Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G2550 Punica granatum HOM05D005902 ORTHO05D007182 1.0e-105 386.7 189 100.0
CAN.G1464.8 Capsicum annuum HOM05D005902 ORTHO05D007182 1.0e-97 360.1 189 91.0
Cc07_g13000 Coffea canephora HOM05D005902 ORTHO05D007182 1.7e-97 359.4 189 89.4
Nitab4.5_0017196g0010 Nicotiana tabacum HOM05D005902 ORTHO05D007182 6.5e-97 357.5 189 89.9
Solyc05g056560.3 Solanum lycopersicum HOM05D005902 ORTHO05D007182 8.5e-97 357.1 189 90.5
Sopen05g034960 Solanum pennellii HOM05D005902 ORTHO05D007182 8.5e-97 357.1 189 90.5
Manes.05G062600 Manihot esculenta HOM05D005902 ORTHO05D007182 1.1e-96 356.7 189 89.9
Haze_14303 Corylus avellana HOM05D005902 ORTHO05D007182 1.9e-96 355.9 189 89.4
PGSC0003DMG400023318 Solanum tuberosum HOM05D005902 ORTHO05D007182 3.2e-96 355.1 189 90.5
TWI53G1594 Tripterygium wilfordii HOM05D005902 ORTHO05D007182 3.2e-96 355.1 189 89.4
Nitab4.5_0000905g0130 Nicotiana tabacum HOM05D005902 ORTHO05D007182 4.2e-96 354.8 189 89.4
arahy.Tifrunner.gnm1.ann1.YJU2T0 Arachis hypogaea HOM05D005902 ORTHO05D007182 5.5e-96 354.4 191 88.0
CiPaw.03G078000 Carya illinoinensis HOM05D005902 ORTHO05D007182 7.2e-96 354.0 189 88.9
Ciclev10005984m.g Citrus clementina HOM05D005902 ORTHO05D007182 9.4e-96 353.6 189 88.4
arahy.Tifrunner.gnm1.ann1.00Q11I Arachis hypogaea HOM05D005902 ORTHO05D007182 1.2e-95 353.2 191 87.4
Lj2A514T43 Lonicera japonica HOM05D005902 ORTHO05D007182 1.6e-95 352.8 189 88.9
Cfa007771 Carpinus fangiana HOM05D005902 ORTHO05D007182 2.7e-95 352.1 189 88.9
CsaV3_3G020300 Cucumis sativus L. HOM05D005902 ORTHO05D007182 2.7e-95 352.1 189 87.3
MELO3C023753.2 Cucumis melo HOM05D005902 ORTHO05D007182 4.7e-95 351.3 189 87.3
Hma1.2p1_0158F.1_g069840 Hydrangea macrophylla HOM05D005902 ORTHO05D007182 1.0e-94 350.1 188 87.2
Lsat_1_v5_gn_8_111480 Lactuca sativa HOM05D005902 ORTHO05D007182 1.0e-94 350.1 192 88.0
MD17G1258000 Malus domestica HOM05D005902 ORTHO05D007182 1.0e-94 350.1 188 89.4
Peaxi162Scf00525g00623 Petunia axillaris HOM05D005902 ORTHO05D007182 1.8e-94 349.4 188 88.3
ClCG05G012140 Citrullus lanatus HOM05D005902 ORTHO05D007182 2.3e-94 349.0 189 86.2
Atru.chr1.1947 Acer truncatum HOM05D005902 ORTHO05D007182 3.0e-94 348.6 189 87.3
MSTRG.15644 Avicennia marina HOM05D005902 ORTHO05D007182 5.2e-94 347.8 191 86.4
CSS0022144 Camellia sinensis var. sinensis HOM05D005902 ORTHO05D007182 5.2e-94 347.8 189 85.7
Dinv28227 Davidia involucrata HOM05D005902 ORTHO05D007182 5.2e-94 347.8 189 86.8
Nn3g18467 Nelumbo nucifera HOM05D005902 ORTHO05D007182 6.7e-94 347.4 189 84.7
Lalb_Chr10g0104081 Lupinus albus HOM05D005902 ORTHO05D007182 1.2e-93 346.7 194 87.6
Thecc.01G244600 Theobroma cacao HOM05D005902 ORTHO05D007182 1.2e-93 346.7 189 86.8
DCAR_010066 Daucus carota HOM05D005902 ORTHO05D007182 1.5e-93 346.3 189 87.8
TWI74G1040 Tripterygium wilfordii HOM05D005902 ORTHO05D007182 1.5e-93 346.3 189 86.2
