Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G2486 Punica granatum HOM05D023640 ORTHO05D019592 4.2e-135 484.6 225 100.0
PGR031G3557 Punica granatum HOM05D023640 ORTHO05D019592 9.6e-39 164.5 107 71.0
PGR031G1999 Punica granatum HOM05D006839 ORTHO05D007872 1.3e-30 137.5 221 37.6
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 1.0e-27 127.9 218 34.4
PGR005G0005 Punica granatum HOM05D023640 ORTHO05D019592 4.1e-21 105.9 117 47.0
PGR142G2171 Punica granatum HOM05D023640 ORTHO05D019592 1.2e-20 104.4 117 46.2
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.5e-18 96.7 233 28.8
PGR031G1100 Punica granatum HOM05D023640 ORTHO05D007872 4.4e-15 85.9 101 49.5
Medtr1g104890 Medicago truncatula HOM05D000022 ORTHO05D000071 2.4e-13 80.1 228 29.4
PSO384G2659 Papaver somniferum HOM05D000655 ORTHO05D001635 5.3e-13 79.0 227 26.9
TPR.G8967 Trifolium pratense HOM05D000022 ORTHO05D000071 5.3e-13 79.0 228 29.4
PSO135G0843 Papaver somniferum HOM05D000655 ORTHO05D001635 7.0e-13 78.6 227 26.9
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.6e-12 77.4 114 38.6
Oeu060516.1 Olea europaea HOM05D000655 ORTHO05D001635 2.6e-12 76.6 220 26.8
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 3.5e-12 76.3 110 37.3
Lj1g0023406 Lotus japonicus HOM05D000655 ORTHO05D001635 5.9e-12 75.5 221 28.1
Lj5g0018540 Lotus japonicus HOM05D000655 ORTHO05D001635 1.3e-11 74.3 224 26.8
SEGI_14968 Sequoiadendron giganteum HOM05D000022 ORTHO05D000306 1.3e-11 74.3 230 28.3
unitig_749.g13732 Utricularia gibba HOM05D000655 ORTHO05D001635 2.9e-11 73.2 219 28.3
Potri.004G024900 Populus trichocarpa HOM05D000022 ORTHO05D000071 3.8e-11 72.8 231 25.5
Potri.004G025900 Populus trichocarpa HOM05D000022 ORTHO05D000071 3.8e-11 72.8 231 25.5
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 1.1e-10 71.2 115 40.9
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 1.1e-10 71.2 115 40.9
Sabra04G0014000 Salix brachista HOM05D000022 ORTHO05D000306 2.5e-10 70.1 239 25.1
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 3.2e-10 69.7 97 39.2
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 4.2e-10 69.3 97 38.1
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 7.2e-10 68.6 134 32.8
Manes.17G029800 Manihot esculenta HOM05D000022 ORTHO05D000071 9.4e-10 68.2 228 28.9
PSO541G6251 Papaver somniferum HOM05D000022 ORTHO05D000071 9.4e-10 68.2 227 23.8
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 9.4e-10 68.2 104 35.6
CSS0015773 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000071 1.2e-09 67.8 226 24.8
A03p54200 Brassica napus HOM05D000022 ORTHO05D000071 1.6e-09 67.4 231 27.7
Psat6g208880 Pisum sativum HOM05D000022 ORTHO05D000071 2.1e-09 67.0 228 26.8
AagrBONN_evm.TU.Sc2ySwM_344.366 Anthoceros agrestis HOM05D006839 ORTHO05D007872 4.7e-09 65.9 129 31.8
ECA233G4580 Erigeron canadensis HOM05D000655 ORTHO05D001166 6.1e-09 65.5 215 24.2
CiPaw.09G083800 Carya illinoinensis HOM05D000022 ORTHO05D000071 8.0e-09 65.1 227 23.8
Nitab4.5_0002531g0040 Nicotiana tabacum HOM05D000022 ORTHO05D020325 8.0e-09 65.1 199 30.7
QL09p026146 Quercus lobata HOM05D000022 ORTHO05D000071 8.0e-09 65.1 213 26.8
VMungo0720G3078 Vigna mungo HOM05D000022 ORTHO05D000306 8.0e-09 65.1 242 27.7
Nitab4.5_0002531g0020 Nicotiana tabacum HOM05D000022 ORTHO05D000071 1.0e-08 64.7 229 28.8
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.0e-08 64.7 111 36.9
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 1.4e-08 64.3 119 36.1
Duzib052G0685 Durio zibethinus HOM05D000022 ORTHO05D000071 1.4e-08 64.3 208 27.9
