Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1931 Punica granatum HOM05D004687 ORTHO05D006002 0.0e+00 1123.6 578 100.0
CiPaw.02G034500 Carya illinoinensis HOM05D004687 ORTHO05D006002 1.5e-136 490.7 597 49.6
Eucgr.D02323 Eucalyptus grandis HOM05D004687 ORTHO05D006002 1.2e-133 481.1 587 49.7
Dinv32519 Davidia involucrata HOM05D004687 ORTHO05D006002 2.7e-125 453.4 604 46.7
Lj3g0008911 Lotus japonicus HOM05D004687 ORTHO05D006002 3.5e-125 453.0 589 47.4
CANSAT56G3669 Cannabis sativa HOM05D004687 ORTHO05D006002 1.1e-123 448.0 591 48.7
Atru.chr5.560 Acer truncatum HOM05D004687 ORTHO05D006002 1.9e-123 447.2 597 48.2
Atru.chr5.577 Acer truncatum HOM05D004687 ORTHO05D006002 1.6e-122 444.1 597 48.1
Glyma.16G032000 Glycine max HOM05D004687 ORTHO05D006002 2.1e-122 443.7 590 46.3
TAR374G1208 Trochodendron aralioides HOM05D004687 ORTHO05D006002 4.7e-122 442.6 606 48.2
QL04p055402 Quercus lobata HOM05D004687 ORTHO05D006002 3.4e-120 436.4 699 43.3
Phvul.010G104100 Phaseolus vulgaris HOM05D004687 ORTHO05D006002 1.4e-118 431.0 593 46.9
Thecc.01G352900 Theobroma cacao HOM05D004687 ORTHO05D006002 1.9e-118 430.6 583 46.8
Cfa003875 Carpinus fangiana HOM05D004687 ORTHO05D006002 2.4e-118 430.3 566 48.4
Lj7A508T42 Lonicera japonica HOM05D004687 ORTHO05D006002 1.2e-117 427.9 587 47.4
GSVIVG01026963001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.2e-117 427.9 607 46.1
VMungo0331G0070 Vigna mungo HOM05D004687 ORTHO05D006002 1.0e-116 424.9 583 46.1
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 5.0e-116 422.5 588 43.4
Lalb_Chr10g0096671 Lupinus albus HOM05D004687 ORTHO05D006002 4.3e-115 419.5 587 45.1
arahy.Tifrunner.gnm1.ann1.PSKN5N Arachis hypogaea HOM05D004687 ORTHO05D006002 9.5e-115 418.3 585 43.6
Cpa.g.sc184.31 Carica papaya HOM05D004687 ORTHO05D006002 1.2e-114 417.9 586 46.4
Migut.B01796 Erythranthe guttata HOM05D004687 ORTHO05D006002 1.1e-113 414.8 583 45.8
Sabra14G0065300 Salix brachista HOM05D004687 ORTHO05D006002 6.8e-113 412.1 567 45.7
Nn1g01677 Nelumbo nucifera HOM05D004687 ORTHO05D006002 7.5e-112 408.7 577 45.6
Manes.01G252600 Manihot esculenta HOM05D004687 ORTHO05D006002 1.3e-111 407.9 592 45.3
Psat4g212240 Pisum sativum HOM05D004687 ORTHO05D006002 2.2e-111 407.1 586 44.5
Nitab4.5_0000915g0140 Nicotiana tabacum HOM05D004687 ORTHO05D006002 3.7e-111 406.4 610 43.6
Ca_03498_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 6.4e-111 405.6 582 44.0
Prupe.2G177100 Prunus persica HOM05D004687 ORTHO05D006002 1.9e-110 404.1 588 44.4
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 7.1e-110 402.1 581 44.1
COL.COLO4_12774 Corchorus olitorius HOM05D004687 ORTHO05D006002 2.7e-109 400.2 587 44.8
MSTRG.20861 Avicennia marina HOM05D004687 ORTHO05D006002 6.0e-109 399.1 586 42.8
CSS0026327 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 1.3e-108 397.9 596 43.5
Cc02_g38540 Coffea canephora HOM05D004687 ORTHO05D006002 3.9e-108 396.4 602 42.9