MD09G1263000 Malus domestica HOM05D005902 ORTHO05D007182 2.6e-93 345.5 189 88.4
GSVIVG01026316001 Vitis vinifera HOM05D005902 ORTHO05D007182 2.6e-93 345.5 191 85.9
vmacro18518 Vaccinium macrocarpon HOM05D005902 ORTHO05D007182 4.4e-93 344.7 189 84.7
Oeu009432.1 Olea europaea HOM05D005902 ORTHO05D007182 7.5e-93 344.0 192 86.5
RcHm_v2.0_Chr3g0493321 Rosa chinensis HOM05D005902 ORTHO05D007182 9.7e-93 343.6 189 86.8
Duzib187G0521 Durio zibethinus HOM05D005902 ORTHO05D007182 1.3e-92 343.2 189 84.7
QL02p060024 Quercus lobata HOM05D005902 ORTHO05D007182 1.7e-92 342.8 188 87.2
CANSAT80G0886 Cannabis sativa HOM05D005902 ORTHO05D007182 2.8e-92 342.0 193 85.0
HanXRQChr09g0259821 Helianthus annuus HOM05D005902 ORTHO05D007182 2.8e-92 342.0 192 87.0
VMungo0647G1816 Vigna mungo HOM05D005902 ORTHO05D007182 2.8e-92 342.0 190 87.4
FAN26G1601 Fragaria x ananassa HOM05D005902 ORTHO05D007182 3.7e-92 341.7 189 86.2
TAR371G0118 Trochodendron aralioides HOM05D005902 ORTHO05D007182 4.8e-92 341.3 189 85.2
MSTRG.3687 Avicennia marina HOM05D005902 ORTHO05D007182 6.3e-92 340.9 191 85.9
Gohir.D12G002400 Gossypium hirsutum HOM05D005902 ORTHO05D007182 6.3e-92 340.9 189 83.6
MBI13_g21692_MAGBIO Magnolia biondii HOM05D005902 ORTHO05D007182 6.3e-92 340.9 189 83.1
Oeu048966.1 Olea europaea HOM05D005902 ORTHO05D007182 8.2e-92 340.5 192 85.4
Phvul.008G239100 Phaseolus vulgaris HOM05D005902 ORTHO05D007182 8.2e-92 340.5 191 87.4
Rhsim08G0020200 Rhododendron simsii HOM05D005902 ORTHO05D007182 8.2e-92 340.5 189 83.6
Actinidia35717 Actinidia chinensis HOM05D005902 ORTHO05D007182 1.4e-91 339.7 189 84.7
Ca_05775_v3 Cicer arietinum L. HOM05D005902 ORTHO05D007182 1.4e-91 339.7 192 85.9
FAN28G1805 Fragaria x ananassa HOM05D005902 ORTHO05D007182 1.4e-91 339.7 189 85.7
Prupe.3G160700 Prunus persica HOM05D005902 ORTHO05D007182 1.4e-91 339.7 189 86.8
Duzib264G0381 Durio zibethinus HOM05D005902 ORTHO05D007182 2.4e-91 339.0 189 83.1
FAN19G0020 Fragaria x ananassa HOM05D005902 ORTHO05D007182 2.4e-91 339.0 189 85.7
Medtr5g077260 Medicago truncatula HOM05D005902 ORTHO05D007182 2.4e-91 339.0 192 87.0
TPR.G9985 Trifolium pratense HOM05D005902 ORTHO05D007182 2.4e-91 339.0 192 87.0
Gohir.A12G002700 Gossypium hirsutum HOM05D005902 ORTHO05D007182 3.1e-91 338.6 189 83.1
Lalb_Chr17g0345911 Lupinus albus HOM05D005902 ORTHO05D007182 4.1e-91 338.2 194 85.6
Psat2g044640 Pisum sativum HOM05D005902 ORTHO05D007182 4.1e-91 338.2 192 86.5
Sed0000187 Sechium edule HOM05D005902 ORTHO05D007182 4.1e-91 338.2 189 82.5
Glyma.14G211800 Glycine max HOM05D005902 ORTHO05D007182 5.3e-91 337.8 189 86.2
Glyma.02G242000 Glycine max HOM05D005902 ORTHO05D007182 7.0e-91 337.4 189 86.2
Potri.004G082100 Populus trichocarpa HOM05D005902 ORTHO05D007182 7.0e-91 337.4 189 84.1
LjContig00141g0001362 Lotus japonicus HOM05D005902 ORTHO05D007182 1.2e-90 336.7 192 85.4
