Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G2709 Punica granatum HOM05D006416 ORTHO05D008054 1.2e-155 553.1 286 100.0
Eucgr.H04456 Eucalyptus grandis HOM05D006416 ORTHO05D008054 3.8e-125 451.8 292 81.5
QL03p004338 Quercus lobata HOM05D006416 ORTHO05D008054 3.3e-124 448.7 294 79.9
Duzib128G1696 Durio zibethinus HOM05D006416 ORTHO05D008054 3.0e-122 442.2 296 79.1
Prupe.6G330400 Prunus persica HOM05D006416 ORTHO05D008054 5.2e-122 441.4 296 78.0
Gohir.A11G262900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 6.8e-122 441.0 296 79.1
Ah.06g190130 Amaranthus hybridus HOM05D006416 ORTHO05D008054 3.4e-121 438.7 297 79.1
CiPaw.08G166800 Carya illinoinensis HOM05D006416 ORTHO05D008054 3.4e-121 438.7 296 78.7
Gohir.D11G272900 Gossypium hirsutum HOM05D006416 ORTHO05D008054 4.4e-121 438.3 296 78.7
Oeu043843.1 Olea europaea HOM05D006416 ORTHO05D008054 4.4e-121 438.3 289 79.6
Duzib177G0710 Durio zibethinus HOM05D006416 ORTHO05D008054 1.7e-120 436.4 296 78.7
Gorai.007G294200 Gossypium raimondii HOM05D006416 ORTHO05D008054 2.9e-120 435.6 296 78.4
Actinidia23608 Actinidia chinensis HOM05D006416 ORTHO05D008054 1.1e-119 433.7 296 77.7
Thecc.05G308500 Theobroma cacao HOM05D006416 ORTHO05D008054 1.4e-119 433.3 296 77.0
Oeu032896.2 Olea europaea HOM05D006416 ORTHO05D008054 4.1e-119 431.8 289 79.2
GSVIVG01000004001 Vitis vinifera HOM05D006416 ORTHO05D008054 5.4e-119 431.4 297 78.5
Rhsim07G0179600 Rhododendron simsii HOM05D006416 ORTHO05D008054 9.2e-119 430.6 296 76.7
COL.COLO4_13518 Corchorus olitorius HOM05D006416 ORTHO05D008054 2.0e-118 429.5 299 77.3
Manes.09G163500 Manihot esculenta HOM05D006416 ORTHO05D008054 4.6e-118 428.3 296 76.7
Haze_04238 Corylus avellana HOM05D006416 ORTHO05D008054 7.8e-118 427.6 292 79.8
MELO3C004307.2 Cucumis melo HOM05D006416 ORTHO05D008054 1.0e-117 427.2 298 77.2
ClCG02G016070 Citrullus lanatus HOM05D006416 ORTHO05D008054 1.7e-117 426.4 299 77.3
Cpa.g.sc48.9 Carica papaya HOM05D006416 ORTHO05D008054 3.0e-117 425.6 299 76.3
Cfa006543 Carpinus fangiana HOM05D006416 ORTHO05D008054 3.0e-117 425.6 300 77.3
FAN02G3793 Fragaria x ananassa HOM05D006416 ORTHO05D008054 3.0e-117 425.6 290 77.9
FAN14G2526 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.1e-116 423.7 290 77.6
Potri.013G026400 Populus trichocarpa HOM05D006416 ORTHO05D008054 1.5e-116 423.3 297 76.8
FAN09G2836 Fragaria x ananassa HOM05D006416 ORTHO05D008054 1.9e-116 422.9 290 77.6
Sopen01g042190 Solanum pennellii HOM05D006416 ORTHO05D008054 1.9e-116 422.9 291 74.9
PGSC0003DMG402028574 Solanum tuberosum HOM05D006416 ORTHO05D008054 1.9e-116 422.9 291 75.3
FvH4_6g05320 Fragaria vesca HOM05D006416 ORTHO05D008054 2.5e-116 422.5 290 77.6
