Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G3105 Punica granatum HOM05D007769 ORTHO05D009588 3.6e-33 144.4 78 100.0
Potri.014G015866 Populus trichocarpa HOM05D007769 ORTHO05D009588 2.6e-23 111.7 79 79.7
Manes.05G182100 Manihot esculenta HOM05D007769 ORTHO05D009588 3.4e-23 111.3 79 79.7
Eucgr.F02251 Eucalyptus grandis HOM05D007769 ORTHO05D009588 7.5e-23 110.2 78 76.9
Potri.002G118366 Populus trichocarpa HOM05D007769 ORTHO05D009588 7.5e-23 110.2 79 79.7
Gohir.D05G213500 Gossypium hirsutum HOM05D007769 ORTHO05D009588 2.8e-22 108.2 78 74.4
Gorai.009G220200 Gossypium raimondii HOM05D007769 ORTHO05D009588 2.8e-22 108.2 78 74.4
Gohir.D01G110800 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.1e-21 106.3 73 76.7
unitig_8.g5043 Utricularia gibba HOM05D007769 ORTHO05D009588 1.4e-21 105.9 73 78.1
COL.COLO4_28504 Corchorus olitorius HOM05D007769 ORTHO05D009588 1.8e-21 105.5 73 79.5
Sabra02G0093000 Salix brachista HOM05D007769 ORTHO05D009588 2.4e-21 105.1 74 81.1
Sabra14G0009800 Salix brachista HOM05D007769 ORTHO05D009588 2.4e-21 105.1 74 81.1
Duzib093G1544 Durio zibethinus HOM05D007769 ORTHO05D009588 1.2e-20 102.8 73 76.7
TWI12G0690 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 1.2e-20 102.8 71 78.9
Lsat_1_v5_gn_4_131941 Lactuca sativa HOM05D007769 ORTHO05D009588 5.9e-20 100.5 73 79.5
CiPaw.07G174700 Carya illinoinensis HOM05D007769 ORTHO05D009588 7.7e-20 100.1 73 74.0
Actinidia08247 Actinidia chinensis HOM05D007769 ORTHO05D009588 2.3e-19 98.6 73 75.3
CSS0007942 Camellia sinensis var. sinensis HOM05D007769 ORTHO05D009588 2.3e-19 98.6 73 75.3
Lj5g0000132 Lotus japonicus HOM05D007769 ORTHO05D009588 2.3e-19 98.6 78 71.8
TWI56G0221 Tripterygium wilfordii HOM05D007769 ORTHO05D009588 2.3e-19 98.6 71 77.5
PSO017G3300 Papaver somniferum HOM05D007769 ORTHO05D009588 3.8e-19 97.8 78 69.2
PSO170G4501 Papaver somniferum HOM05D007769 ORTHO05D009588 3.8e-19 97.8 78 69.2
THA.LOC104825778 Tarenaya hassleriana HOM05D007769 ORTHO05D009588 3.8e-19 97.8 73 74.0
HanXRQChr02g0039171 Helianthus annuus HOM05D007769 ORTHO05D009588 5.0e-19 97.4 73 76.7
Actinidia38106 Actinidia chinensis HOM05D007769 ORTHO05D009588 8.6e-19 96.7 73 74.0
Ciclev10003023m.g Citrus clementina HOM05D007769 ORTHO05D009588 8.6e-19 96.7 67 77.6
Atru.chr13.834 Acer truncatum HOM05D007769 ORTHO05D009588 1.1e-18 96.3 72 72.2
MELO3C010803.2 Cucumis melo HOM05D007769 ORTHO05D009588 1.1e-18 96.3 78 69.2
Gohir.A05G210200 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.9e-18 95.5 81 69.1
Sed0024574 Sechium edule HOM05D007769 ORTHO05D009588 1.9e-18 95.5 78 69.2
CARHR277820 Cardamine hirsuta HOM05D007769 ORTHO05D009588 3.3e-18 94.7 73 71.2
TPR.G37744 Trifolium pratense HOM05D007769 ORTHO05D009588 3.3e-18 94.7 78 70.5
Aa31LG2G19320 Aethionema arabicum HOM05D007769 ORTHO05D009588 4.2e-18 94.4 73 72.6
EL10Ac1g02381 Beta vulgaris HOM05D007769 ORTHO05D009588 1.2e-17 92.8 78 65.4
Aqoxy5G00863 Aquilegia oxysepala HOM05D007769 ORTHO05D009588 2.8e-17 91.7 79 68.4
Carub.0008s2472 Capsella rubella HOM05D007769 ORTHO05D009588 2.8e-17 91.7 73 68.5
ECA232G2369 Erigeron canadensis HOM05D007769 ORTHO05D009588 2.8e-17 91.7 79 72.2
SalBow7G0030 Salvia bowleyana HOM05D007769 ORTHO05D009588 2.8e-17 91.7 73 71.2
Ca_13216_v3 Cicer arietinum L. HOM05D007769 ORTHO05D009588 3.6e-17 91.3 78 66.7
Medtr1g018020 Medicago truncatula HOM05D007769 ORTHO05D009588 8.0e-17 90.1 78 65.4