PSO063G5475 Papaver somniferum HOM05D005902 ORTHO05D007182 1.6e-90 336.3 189 82.5
THA.LOC104822070 Tarenaya hassleriana HOM05D005902 ORTHO05D007182 2.0e-90 335.9 192 81.8
Cpa.g.sc178.4 Carica papaya HOM05D005902 ORTHO05D007182 2.7e-90 335.5 189 83.1
Sabra04G0054600 Salix brachista HOM05D005902 ORTHO05D007182 2.7e-90 335.5 189 83.6
Aqoxy3G04009 Aquilegia oxysepala HOM05D005902 ORTHO05D007182 5.9e-90 334.3 190 81.6
SalBow5G2060 Salvia bowleyana HOM05D005902 ORTHO05D007182 5.9e-90 334.3 190 84.2
BraA07t30938Z Brassica rapa HOM05D005902 ORTHO05D007182 7.7e-90 334.0 191 83.8
BcaC08g46080 Brassica carinata HOM05D005902 ORTHO05D007182 1.7e-89 332.8 191 83.8
BolC6t39030H Brassica oleracea HOM05D005902 ORTHO05D007182 1.7e-89 332.8 191 83.8
Migut.K01111 Erythranthe guttata HOM05D005902 ORTHO05D007182 1.7e-89 332.8 191 83.8
SGA_v2.0_scaffold45G17133 Striga asiatica HOM05D005902 ORTHO05D007182 2.2e-89 332.4 191 82.7
BcaB05g24153 Brassica carinata HOM05D005902 ORTHO05D007182 2.9e-89 332.0 191 83.2
C06p39370 Brassica napus HOM05D005902 ORTHO05D007182 2.9e-89 332.0 191 83.2
Gorai.008G001800 Gossypium raimondii HOM05D005902 ORTHO05D007182 2.9e-89 332.0 184 83.2
C02p21750 Brassica napus HOM05D005902 ORTHO05D007182 5.0e-89 331.3 191 83.2
BcaB03g15295 Brassica carinata HOM05D005902 ORTHO05D007182 6.5e-89 330.9 189 84.1
A07p33100 Brassica napus HOM05D005902 ORTHO05D007182 6.5e-89 330.9 191 83.2
Aa31LG2G2820 Aethionema arabicum HOM05D005902 ORTHO05D007182 8.5e-89 330.5 191 83.2
PSO782G1752 Papaver somniferum HOM05D005902 ORTHO05D007182 8.5e-89 330.5 189 82.0
A02p13450 Brassica napus HOM05D005902 ORTHO05D007182 1.1e-88 330.1 191 82.7
BraA02t06403Z Brassica rapa HOM05D005902 ORTHO05D007182 1.1e-88 330.1 191 82.7
EL10Ac2g03874 Beta vulgaris HOM05D005902 ORTHO05D007182 1.9e-88 329.3 191 82.2
AUR62009143 Chenopodium quinoa HOM05D005902 ORTHO05D007182 3.2e-88 328.6 189 81.0
ECA240G4510 Erigeron canadensis HOM05D005902 ORTHO05D007182 4.2e-88 328.2 194 82.0
Hund03335 Selenicereus undatus HOM05D005902 ORTHO05D007182 4.2e-88 328.2 190 81.6
Sc09g0004530 Simmondsia chinensis HOM05D005902 ORTHO05D007182 5.5e-88 327.8 192 80.2
AUR62039116 Chenopodium quinoa HOM05D005902 ORTHO05D007182 7.2e-88 327.4 189 81.0
AL2G23690 Arabidopsis lyrata HOM05D005902 ORTHO05D007182 1.6e-87 326.2 191 81.2
Thhalv10019182m.g Eutrema salsugineum HOM05D005902 ORTHO05D007182 1.6e-87 326.2 191 82.2
AT1G66080 Arabidopsis thaliana HOM05D005902 ORTHO05D007182 2.1e-87 325.9 191 81.2
Carub.0002s1207 Capsella rubella HOM05D005902 ORTHO05D007182 2.1e-87 325.9 191 81.7
Sed0027099 Sechium edule HOM05D005902 ORTHO05D007182 4.7e-87 324.7 189 83.6
CARHR058040 Cardamine hirsuta HOM05D005902 ORTHO05D007182 8.0e-87 323.9 191 80.1
COL.COLO4_08161 Corchorus olitorius HOM05D005902 ORTHO05D007182 1.8e-86 322.8 178 86.5
unitig_748.g7250 Utricularia gibba HOM05D005902 ORTHO05D007182 1.8e-86 322.8 188 81.4