Oeu063679.1 Olea europaea HOM05D004687 ORTHO05D006002 3.9e-108 396.4 598 43.5
ClCG06G003410 Citrullus lanatus HOM05D004687 ORTHO05D006002 5.1e-108 396.0 592 44.6
Sed0003221 Sechium edule HOM05D004687 ORTHO05D006002 3.3e-107 393.3 580 44.5
Gorai.007G103300 Gossypium raimondii HOM05D004687 ORTHO05D006002 3.6e-106 389.8 592 42.4
Solyc01g095090.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 4.7e-106 389.4 592 44.4
Gohir.D11G097000 Gossypium hirsutum HOM05D004687 ORTHO05D006002 6.2e-106 389.0 592 41.9
Sc01g0003240 Simmondsia chinensis HOM05D004687 ORTHO05D006002 8.1e-106 388.7 601 42.9
Duzib138G0011 Durio zibethinus HOM05D004687 ORTHO05D006002 5.2e-105 386.0 589 42.8
TWI14G1112 Tripterygium wilfordii HOM05D004687 ORTHO05D006002 6.8e-105 385.6 596 43.8
Potri.014G089800 Populus trichocarpa HOM05D004687 ORTHO05D006002 9.9e-104 381.7 544 44.9
Peaxi162Scf00020g01410 Petunia axillaris HOM05D004687 ORTHO05D006002 1.7e-103 380.9 593 43.3
FAN10G0227 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.2e-103 380.6 597 42.5
Aqoxy7G00187 Aquilegia oxysepala HOM05D004687 ORTHO05D006002 1.1e-102 378.3 624 41.3
FvH4_7g15320 Fragaria vesca HOM05D004687 ORTHO05D006002 1.1e-102 378.3 597 42.7
FAN06G2065 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.1e-102 378.3 597 42.7
Ciclev10019565m.g Citrus clementina HOM05D004687 ORTHO05D006002 4.1e-102 376.3 592 43.2
FAN06G2774 Fragaria x ananassa HOM05D004687 ORTHO05D006002 7.1e-102 375.6 597 42.5
RcHm_v2.0_Chr1g0357651 Rosa chinensis HOM05D004687 ORTHO05D006002 3.5e-101 373.2 594 42.8
PGSC0003DMG400000194 Solanum tuberosum HOM05D004687 ORTHO05D006002 3.5e-101 373.2 641 41.3
PSO478G3840 Papaver somniferum HOM05D004687 ORTHO05D006002 1.7e-100 370.9 612 40.8
DCAR_006947 Daucus carota HOM05D004687 ORTHO05D006002 2.3e-100 370.5 561 42.4
PSO266G0021 Papaver somniferum HOM05D004687 ORTHO05D006002 1.1e-97 361.7 611 39.8
Hund27243 Selenicereus undatus HOM05D004687 ORTHO05D006002 1.1e-97 361.7 584 41.3
Rhsim07G0010800 Rhododendron simsii HOM05D004687 ORTHO05D006002 1.7e-95 354.4 631 38.4
THA.LOC104817038 Tarenaya hassleriana HOM05D004687 ORTHO05D006002 4.9e-95 352.8 581 41.7
MELO3C021180.2 Cucumis melo HOM05D004687 ORTHO05D006002 6.4e-95 352.4 615 41.1
MD01G1070600 Malus domestica HOM05D004687 ORTHO05D006002 1.1e-94 351.7 589 40.4
MBI04_g26968_MAGBIO Magnolia biondii HOM05D004687 ORTHO05D006002 1.9e-94 350.9 593 41.7
Nitab4.5_0009238g0010 Nicotiana tabacum HOM05D004687 ORTHO05D006002 2.1e-93 347.4 604 41.2
Peaxi162Scf00403g00830 Petunia axillaris HOM05D004687 ORTHO05D006002 8.7e-92 342.0 515 43.5
Lsat_1_v5_gn_7_3881 Lactuca sativa HOM05D004687 ORTHO05D006002 1.6e-90 337.8 587 39.4
SalBow3G3455 Salvia bowleyana HOM05D004687 ORTHO05D006002 2.8e-90 337.0 631 39.5
TPR.G28289 Trifolium pratense HOM05D004687 ORTHO05D006002 1.5e-88 331.3 558 40.7
Aa31LG5G750 Aethionema arabicum HOM05D004687 ORTHO05D006002 3.4e-88 330.1 585 40.2
PGSC0003DMG400033881 Solanum tuberosum HOM05D004687 ORTHO05D006002 1.7e-87 327.8 536 43.1