FAN05G2936 Fragaria x ananassa HOM05D006416 ORTHO05D008054 2.5e-116 422.5 290 77.6
CANSAT54G1414 Cannabis sativa HOM05D006416 ORTHO05D008054 3.3e-116 422.2 298 76.8
FAN05G0060 Fragaria x ananassa HOM05D006416 ORTHO05D008054 5.6e-116 421.4 290 77.6
RcHm_v2.0_Chr3g0454061 Rosa chinensis HOM05D006416 ORTHO05D008054 5.6e-116 421.4 292 78.4
EL10Ac4g09303 Beta vulgaris HOM05D006416 ORTHO05D008054 7.3e-116 421.0 297 76.1
FAN14G3791 Fragaria x ananassa HOM05D006416 ORTHO05D008054 7.3e-116 421.0 290 77.2
Peaxi162Scf00434g00329 Petunia axillaris HOM05D006416 ORTHO05D008054 7.3e-116 421.0 290 74.5
Atru.chr2.491 Acer truncatum HOM05D006416 ORTHO05D008054 1.6e-115 419.9 300 76.0
Nn4g26146 Nelumbo nucifera HOM05D006416 ORTHO05D008054 1.6e-115 419.9 295 75.3
TAR362G1050 Trochodendron aralioides HOM05D006416 ORTHO05D008054 1.6e-115 419.9 296 75.3
Ciclev10002001m.g Citrus clementina HOM05D006416 ORTHO05D008054 4.7e-115 418.3 300 73.7
Cc02_g32670 Coffea canephora HOM05D006416 ORTHO05D008054 4.7e-115 418.3 296 74.7
Solyc01g098640.3 Solanum lycopersicum HOM05D006416 ORTHO05D008054 4.7e-115 418.3 291 74.2
CAN.G1134.18 Capsicum annuum HOM05D006416 ORTHO05D008054 8.0e-115 417.5 295 73.9
Phvul.007G182400 Phaseolus vulgaris HOM05D006416 ORTHO05D008054 8.0e-115 417.5 296 74.7
TWI12G1406 Tripterygium wilfordii HOM05D006416 ORTHO05D008054 8.0e-115 417.5 296 76.4
Lj9A681T37 Lonicera japonica HOM05D006416 ORTHO05D008054 1.8e-114 416.4 298 75.5
Nitab4.5_0007238g0010 Nicotiana tabacum HOM05D006416 ORTHO05D008054 2.3e-114 416.0 298 73.8
Ca_10088_v3 Cicer arietinum L. HOM05D006416 ORTHO05D008054 4.0e-114 415.2 290 73.8
arahy.Tifrunner.gnm1.ann1.L7FLNG Arachis hypogaea HOM05D006416 ORTHO05D008054 8.9e-114 414.1 287 77.4
Potri.005G038700 Populus trichocarpa HOM05D006416 ORTHO05D008054 8.9e-114 414.1 297 74.7
arahy.Tifrunner.gnm1.ann1.ICF70N Arachis hypogaea HOM05D006416 ORTHO05D008054 1.2e-113 413.7 288 77.8
MD12G1224000 Malus domestica HOM05D006416 ORTHO05D008054 1.2e-113 413.7 292 74.3
MD04G1209400 Malus domestica HOM05D006416 ORTHO05D008054 2.0e-113 412.9 292 74.3
Dinv22903 Davidia involucrata HOM05D006416 ORTHO05D008054 2.6e-113 412.5 229 90.0
Nn1g02093 Nelumbo nucifera HOM05D006416 ORTHO05D008054 2.6e-113 412.5 304 73.0
Sed0000831 Sechium edule HOM05D006416 ORTHO05D008054 2.6e-113 412.5 287 77.0
SGA_v2.0_scaffold204G41638 Striga asiatica HOM05D006416 ORTHO05D008054 7.5e-113 411.0 288 75.7
Sabra05G0037800 Salix brachista HOM05D006416 ORTHO05D008054 1.3e-112 410.2 297 74.4
MBI19_g27532_MAGBIO Magnolia biondii HOM05D006416 ORTHO05D008054 2.2e-112 409.5 298 73.5
Glyma.10G157100 Glycine max HOM05D006416 ORTHO05D008054 2.9e-112 409.1 296 73.6
Nitab4.5_0004940g0060 Nicotiana tabacum HOM05D006416 ORTHO05D008054 2.9e-112 409.1 299 71.9