PSO732G0169 Papaver somniferum HOM05D000022 ORTHO05D000071 1.8e-08 63.9 225 24.9
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.8e-08 63.9 82 41.5
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 2.3e-08 63.5 136 31.6
CSS0016669 Camellia sinensis var. sinensis HOM05D000022 ORTHO05D000306 3.0e-08 63.2 225 25.8
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 3.0e-08 63.2 113 36.3
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 3.0e-08 63.2 113 36.3
Thecc.02G161700 Theobroma cacao HOM05D000022 ORTHO05D000071 3.0e-08 63.2 205 26.8
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 5.2e-08 62.4 113 35.4
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 5.2e-08 62.4 113 36.3
Nn1g06987 Nelumbo nucifera HOM05D000022 ORTHO05D000071 6.7e-08 62.0 227 27.3
PSO732G0818 Papaver somniferum HOM05D000022 ORTHO05D000071 6.7e-08 62.0 222 24.8
PGR142G4476 Punica granatum HOM05D006839 ORTHO05D007872 6.7e-08 62.0 110 40.0
GSVIVG01015799001 Vitis vinifera HOM05D000022 ORTHO05D000071 6.7e-08 62.0 179 28.5
arahy.Tifrunner.gnm1.ann1.X8WSRG Arachis hypogaea HOM05D000655 ORTHO05D001166 8.8e-08 61.6 221 22.6
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 8.8e-08 61.6 113 35.4
PGR083G0613 Punica granatum HOM05D006839 ORTHO05D007872 8.8e-08 61.6 106 34.0
TAR626G0513 Trochodendron aralioides HOM05D000022 ORTHO05D000071 8.8e-08 61.6 227 26.0
VMungo0251G1677 Vigna mungo HOM05D001822 ORTHO05D001744 8.8e-08 61.6 212 26.9
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.1e-07 61.2 116 35.3
PSO732G0621 Papaver somniferum HOM05D000022 ORTHO05D000071 1.1e-07 61.2 223 23.3
Sabra11G0017900 Salix brachista HOM05D000022 ORTHO05D000306 1.1e-07 61.2 231 24.2
AagrBONN_evm.TU.Sc2ySwM_344.1627 Anthoceros agrestis HOM05D032606 ORTHO05D007872 1.5e-07 60.8 113 36.3
ClCG06G000550 Citrullus lanatus HOM05D000655 ORTHO05D001166 1.5e-07 60.8 215 23.3
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 1.5e-07 60.8 116 34.5
Prupe.6G140400 Prunus persica HOM05D000022 ORTHO05D000071 1.5e-07 60.8 231 26.0
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 1.5e-07 60.8 134 31.3
Glyma.20G140700 Glycine max HOM05D000022 ORTHO05D000071 2.0e-07 60.5 217 26.7
Phvul.007G049500 Phaseolus vulgaris HOM05D000022 ORTHO05D000071 2.0e-07 60.5 226 27.0
Phvul.007G051500 Phaseolus vulgaris HOM05D000022 ORTHO05D000071 2.0e-07 60.5 205 27.3
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 2.0e-07 60.5 115 34.8
FAN24G0706 Fragaria x ananassa HOM05D000022 ORTHO05D000071 2.6e-07 60.1 230 26.1
MBI18_g23782_MAGBIO Magnolia biondii HOM05D000022 ORTHO05D000071 2.6e-07 60.1 198 25.8
QL08p032475 Quercus lobata HOM05D000022 ORTHO05D000071 2.6e-07 60.1 218 24.8
QL11p008909 Quercus lobata HOM05D000022 ORTHO05D000071 2.6e-07 60.1 221 26.2
Sc05g0008790 Simmondsia chinensis HOM05D000022 ORTHO05D000306 2.6e-07 60.1 203 27.6
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 3.3e-07 59.7 133 35.3
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 3.3e-07 59.7 116 34.5
FAN27G2441 Fragaria x ananassa HOM05D000022 ORTHO05D000071 3.3e-07 59.7 229 25.3
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.3e-07 59.7 122 35.2
TWI38G0054 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 3.3e-07 59.7 226 23.5
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 3.3e-07 59.7 74 44.6
COL.COLO4_08121 Corchorus olitorius HOM05D000022 ORTHO05D000071 4.4e-07 59.3 226 25.7
MELO3C022487.2 Cucumis melo HOM05D000655 ORTHO05D001166 4.4e-07 59.3 217 23.5
Nn1g06968 Nelumbo nucifera HOM05D000022 ORTHO05D000071 4.4e-07 59.3 230 27.4
