Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 9.5e-73 276.9 161 100.0
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 1.7e-53 213.0 162 82.1
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 1.7e-53 213.0 162 82.1
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 3.8e-53 211.8 162 80.9
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 1.9e-52 209.5 162 80.2
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 2.4e-52 209.1 162 77.8
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 7.1e-52 207.6 162 79.6
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 1.6e-51 206.5 162 77.2
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 2.1e-51 206.1 165 77.6
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 2.1e-51 206.1 162 79.0
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 2.7e-51 205.7 161 77.6
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 2.7e-51 205.7 160 79.4
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 4.6e-51 204.9 162 78.4
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 6.0e-51 204.5 162 79.6
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 1.3e-50 203.4 163 77.3
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 2.3e-50 202.6 166 75.9
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 2.3e-50 202.6 162 76.5
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 2.3e-50 202.6 162 77.8
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 2.3e-50 202.6 162 78.4
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 3.0e-50 202.2 163 78.5
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 5.1e-50 201.4 162 77.8
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 1.5e-49 199.9 162 75.9
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 3.3e-49 198.7 155 80.0
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 3.3e-49 198.7 162 75.9
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 3.3e-49 198.7 155 80.6
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 4.3e-49 198.4 162 75.9
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 7.4e-49 197.6 165 77.6
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 9.6e-49 197.2 162 74.7
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 1.6e-48 196.4 162 77.2
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 2.1e-48 196.1 162 75.3
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 4.8e-48 194.9 161 77.0
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 6.2e-48 194.5 162 77.2
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 8.1e-48 194.1 162 74.7
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 8.1e-48 194.1 164 76.2
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 1.8e-47 193.0 155 78.1
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 2.4e-47 192.6 162 74.7
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 3.1e-47 192.2 162 73.5
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 4.0e-47 191.8 164 75.6
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.5e-46 189.9 162 72.8
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 2.0e-46 189.5 173 73.4
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 2.0e-46 189.5 162 72.8
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 2.6e-46 189.1 160 73.8
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 3.4e-46 188.7 164 72.6
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 4.5e-46 188.3 160 73.1
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 7.6e-46 187.6 171 71.9
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 7.6e-46 187.6 153 77.8
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 9.9e-46 187.2 159 73.0
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 9.9e-46 187.2 156 75.6
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 2.2e-45 186.0 160 75.6
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 2.9e-45 185.7 160 73.1
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 6.4e-45 184.5 156 76.3
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 8.4e-45 184.1 159 74.8
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 8.4e-45 184.1 162 73.5
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 8.4e-45 184.1 160 71.9
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 1.1e-44 183.7 155 76.8
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 1.4e-44 183.3 155 75.5
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 3.2e-44 182.2 164 73.8
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 5.5e-44 181.4 161 69.6
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 5.5e-44 181.4 162 73.5
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 7.9e-43 177.6 160 71.2
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 1.3e-42 176.8 159 71.7
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 1.8e-42 176.4 156 73.7
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 2.3e-42 176.0 153 69.9
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 3.0e-42 175.6 156 69.9
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 3.0e-42 175.6 201 62.2
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 6.7e-42 174.5 162 67.9
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 1.1e-41 173.7 149 74.5
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 1.9e-41 172.9 154 69.5
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 1.9e-41 172.9 164 71.3
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 3.3e-41 172.2 154 69.5
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 4.3e-41 171.8 169 68.6
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 5.6e-41 171.4 151 70.9
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 5.6e-41 171.4 195 50.8
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 7.4e-41 171.0 154 70.1
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 9.6e-41 170.6 154 68.8
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 1.6e-40 169.9 142 74.6
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 2.1e-40 169.5 151 71.5
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 2.1e-40 169.5 153 70.6
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 3.7e-40 168.7 202 58.9
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 2.4e-39 166.0 146 69.2
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 4.0e-39 165.2 147 69.4
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 5.3e-39 164.9 162 67.3
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 5.3e-39 164.9 147 69.4
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 5.3e-39 164.9 173 58.4
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 6.9e-39 164.5 162 67.3
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 9.0e-39 164.1 146 69.2
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.2e-38 163.7 118 84.7
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 1.7e-37 159.8 143 72.0
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 8.7e-34 147.5 187 50.3
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 2.8e-32 142.5 111 73.0
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 6.3e-32 141.4 156 53.8
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 3.1e-31 139.0 160 57.5
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 4.1e-31 138.7 118 70.3
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 5.3e-31 138.3 138 64.5
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 9.0e-31 137.5 111 73.0
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 4.5e-30 135.2 103 72.8
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 2.5e-28 129.4 152 62.5
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 9.3e-28 127.5 82 74.4
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 4.6e-27 125.2 142 52.1
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 7.9e-27 124.4 141 58.2
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 5.7e-25 118.2 126 54.8
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 2.2e-21 106.3 170 42.9
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 3.8e-21 105.5 102 57.8
Hund05201 Selenicereus undatus HOM05D007166 ORTHO05D009039 8.2e-16 87.8 95 54.7
Aqoxy5G01769 Aquilegia oxysepala HOM05D007166 ORTHO05D009039 2.6e-14 82.8 94 45.7
Thecc.09G255600 Theobroma cacao HOM05D007166 ORTHO05D009039 2.5e-12 76.3 105 48.6
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 2.7e-11 72.8 60 60.0
MBI09_g08444_MAGBIO Magnolia biondii HOM05D007166 ORTHO05D009039 3.0e-10 69.3 96 41.7


User provided reference genes

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