Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 0.0e+00 1077.0 546 100.0
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 2.3e-158 563.1 551 56.1
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 7.5e-154 548.1 549 53.6
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 1.0e-150 537.7 544 54.6
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 1.9e-149 533.5 543 54.9
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 1.4e-147 527.3 559 53.8
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 4.0e-147 525.8 574 52.6
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 5.2e-147 525.4 542 53.5
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 7.5e-146 521.5 559 51.5
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 1.3e-145 520.8 544 52.0
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 2.2e-145 520.0 552 51.8
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 1.9e-144 516.9 541 52.7
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 8.6e-142 508.1 564 51.8
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 3.6e-140 502.7 533 51.6
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 6.2e-140 501.9 552 51.3
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 8.1e-140 501.5 518 53.3
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 8.1e-140 501.5 549 52.8
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 1.4e-139 500.7 536 50.6
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 3.1e-139 499.6 552 50.7
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 5.2e-139 498.8 552 49.8
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 8.9e-139 498.0 519 52.8
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 2.6e-138 496.5 557 51.2
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 2.2e-137 493.4 541 50.6
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 2.2e-137 493.4 541 50.8
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 3.8e-137 492.7 569 49.2
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 3.8e-137 492.7 557 50.4
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 4.9e-137 492.3 546 50.9
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 2.7e-135 486.5 545 50.8
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 4.6e-135 485.7 541 49.7
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 9.6e-133 478.0 524 51.7
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 2.1e-132 476.9 557 49.7
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 8.1e-132 474.9 550 50.0
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 1.4e-131 474.2 554 50.4
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 1.8e-131 473.8 553 48.3
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 1.2e-130 471.1 541 51.6
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 1.5e-130 470.7 551 48.6
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 1.5e-130 470.7 541 51.2
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 2.0e-130 470.3 507 53.5
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 5.8e-130 468.8 584 48.3
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 1.7e-129 467.2 490 53.7
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 2.9e-129 466.5 559 48.5
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 4.9e-129 465.7 547 50.1
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 6.4e-129 465.3 544 49.6
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 8.4e-129 464.9 581 47.5
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 2.4e-128 463.4 518 51.7
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 3.2e-128 463.0 551 49.2
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 5.4e-128 462.2 557 48.5
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 7.1e-128 461.8 538 50.4
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 2.7e-127 459.9 555 48.5
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 4.6e-127 459.1 546 48.4
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 6.0e-127 458.8 533 48.4
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 1.3e-126 457.6 556 46.9
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 1.7e-126 457.2 549 48.1
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 3.0e-126 456.4 557 49.4
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 1.9e-125 453.8 551 46.8
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 7.3e-125 451.8 551 48.3
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 9.6e-125 451.4 582 46.6
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 2.8e-124 449.9 526 50.0
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 3.6e-124 449.5 551 47.9
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 6.9e-123 445.3 542 47.2
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 6.9e-123 445.3 542 47.2
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 2.0e-122 443.7 561 48.1
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 7.6e-122 441.8 513 50.1
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 1.9e-120 437.2 492 49.2
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 4.2e-120 436.0 560 47.0
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 6.0e-111 405.6 546 47.6
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 7.4e-109 398.7 504 46.2
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 1.4e-107 394.4 379 55.4
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 8.4e-105 385.2 455 46.8
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 8.7e-102 375.2 549 41.3
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 7.4e-101 372.1 464 46.1
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 1.6e-95 354.4 504 41.5
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 3.6e-95 353.2 368 51.9
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 3.3e-93 346.7 374 54.8
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 2.5e-88 330.5 564 38.1
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 9.4e-88 328.6 564 37.4
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 1.7e-84 317.8 297 58.2
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 4.8e-84 316.2 364 49.2
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 8.2e-84 315.5 480 42.9
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 1.4e-83 314.7 349 51.6
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 3.6e-79 300.1 349 46.1
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 9.7e-77 292.0 554 35.7
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 5.2e-70 269.6 348 46.8
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 1.6e-66 258.1 627 32.2
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 1.3e-41 175.3 188 51.6
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 3.4e-37 160.6 168 51.2
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 1.5e-29 135.2 123 56.1
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 7.5e-29 132.9 136 48.5
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 1.4e-22 112.1 158 42.4
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 1.1e-19 102.4 125 50.4
PGSC0003DMG400033855 Solanum tuberosum HOM05D007729 ORTHO05D009724 1.9e-08 65.1 73 43.8
CBR_g1071 Chara braunii HOM05D036030 ORTHO05D009724 1.4e-06 58.9 170 29.4


User provided reference genes

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