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 4.4e-07 59.3 76 36.8
Rhsim13G0160200 Rhododendron simsii HOM05D000022 ORTHO05D000306 4.4e-07 59.3 215 27.0
Dinv18897 Davidia involucrata HOM05D000022 ORTHO05D000306 5.7e-07 58.9 205 26.8
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 5.7e-07 58.9 117 35.0
FvH4_2g29871 Fragaria vesca HOM05D000022 ORTHO05D000071 5.7e-07 58.9 230 26.1
Glyma.05G235200 Glycine max HOM05D000655 ORTHO05D001166 5.7e-07 58.9 208 25.0
RcHm_v2.0_Chr4g0443311 Rosa chinensis HOM05D000655 ORTHO05D001166 5.7e-07 58.9 220 23.6
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 5.7e-07 58.9 118 34.7
CiPaw.09G086100 Carya illinoinensis HOM05D000022 ORTHO05D000071 7.5e-07 58.5 202 27.7
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 7.5e-07 58.5 116 34.5
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 7.5e-07 58.5 115 33.0
MD13G1029600 Malus domestica HOM05D000655 ORTHO05D001166 7.5e-07 58.5 219 27.4
QL05p075354 Quercus lobata HOM05D000022 ORTHO05D000071 7.5e-07 58.5 231 23.4
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 9.7e-07 58.2 114 36.0
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 1.3e-06 57.8 112 33.9
Medtr8g104990 Medicago truncatula HOM05D000655 ORTHO05D001166 1.3e-06 57.8 211 23.2
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 1.3e-06 57.8 117 32.5
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.3e-06 57.8 121 34.7
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 1.7e-06 57.4 73 43.8
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 1.7e-06 57.4 115 33.9
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 2.2e-06 57.0 112 32.1
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 2.2e-06 57.0 114 33.3
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 2.2e-06 57.0 116 33.6
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 2.2e-06 57.0 122 37.7
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 2.2e-06 57.0 122 33.6
Potri.011G028100 Populus trichocarpa HOM05D000022 ORTHO05D000071 2.2e-06 57.0 221 25.3
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 2.2e-06 57.0 112 34.8
Ca_17287_v3 Cicer arietinum L. HOM05D000655 ORTHO05D001166 2.8e-06 56.6 217 22.6
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.8e-06 56.6 107 34.6
Ca_10988_v3 Cicer arietinum L. HOM05D000022 ORTHO05D000071 3.7e-06 56.2 201 25.9
Ca_30223_v3 Cicer arietinum L. HOM05D000022 ORTHO05D000071 3.7e-06 56.2 201 25.9
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 3.7e-06 56.2 72 47.2
Gohir.A07G197100 Gossypium hirsutum HOM05D000022 ORTHO05D000306 3.7e-06 56.2 216 25.0
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 3.7e-06 56.2 72 44.4
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 3.7e-06 56.2 72 44.4
CsaV3_1G011140 Cucumis sativus L. HOM05D000022 ORTHO05D000071 4.8e-06 55.8 220 24.1
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 4.8e-06 55.8 72 43.1
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 4.8e-06 55.8 115 32.2
Glyma.08G042600 Glycine max HOM05D000655 ORTHO05D001166 4.8e-06 55.8 199 25.6
AagrBONN_evm.TU.Sc2ySwM_344.5657 Anthoceros agrestis HOM05D032874 ORTHO05D019592 8.2e-06 55.1 113 27.4
AagrBONN_evm.TU.Sc2ySwM_344.5659 Anthoceros agrestis HOM05D032874 ORTHO05D019592 8.2e-06 55.1 113 27.4
EL10Ac8g19943 Beta vulgaris HOM05D000022 ORTHO05D000071 8.2e-06 55.1 179 27.4
FAN15G0188 Fragaria x ananassa HOM05D000022 ORTHO05D000071 8.2e-06 55.1 229 24.5


User provided reference genes

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