Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G2056 Punica granatum HOM05D003683 ORTHO05D004143 8.2e-79 297.0 149 100.0
Gohir.A12G102100 Gossypium hirsutum HOM05D003683 ORTHO05D004143 9.0e-09 64.3 85 51.8
Manes.01G264900 Manihot esculenta HOM05D003683 ORTHO05D004143 1.5e-08 63.5 105 45.7
CiPaw.01G260700 Carya illinoinensis HOM05D003683 ORTHO05D004143 2.0e-08 63.2 83 54.2
GSVIVG01027629001 Vitis vinifera HOM05D003683 ORTHO05D004143 3.4e-08 62.4 86 53.5
Gohir.D12G105300 Gossypium hirsutum HOM05D003683 ORTHO05D004143 4.5e-08 62.0 78 44.9
Gorai.008G114600 Gossypium raimondii HOM05D003683 ORTHO05D004143 4.5e-08 62.0 79 49.4
Potri.002G149600 Populus trichocarpa HOM05D003683 ORTHO05D004143 2.2e-07 59.7 92 52.2
COL.COLO4_12571 Corchorus olitorius HOM05D003683 ORTHO05D004143 3.8e-07 58.9 87 46.0
Cfa001703 Carpinus fangiana HOM05D003683 ORTHO05D004143 4.9e-07 58.5 93 49.5
Nn4g26435 Nelumbo nucifera HOM05D003683 ORTHO05D004143 4.9e-07 58.5 45 64.4
Carub.0005s2764 Capsella rubella HOM05D003683 ORTHO05D004143 6.4e-07 58.2 92 43.5
Duzib133G0707 Durio zibethinus HOM05D003683 ORTHO05D004143 6.4e-07 58.2 90 50.0
Hma1.2p1_0138F.1_g062970 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 6.4e-07 58.2 108 37.0
AT3G60890 Arabidopsis thaliana HOM05D003683 ORTHO05D004143 8.4e-07 57.8 98 39.8
Potri.014G071200 Populus trichocarpa HOM05D003683 ORTHO05D004143 1.1e-06 57.4 92 46.7
PGSC0003DMG400003921 Solanum tuberosum HOM05D003683 ORTHO05D004143 1.1e-06 57.4 67 47.8
CiPaw.12G102800 Carya illinoinensis HOM05D003683 ORTHO05D004143 1.4e-06 57.0 77 42.9
Duzib138G1197 Durio zibethinus HOM05D003683 ORTHO05D004143 1.4e-06 57.0 107 41.1
Thhalv10001694m.g Eutrema salsugineum HOM05D003683 ORTHO05D004143 1.4e-06 57.0 81 48.1
Hma1.2p1_3528F.1_g336600 Hydrangea macrophylla HOM05D003683 ORTHO05D004143 1.4e-06 57.0 111 38.7
Dinv43725 Davidia involucrata HOM05D003683 ORTHO05D004143 1.9e-06 56.6 91 46.2
Phvul.010G085600 Phaseolus vulgaris HOM05D003683 ORTHO05D004143 1.9e-06 56.6 84 45.2
Sopen08g003530 Solanum pennellii HOM05D003683 ORTHO05D004143 1.9e-06 56.6 104 39.4
Dinv37740 Davidia involucrata HOM05D003683 ORTHO05D004143 2.4e-06 56.2 104 38.5
BcaB02g07396 Brassica carinata HOM05D003683 ORTHO05D004143 3.2e-06 55.8 98 42.9
Thhalv10006309m.g Eutrema salsugineum HOM05D003683 ORTHO05D004143 4.2e-06 55.5 98 41.8
FAN06G2934 Fragaria x ananassa HOM05D003683 ORTHO05D004143 4.2e-06 55.5 99 41.4
CiPaw.02G166400 Carya illinoinensis HOM05D003683 ORTHO05D004143 7.1e-06 54.7 71 52.1
Dinv32390 Davidia involucrata HOM05D003683 ORTHO05D004143 7.1e-06 54.7 86 46.5
FAN10G1839 Fragaria x ananassa HOM05D003683 ORTHO05D004143 7.1e-06 54.7 92 42.4
Glyma.18G221800 Glycine max HOM05D003683 ORTHO05D004143 7.1e-06 54.7 99 38.4
Solyc08g079690.4 Solanum lycopersicum HOM05D003683 ORTHO05D004143 7.1e-06 54.7 66 45.5
Cfa012041 Carpinus fangiana HOM05D003683 ORTHO05D004143 9.3e-06 54.3 46 60.9
Lj2A204T52 Lonicera japonica HOM05D003683 ORTHO05D004143 9.3e-06 54.3 85 43.5
Manes.02G031900 Manihot esculenta HOM05D003683 ORTHO05D004143 9.3e-06 54.3 50 56.0
Oeu064712.1 Olea europaea HOM05D003683 ORTHO05D004143 9.3e-06 54.3 69 50.7
Potri.003G117200 Populus trichocarpa HOM05D003683 ORTHO05D004143 9.3e-06 54.3 46 58.7
Sp5g02360 Schrenkiella parvula HOM05D003683 ORTHO05D004143 9.3e-06 54.3 98 44.9
Sopen08g028050 Solanum pennellii HOM05D003683 ORTHO05D004143 9.3e-06 54.3 66 43.9
PGSC0003DMG400012487 Solanum tuberosum HOM05D003683 ORTHO05D004143 9.3e-06 54.3 104 38.5


User provided reference genes

Program Settings