AT4G01270 Arabidopsis thaliana HOM05D004687 ORTHO05D006002 2.9e-87 327.0 579 38.9
Haze_15561 Corylus avellana HOM05D004687 ORTHO05D006002 2.9e-87 327.0 593 40.6
FAN10G4173 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.2e-86 323.6 597 39.5
Carub.0006s3633 Capsella rubella HOM05D004687 ORTHO05D006002 4.2e-86 323.2 579 39.6
Sopen05g028410 Solanum pennellii HOM05D004687 ORTHO05D006002 9.3e-86 322.0 518 43.1
CSS0036615 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 3.5e-85 320.1 547 40.0
Solyc05g050020.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 7.9e-85 318.9 528 42.4
ECA236G1242 Erigeron canadensis HOM05D004687 ORTHO05D006002 1.0e-84 318.5 580 38.6
Thhalv10029490m.g Eutrema salsugineum HOM05D004687 ORTHO05D006002 1.0e-84 318.5 579 40.1
A03p31950 Brassica napus HOM05D004687 ORTHO05D006002 3.9e-84 316.6 581 39.6
Sp6g00860 Schrenkiella parvula HOM05D004687 ORTHO05D006002 2.5e-83 313.9 588 38.4
BolC3t16169H Brassica oleracea HOM05D004687 ORTHO05D006002 7.4e-83 312.4 580 38.8
BraA03t12367Z Brassica rapa HOM05D004687 ORTHO05D006002 9.6e-83 312.0 580 38.6
Actinidia20159 Actinidia chinensis HOM05D004687 ORTHO05D006002 1.3e-82 311.6 594 39.2
CARHR249040 Cardamine hirsuta HOM05D004687 ORTHO05D006002 6.2e-82 309.3 581 38.4
C03p38970 Brassica napus HOM05D004687 ORTHO05D006002 2.4e-81 307.4 580 38.4
SGA_v2.0_scaffold95G28807 Striga asiatica HOM05D004687 ORTHO05D006002 2.4e-81 307.4 606 36.1
BcaC01g06853 Brassica carinata HOM05D004687 ORTHO05D006002 6.9e-81 305.8 580 38.3
AL6G52120 Arabidopsis lyrata HOM05D004687 ORTHO05D006002 2.0e-80 304.3 581 37.9
BcaB01g02150 Brassica carinata HOM05D004687 ORTHO05D006002 3.8e-79 300.1 581 38.2
CSS0021310 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 6.0e-77 292.7 540 38.3
BraA09t35739Z Brassica rapa HOM05D004687 ORTHO05D006002 1.3e-76 291.6 587 37.5
BcaC04g24137 Brassica carinata HOM05D004687 ORTHO05D006002 1.8e-76 291.2 584 38.2
C09p00700 Brassica napus HOM05D004687 ORTHO05D006002 1.8e-76 291.2 584 38.2
BolC9t53004H Brassica oleracea HOM05D004687 ORTHO05D006002 1.8e-76 291.2 584 38.2
A09p00090 Brassica napus HOM05D004687 ORTHO05D006002 2.3e-76 290.8 589 37.4
unitig_699.g19806 Utricularia gibba HOM05D004687 ORTHO05D006002 3.0e-76 290.4 541 36.4
CSS0041346 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 3.9e-76 290.0 497 39.8
Ah.05g180180 Amaranthus hybridus HOM05D004687 ORTHO05D006002 8.2e-74 282.3 314 50.6
ATR0661G462 Amborella trichopoda HOM05D004687 ORTHO05D006002 2.9e-71 273.9 601 35.6
HanXRQChr04g0120761 Helianthus annuus HOM05D004687 ORTHO05D006002 2.1e-69 267.7 578 35.3
Prupe.2G177000 Prunus persica HOM05D004687 ORTHO05D006002 3.5e-69 266.9 505 37.0
MD01G1070500 Malus domestica HOM05D004687 ORTHO05D006002 5.1e-68 263.1 514 36.2
AUR62004410 Chenopodium quinoa HOM05D004687 ORTHO05D006002 1.1e-67 261.9 590 35.6
CsaV3_6G000900 Cucumis sativus L. HOM05D004687 ORTHO05D006002 1.9e-67 261.2 503 38.6