ATR0598G055 Amborella trichopoda HOM05D005902 ORTHO05D007182 3.4e-85 318.5 189 79.4
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 4.4e-85 318.2 188 79.3
CDE05G1035 Ceratophyllum demersum HOM05D005902 ORTHO05D007182 1.4e-83 313.2 189 78.8
CDE05G2622 Ceratophyllum demersum HOM05D005902 ORTHO05D007182 1.2e-82 310.1 189 78.3
TAR629G3091 Trochodendron aralioides HOM05D005902 ORTHO05D007182 1.9e-72 276.2 156 83.3
SMO278G0026 Selaginella moellendorffii HOM05D005902 ORTHO05D007182 9.5e-72 273.9 186 64.5
AagrBONN_evm.TU.Sc2ySwM_344.787 Anthoceros agrestis HOM05D005902 ORTHO05D007182 2.8e-71 272.3 191 68.1
Sp5g21150 Schrenkiella parvula HOM05D005902 ORTHO05D007182 2.3e-70 269.2 158 82.3
Ah.10g034300 Amaranthus hybridus HOM05D005902 ORTHO05D007182 5.8e-69 264.6 157 80.9
Mapoly0006s0187 Marchantia polymorpha HOM05D005902 ORTHO05D007182 2.4e-67 259.2 189 65.6
FvH4_1g28840 Fragaria vesca HOM05D005902 ORTHO05D007182 6.0e-66 254.6 146 84.9
Pp3c27_3020 Physcomitrium patens HOM05D005902 ORTHO05D007182 1.7e-65 253.1 190 63.2
CSS0046217 Camellia sinensis var. sinensis HOM05D005902 ORTHO05D007182 6.6e-65 251.1 147 80.3
Pp3c16_2230 Physcomitrium patens HOM05D005902 ORTHO05D007182 5.2e-62 241.5 190 61.1
Pp3c3_23430 Physcomitrium patens HOM05D005902 ORTHO05D007182 7.8e-58 227.6 183 55.2
Pp3c10_12120 Physcomitrium patens HOM05D005902 ORTHO05D007182 5.1e-57 224.9 183 55.2
SMO367G0342 Selaginella moellendorffii HOM05D005902 ORTHO05D007182 3.3e-56 222.2 190 52.6
HPP92_002287 Vanilla planifolia HOM05D005902 ORTHO05D007182 3.1e-54 215.7 154 67.5
CBR_g54208 Chara braunii HOM05D005902 ORTHO05D007182 4.1e-51 205.3 189 54.5
Mapoly0001s0397 Marchantia polymorpha HOM05D005902 ORTHO05D007182 4.1e-51 205.3 187 52.4
CSS0023311 Camellia sinensis var. sinensis HOM05D005902 ORTHO05D007182 1.3e-49 200.3 182 58.8
CBR_g54207 Chara braunii HOM05D005902 ORTHO05D007182 2.1e-47 193.0 181 50.3
Os03g0237500 Oryza sativa ssp. japonica HOM05D005902 ORTHO05D007182 1.9e-43 179.9 189 52.4
Zm00001eb010060 Zea mays HOM05D005902 ORTHO05D007182 1.2e-42 177.2 187 49.7
BcaC03g14730 Brassica carinata HOM05D005902 ORTHO05D007182 1.1e-38 164.1 94 84.0
MD03G1052600 Malus domestica HOM05D005902 ORTHO05D007182 3.8e-36 155.6 91 82.4
MD01G1041600 Malus domestica HOM05D005902 ORTHO05D007182 1.3e-28 130.6 79 79.7
MCO11G231 Micromonas commoda HOM05D005902 ORTHO05D007182 1.2e-26 124.0 184 37.5
Cre16.g691215 Chlamydomonas reinhardtii HOM05D005902 ORTHO05D007182 1.3e-23 114.0 185 33.5
MD16G1261800 Malus domestica HOM05D005902 ORTHO05D007182 2.0e-21 106.7 51 92.2
PRCOL_00005463 Prasinoderma coloniale HOM05D005902 ORTHO05D007182 1.4e-11 73.9 160 31.9
CSS0027287 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 8.7e-09 64.7 31 87.1
BolC2t08309H Brassica oleracea HOM05D005902 ORTHO05D007182 2.8e-07 59.7 28 89.3


User provided reference genes

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