Psat6g148880 Pisum sativum HOM05D006416 ORTHO05D008054 1.1e-111 407.1 290 73.1
CsaV3_2G004910 Cucumis sativus L. HOM05D006416 ORTHO05D008054 1.4e-111 406.8 313 71.2
Glyma.20G231600 Glycine max HOM05D006416 ORTHO05D008054 1.4e-111 406.8 297 73.7
TPR.G2722 Trifolium pratense HOM05D006416 ORTHO05D008054 1.4e-111 406.8 286 72.7
Lalb_Chr06g0167821 Lupinus albus HOM05D006416 ORTHO05D008054 5.4e-111 404.8 294 73.5
DCAR_029435 Daucus carota HOM05D006416 ORTHO05D008054 7.0e-111 404.4 244 85.7
Lsat_1_v5_gn_8_116020 Lactuca sativa HOM05D006416 ORTHO05D008054 9.2e-111 404.1 295 72.2
MSTRG.2929 Avicennia marina HOM05D006416 ORTHO05D008054 1.6e-110 403.3 287 73.5
SpUn0002_0460 Schrenkiella parvula HOM05D006416 ORTHO05D008054 3.5e-110 402.1 295 73.2
THA.LOC104823736 Tarenaya hassleriana HOM05D006416 ORTHO05D008054 1.0e-109 400.6 298 73.2
CSS0022908 Camellia sinensis var. sinensis HOM05D006416 ORTHO05D008054 1.3e-109 400.2 293 73.7
Medtr1g082420 Medicago truncatula HOM05D006416 ORTHO05D008054 1.7e-109 399.8 294 72.4
Aqoxy2G03216 Aquilegia oxysepala HOM05D006416 ORTHO05D008054 2.3e-109 399.4 294 70.7
Carub.0002s0864 Capsella rubella HOM05D006416 ORTHO05D008054 3.9e-109 398.7 291 72.9
Sc16g0008340 Simmondsia chinensis HOM05D006416 ORTHO05D008054 3.9e-109 398.7 288 75.0
Migut.H00517 Erythranthe guttata HOM05D006416 ORTHO05D008054 2.5e-108 396.0 290 72.1
ATR0626G312 Amborella trichopoda HOM05D006416 ORTHO05D008054 3.3e-108 395.6 299 71.6
AL1G65240 Arabidopsis lyrata HOM05D006416 ORTHO05D008054 3.3e-108 395.6 295 71.9
BcaC09g49606 Brassica carinata HOM05D006416 ORTHO05D008054 9.5e-108 394.0 295 71.5
C01p34560 Brassica napus HOM05D006416 ORTHO05D008054 9.5e-108 394.0 295 71.5
BolC1t03427H Brassica oleracea HOM05D006416 ORTHO05D008054 9.5e-108 394.0 295 71.5
CARHR055910 Cardamine hirsuta HOM05D006416 ORTHO05D008054 2.1e-107 392.9 291 71.8
Aa31LG2G11890 Aethionema arabicum HOM05D006416 ORTHO05D008054 2.8e-107 392.5 292 71.6
AT1G54780 Arabidopsis thaliana HOM05D006416 ORTHO05D008054 8.1e-107 391.0 295 71.5
A01p27150 Brassica napus HOM05D006416 ORTHO05D008054 1.1e-106 390.6 295 71.2
BraA01t02850Z Brassica rapa HOM05D006416 ORTHO05D008054 1.1e-106 390.6 295 71.2
CDE08G0960 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 1.4e-106 390.2 299 71.6
BcaB04g20144 Brassica carinata HOM05D006416 ORTHO05D008054 3.1e-106 389.0 296 70.6
Lj5g0006935 Lotus japonicus HOM05D006416 ORTHO05D008054 4.0e-106 388.7 286 73.8
PSO170G0754 Papaver somniferum HOM05D006416 ORTHO05D008054 4.0e-106 388.7 288 72.6
Thhalv10023632m.g Eutrema salsugineum HOM05D006416 ORTHO05D008054 5.2e-106 388.3 287 71.8
PSO407G0317 Papaver somniferum HOM05D006416 ORTHO05D008054 1.5e-105 386.7 292 71.9
