Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G2054 Punica granatum HOM05D008545 ORTHO05D010341 2.7e-132 475.3 236 100.0
Duzib138G0500 Durio zibethinus HOM05D008545 ORTHO05D010341 3.0e-43 179.5 245 43.3
Eucgr.D02345 Eucalyptus grandis HOM05D008545 ORTHO05D010341 6.8e-43 178.3 216 47.2
Thecc.01G347700 Theobroma cacao HOM05D008545 ORTHO05D010341 1.5e-42 177.2 246 43.5
Gohir.A07G139700 Gossypium hirsutum HOM05D008545 ORTHO05D010341 1.6e-39 167.2 249 41.8
Gohir.D07G144800 Gossypium hirsutum HOM05D008545 ORTHO05D010341 1.6e-39 167.2 249 41.8
Gorai.001G156800 Gossypium raimondii HOM05D008545 ORTHO05D010341 1.6e-39 167.2 249 41.8
Atru.chr5.619 Acer truncatum HOM05D008545 ORTHO05D010341 8.6e-38 161.4 242 41.3
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 1.5e-37 160.6 245 42.9
Potri.002G167500 Populus trichocarpa HOM05D008545 ORTHO05D010341 5.6e-37 158.7 247 43.3
GSVIVG01027047001 Vitis vinifera HOM05D008545 ORTHO05D010341 8.0e-36 154.8 238 41.6
Manes.01G249300 Manihot esculenta HOM05D008545 ORTHO05D010341 4.0e-35 152.5 239 42.7
Dinv43892 Davidia involucrata HOM05D008545 ORTHO05D010341 1.7e-33 147.1 214 44.4
Potri.014G094600 Populus trichocarpa HOM05D008545 ORTHO05D010341 6.4e-33 145.2 247 38.5
Lj9A592T71 Lonicera japonica HOM05D008545 ORTHO05D010341 1.0e-30 137.9 250 38.0
Nitab4.5_0002262g0100 Nicotiana tabacum HOM05D008545 ORTHO05D010341 3.9e-30 136.0 223 40.4
Lj7A504G55 Lonicera japonica HOM05D008545 ORTHO05D010341 5.6e-29 132.1 238 37.8
CSS0024380 Camellia sinensis var. sinensis HOM05D008545 ORTHO05D010341 9.5e-29 131.3 255 38.4
Peaxi162Scf00403g00718 Petunia axillaris HOM05D008545 ORTHO05D010341 4.4e-26 122.5 193 40.9
PGSC0003DMG400033878 Solanum tuberosum HOM05D008545 ORTHO05D010341 8.3e-25 118.2 236 36.9
Solyc05g050240.3 Solanum lycopersicum HOM05D008545 ORTHO05D010341 1.4e-24 117.5 188 39.9
MD07G1144400 Malus domestica HOM05D008545 ORTHO05D010341 7.0e-24 115.2 229 36.2
CAN.G310.5 Capsicum annuum HOM05D008545 ORTHO05D010341 9.2e-24 114.8 195 37.4
Prupe.2G183300 Prunus persica HOM05D008545 ORTHO05D010341 1.6e-23 114.0 212 38.2
Sabra14G0069200 Salix brachista HOM05D008545 ORTHO05D010341 1.3e-22 110.9 130 47.7
FvH4_7g15870 Fragaria vesca HOM05D008545 ORTHO05D010341 1.5e-21 107.5 229 34.5
CANSAT56G3993 Cannabis sativa HOM05D008545 ORTHO05D010341 4.3e-21 105.9 242 32.6
RcHm_v2.0_Chr1g0358691 Rosa chinensis HOM05D008545 ORTHO05D010341 5.6e-21 105.5 228 35.1
FAN06G5050 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.2e-20 104.4 229 34.1
DCAR_016077 Daucus carota HOM05D009167 ORTHO05D010341 1.6e-20 104.0 245 35.1
FAN03G1297 Fragaria x ananassa HOM05D008545 ORTHO05D010341 4.7e-20 102.4 229 34.5
FAN10G0919 Fragaria x ananassa HOM05D008545 ORTHO05D010341 6.2e-20 102.1 226 32.3
FAN10G3148 Fragaria x ananassa HOM05D008545 ORTHO05D010341 8.1e-20 101.7 226 32.3
Actinidia20194 Actinidia chinensis HOM05D008545 ORTHO05D010341 3.1e-19 99.8 243 35.0
FAN01G1302 Fragaria x ananassa HOM05D008545 ORTHO05D010341 8.9e-19 98.2 229 32.8
Nitab4.5_0003779g0040 Nicotiana tabacum HOM05D008545 ORTHO05D010341 5.8e-18 95.5 208 32.7
Sopen05g028690 Solanum pennellii HOM05D008545 ORTHO05D010341 6.4e-17 92.0 141 41.8
MSTRG.17319 Avicennia marina HOM05D008545 ORTHO05D010341 4.1e-16 89.4 247 33.6
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 1.6e-15 87.4 264 32.2
Hma1.2p1_0384F.1_g141050 Hydrangea macrophylla HOM05D008545 ORTHO05D010341 7.8e-15 85.1 95 48.4
SGA_v2.0_scaffold5G02985 Striga asiatica HOM05D008545 ORTHO05D010341 6.6e-14 82.0 235 31.1
MD01G1075500 Malus domestica HOM05D008545 ORTHO05D010341 1.5e-13 80.9 92 44.6
COL.COLO4_06334 Corchorus olitorius HOM05D002314 ORTHO05D002538 5.6e-13 79.0 71 49.3
Migut.B01833 Erythranthe guttata HOM05D008545 ORTHO05D010341 4.0e-11 72.8 116 37.1
DCAR_016072 Daucus carota HOM05D008545 ORTHO05D010341 2.0e-10 70.5 188 30.9
Nn1g01793 Nelumbo nucifera HOM05D008545 ORTHO05D010341 2.6e-10 70.1 165 30.9
CANSAT56G3625 Cannabis sativa HOM05D008545 ORTHO05D010341 1.1e-08 64.7 72 43.1
Actinidia10102 Actinidia chinensis HOM05D008545 ORTHO05D010341 7.1e-08 62.0 126 37.3
FAN06G3211 Fragaria x ananassa HOM05D008545 ORTHO05D010341 9.2e-08 61.6 165 32.7
SalBow3G1564 Salvia bowleyana HOM05D008545 ORTHO05D010341 1.7e-06 57.4 239 27.6
A09p10890 Brassica napus HOM05D001401 ORTHO05D006368 5.1e-06 55.8 142 29.6
Lsat_1_v5_gn_5_118161 Lactuca sativa HOM05D001401 ORTHO05D006368 6.6e-06 55.5 120 34.2


User provided reference genes

Program Settings