Psat6g018200 Pisum sativum HOM05D007769 ORTHO05D009588 1.0e-16 89.7 78 65.4
arahy.Tifrunner.gnm1.ann1.3X0B87 Arachis hypogaea HOM05D007769 ORTHO05D009588 1.4e-16 89.4 74 70.3
Gohir.A01G123201 Gossypium hirsutum HOM05D007769 ORTHO05D009588 1.4e-16 89.4 87 60.9
CsaV3_2G026100 Cucumis sativus L. HOM05D007769 ORTHO05D009588 1.8e-16 89.0 73 69.9
Glyma.14G089015 Glycine max HOM05D007769 ORTHO05D009588 4.0e-16 87.8 78 69.2
arahy.Tifrunner.gnm1.ann1.5K9QCS Arachis hypogaea HOM05D007769 ORTHO05D009588 5.2e-16 87.4 74 68.9
BcaNung04624 Brassica carinata HOM05D007769 ORTHO05D009588 8.9e-16 86.7 73 65.8
Sed0002164 Sechium edule HOM05D007769 ORTHO05D009588 8.9e-16 86.7 73 65.8
Glyma.17G234900 Glycine max HOM05D007769 ORTHO05D009588 1.2e-15 86.3 78 67.9
BcaC04g23346 Brassica carinata HOM05D007769 ORTHO05D009588 2.0e-15 85.5 73 67.1
ClCG08G016510 Citrullus lanatus HOM05D007769 ORTHO05D009588 5.7e-15 84.0 73 67.1
AT5G63905 Arabidopsis thaliana HOM05D007769 ORTHO05D009588 9.8e-15 83.2 73 64.4
CDE04G0481 Ceratophyllum demersum HOM05D007769 ORTHO05D009588 9.8e-15 83.2 72 69.4
AL8G41140 Arabidopsis lyrata HOM05D007769 ORTHO05D009588 2.2e-14 82.0 73 64.4
SGA_v2.0_scaffold238G43959 Striga asiatica HOM05D007769 ORTHO05D009588 2.9e-14 81.6 68 70.6
Lalb_Chr14g0368191 Lupinus albus HOM05D007769 ORTHO05D009588 4.9e-14 80.9 78 60.3
HPP92_006078 Vanilla planifolia HOM05D007769 ORTHO05D009588 4.9e-14 80.9 75 66.7
AagrBONN_evm.TU.Sc2ySwM_344.2823 Anthoceros agrestis HOM05D007769 ORTHO05D009588 2.4e-13 78.6 78 56.4
Migut.C00485 Erythranthe guttata HOM05D007769 ORTHO05D009588 2.4e-13 78.6 73 64.4
Gorai.002G135600 Gossypium raimondii HOM05D007769 ORTHO05D009588 3.2e-13 78.2 86 57.0
A09p08470 Brassica napus HOM05D007769 ORTHO05D009588 4.1e-13 77.8 68 66.2
BraA09t36497Z Brassica rapa HOM05D007769 ORTHO05D009588 4.1e-13 77.8 68 66.2
C09p09600 Brassica napus HOM05D007769 ORTHO05D009588 9.2e-13 76.6 68 66.2
BolC9t53870H Brassica oleracea HOM05D007769 ORTHO05D009588 9.2e-13 76.6 68 66.2
Rhsim07G0219800 Rhododendron simsii HOM05D007769 ORTHO05D009588 9.2e-13 76.6 88 58.0
Thhalv10005134m.g Eutrema salsugineum HOM05D007769 ORTHO05D009588 3.5e-12 74.7 73 58.9
Nn1g04547 Nelumbo nucifera HOM05D007769 ORTHO05D009588 3.5e-12 74.7 77 63.6
CANSAT78G2421 Cannabis sativa HOM05D007769 ORTHO05D009588 4.6e-12 74.3 76 57.9
Haze_22434 Corylus avellana HOM05D007769 ORTHO05D009588 4.6e-12 74.3 86 53.5
FAN27G1659 Fragaria x ananassa HOM05D007769 ORTHO05D009588 4.6e-12 74.3 78 57.7
Sp2g26970 Schrenkiella parvula HOM05D007769 ORTHO05D009588 4.6e-12 74.3 73 58.9
Nn5g30603 Nelumbo nucifera HOM05D007769 ORTHO05D009588 1.3e-11 72.8 83 59.0
FAN20G1609 Fragaria x ananassa HOM05D007769 ORTHO05D009588 5.0e-11 70.9 92 52.2
FAN15G2183 Fragaria x ananassa HOM05D007769 ORTHO05D009588 1.1e-10 69.7 73 58.9
Dinv39221 Davidia involucrata HOM05D007769 ORTHO05D009588 1.5e-10 69.3 73 61.6
QL12p038109 Quercus lobata HOM05D007769 ORTHO05D009588 2.5e-10 68.6 98 50.0
CANSAT25G3084 Cannabis sativa HOM05D007769 ORTHO05D009588 7.3e-10 67.0 76 53.9
Phvul.001G027800 Phaseolus vulgaris HOM05D007769 ORTHO05D009588 7.3e-10 67.0 77 54.5
Hma1.2p1_0819F.1_g223670 Hydrangea macrophylla HOM05D007769 ORTHO05D009588 3.4e-07 58.2 68 57.4
Mapoly0040s0100 Marchantia polymorpha HOM05D007769 ORTHO05D009588 1.7e-06 55.8 78 47.4
Peaxi162Scf00003g01523 Petunia axillaris HOM05D007769 ORTHO05D009588 8.3e-06 53.5 39 74.4


User provided reference genes

Program Settings