ECA232G3707 Erigeron canadensis HOM05D006416 ORTHO05D008054 9.8e-105 384.0 235 82.6
HanXRQChr15g0486581 Helianthus annuus HOM05D006416 ORTHO05D008054 9.8e-105 384.0 289 72.0
HanXRQChr09g0258731 Helianthus annuus HOM05D006416 ORTHO05D008054 1.7e-104 383.3 295 71.9
CDE02G0677 Ceratophyllum demersum HOM05D006416 ORTHO05D008054 8.3e-104 380.9 295 71.5
unitig_899.g15132 Utricularia gibba HOM05D000909 ORTHO05D000928 1.9e-103 379.8 273 72.5
SalBow1G1453 Salvia bowleyana HOM05D006416 ORTHO05D008054 4.6e-102 375.2 238 79.8
HPP92_006953 Vanilla planifolia HOM05D006416 ORTHO05D008054 4.6e-102 375.2 291 68.0
Os05g0401100 Oryza sativa ssp. japonica HOM05D006416 ORTHO05D008054 2.0e-97 359.8 234 78.6
Zm00001eb346800 Zea mays HOM05D006416 ORTHO05D008054 4.9e-96 355.1 294 67.0
Migut.C00218 Erythranthe guttata HOM05D006416 ORTHO05D008054 1.7e-93 346.7 208 82.7
Pp3c11_19220 Physcomitrium patens HOM05D006416 ORTHO05D008054 6.6e-93 344.7 226 75.7
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.6e-93 344.4 228 76.3
Hma1.2p1_0666F.1_g199430 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 4.7e-91 338.6 232 74.6
Pp3c7_6980 Physcomitrium patens HOM05D006416 ORTHO05D008054 4.7e-91 338.6 226 74.3
SEGI_37406 Sequoiadendron giganteum HOM05D006416 ORTHO05D008054 1.9e-87 326.6 227 72.7
SMO329G0005 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 1.9e-84 316.6 236 66.9
Mapoly0079s0006 Marchantia polymorpha HOM05D006416 ORTHO05D008054 2.6e-81 306.2 259 62.2
SMO353G0282 Selaginella moellendorffii HOM05D006416 ORTHO05D008054 6.9e-74 281.6 203 67.0
CBR_g30711 Chara braunii HOM05D006416 ORTHO05D008054 2.6e-73 279.6 226 62.4
Lalb_Chr02g0148391 Lupinus albus HOM05D006416 ORTHO05D008054 1.1e-66 257.7 212 66.5
Hma1.2p1_0666F.1_g199440 Hydrangea macrophylla HOM05D006416 ORTHO05D008054 1.3e-61 240.7 140 82.9
Aa31LG1G5580 Aethionema arabicum HOM05D006416 ORTHO05D008054 1.9e-60 236.9 137 83.2
Cre03.g182150 Chlamydomonas reinhardtii HOM05D006416 ORTHO05D008054 2.4e-50 203.4 258 41.9
MCO01G659 Micromonas commoda HOM05D006416 ORTHO05D008054 1.0e-48 198.0 202 49.0
PRCOL_00003436 Prasinoderma coloniale HOM05D006416 ORTHO05D008054 7.2e-39 165.2 222 41.0
Dinv23978 Davidia involucrata HOM05D006416 ORTHO05D008054 5.2e-37 159.1 89 91.0
arahy.Tifrunner.gnm1.ann1.SGB0EA Arachis hypogaea HOM05D006416 ORTHO05D008054 9.7e-36 154.8 86 88.4
Lalb_Chr02g0148401 Lupinus albus HOM05D006416 ORTHO05D008054 1.4e-34 151.0 83 90.4
Haze_01725 Corylus avellana HOM05D006416 ORTHO05D008054 7.7e-25 118.6 64 87.5
AUR62000865 Chenopodium quinoa HOM05D006416 ORTHO05D008054 2.4e-10 70.5 78 57.7


User provided reference genes

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