOM05D007830 ORTHO05D009947 7.9e-22 108.6 177 41.2
MBI06_g27503_MAGBIO Magnolia biondii HOM05D007830 ORTHO05D009947 1.0e-21 108.2 219 31.5
PGSC0003DMG400018287 Solanum tuberosum HOM05D007830 ORTHO05D009947 1.4e-21 107.8 219 32.9
Sabra05G0000600 Salix brachista HOM05D007830 ORTHO05D009947 6.7e-21 105.5 173 37.6
Sabra05G0014700 Salix brachista HOM05D007830 ORTHO05D009947 8.8e-21 105.1 173 37.0
Ah.10g026910 Amaranthus hybridus HOM05D007830 ORTHO05D009947 1.1e-20 104.8 219 29.2
Potri.005G003200 Populus trichocarpa HOM05D007830 ORTHO05D009947 1.1e-20 104.8 173 37.0
CAN.G1248.21 Capsicum annuum HOM05D007830 ORTHO05D009947 2.0e-20 104.0 220 30.9
Actinidia11685 Actinidia chinensis HOM05D007830 ORTHO05D009947 3.3e-20 103.2 214 30.8
GSVIVG01031321001 Vitis vinifera HOM05D007830 ORTHO05D009947 3.3e-20 103.2 197 30.5
Duzib128G1385 Durio zibethinus HOM05D007830 ORTHO05D009947 9.7e-20 101.7 219 32.0
PSO761G0258 Papaver somniferum HOM05D007830 ORTHO05D009947 9.7e-20 101.7 218 32.1
Potri.013G002800 Populus trichocarpa HOM05D007830 ORTHO05D009947 1.3e-19 101.3 173 35.3
COL.COLO4_05513 Corchorus olitorius HOM05D007830 ORTHO05D009947 1.7e-19 100.9 218 32.1
Lsat_1_v5_gn_7_63920 Lactuca sativa HOM05D007830 ORTHO05D009947 3.7e-19 99.8 219 30.6
Lj5g0007590 Lotus japonicus HOM05D007830 ORTHO05D009947 3.7e-19 99.8 219 32.0
HanXRQChr03g0088351 Helianthus annuus HOM05D007830 ORTHO05D009947 4.8e-19 99.4 213 29.6
DCAR_029288 Daucus carota HOM05D007830 ORTHO05D009947 3.1e-18 96.7 194 31.4
MD12G1200400 Malus domestica HOM05D007830 ORTHO05D009947 3.1e-18 96.7 127 43.3
Ca_10196_v3 Cicer arietinum L. HOM05D007830 ORTHO05D009947 4.1e-18 96.3 174 32.8
Psat6g155440 Pisum sativum HOM05D007830 ORTHO05D009947 2.0e-17 94.0 219 30.6
Hund21836 Selenicereus undatus HOM05D007830 ORTHO05D009947 5.9e-17 92.4 218 28.4
Glyma.20G092100 Glycine max HOM05D007830 ORTHO05D009947 1.0e-16 91.7 213 31.9
Phvul.007G204600 Phaseolus vulgaris HOM05D007830 ORTHO05D009947 1.0e-16 91.7 220 32.3
Medtr1g484840 Medicago truncatula HOM05D007830 ORTHO05D009947 1.1e-15 88.2 188 31.4
Glyma.20G092800 Glycine max HOM05D007830 ORTHO05D009947 1.4e-15 87.8 168 33.9
TPR.G2587 Trifolium pratense HOM05D007830 ORTHO05D009947 1.4e-15 87.8 220 29.5
VMungo0720G1493 Vigna mungo HOM05D007830 ORTHO05D009947 2.5e-15 87.0 111 45.0
ATR0796G327 Amborella trichopoda HOM05D007830 ORTHO05D009947 3.2e-15 86.7 95 44.2
AUR62000469 Chenopodium quinoa HOM05D007830 ORTHO05D009947 2.1e-14 84.0 222 27.5
AUR62006810 Chenopodium quinoa HOM05D007830 ORTHO05D009947 2.7e-14 83.6 221 28.5
Gohir.A11G275500 Gossypium hirsutum HOM05D007830 ORTHO05D009947 5.2e-13 79.3 179 33.0
Gorai.007G309100 Gossypium raimondii HOM05D007830 ORTHO05D009947 8.8e-13 78.6 179 33.0
unitig_578.g15943 Utricularia gibba HOM05D007830 ORTHO05D009947 2.0e-12 77.4 198 26.8
Gohir.D11G285900 Gossypium hirsutum HOM05D007830 ORTHO05D009947 5.7e-12 75.9 179 32.4
Zm00001eb060630 Zea mays HOM05D007830 ORTHO05D009947 1.5e-07 61.2 124 33.1
Peaxi162Scf00357g00014 Petunia axillaris HOM05D007830 ORTHO05D009947 2.5e-07 60.5 49 59.2
Lj5P319T39 Lonicera japonica HOM05D007830 ORTHO05D009947 9.4e-07 58.5 60 46.7
PSO210G0421 Papaver somniferum HOM05D007830 ORTHO05D009947 2.1e-06 57.4 144 25.7


User provided reference genes

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