HanXRQChr06g0170331 Helianthus annuus HOM05D004687 ORTHO05D006002 1.9e-67 261.2 584 34.4
vmacro13232 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 2.2e-66 257.7 333 46.2
SEGI_33633 Sequoiadendron giganteum HOM05D004687 ORTHO05D006002 1.8e-65 254.6 608 32.9
Lalb_Chr17g0339021 Lupinus albus HOM05D004687 ORTHO05D006002 6.9e-65 252.7 223 57.8
BcaB01g02289 Brassica carinata HOM05D004687 ORTHO05D006002 1.0e-63 248.8 587 35.1
FAN01G0098 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.0e-63 248.8 493 39.1
Zm00001eb416420 Zea mays HOM05D004687 ORTHO05D006002 3.8e-63 246.9 620 32.6
Gohir.A11G092200 Gossypium hirsutum HOM05D004687 ORTHO05D006002 2.2e-58 231.1 430 39.3
Os08g0151700 Oryza sativa ssp. japonica HOM05D004687 ORTHO05D006002 3.1e-57 227.3 607 31.6
EL10Ac1g00358 Beta vulgaris HOM05D004687 ORTHO05D006002 1.9e-54 218.0 397 39.3
AUR62022616 Chenopodium quinoa HOM05D004687 ORTHO05D006002 6.1e-53 213.0 501 34.3
RcHm_v2.0_Chr2g0111671 Rosa chinensis HOM05D004687 ORTHO05D006002 1.1e-49 202.2 574 30.8
FAN03G2011 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.5e-48 198.4 411 38.0
FvH4_1g19860 Fragaria vesca HOM05D004687 ORTHO05D006002 2.0e-48 198.0 278 43.9
FAN19G0767 Fragaria x ananassa HOM05D004687 ORTHO05D006002 5.9e-48 196.4 278 43.5
FAN28G2978 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.8e-47 193.7 278 43.2
Nitab4.5_0002262g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 1.9e-46 191.4 313 42.5
FAN26G2006 Fragaria x ananassa HOM05D004687 ORTHO05D006002 9.4e-46 189.1 279 43.0
Pp3c23_12760 Physcomitrium patens HOM05D004687 ORTHO05D006002 4.7e-45 186.8 325 38.5
SMO147G0044 Selaginella moellendorffii HOM05D004687 ORTHO05D006002 2.3e-44 184.5 294 40.1
SGA_v2.0_scaffold95G28804 Striga asiatica HOM05D004687 ORTHO05D006002 2.4e-41 174.5 313 38.0
Nitab4.5_0003779g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 4.2e-38 163.7 488 31.8
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.8e-36 158.3 115 65.2
Potri.002G164000 Populus trichocarpa HOM05D004687 ORTHO05D006002 4.0e-36 157.1 300 37.3
Lalb_Chr17g0339031 Lupinus albus HOM05D004687 ORTHO05D006002 1.7e-34 151.8 353 35.1
CDE11G0743 Ceratophyllum demersum HOM05D002440 ORTHO05D002576 3.5e-32 144.1 447 30.0
QL06p033484 Quercus lobata HOM05D004687 ORTHO05D006002 4.2e-30 137.1 116 55.2
vmacro13233 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 4.7e-29 133.7 149 49.0
CBR_g45680 Chara braunii HOM05D004687 ORTHO05D006002 3.0e-28 131.0 335 30.4
SHI13366 Sapria himalayana HOM05D004687 ORTHO05D006002 3.0e-28 131.0 141 47.5
MD01G1071100 Malus domestica HOM05D004687 ORTHO05D006002 1.2e-27 129.0 95 60.0
SHI13367 Sapria himalayana HOM05D004687 ORTHO05D006002 1.3e-26 125.6 421 30.2
FAN23G1626 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.7e-26 124.0 533 25.9
Sopen01g038880 Solanum pennellii HOM05D004687 ORTHO05D006002 6.3e-26 123.2 315 34.6
Actinidia20138 Actinidia chinensis HOM05D004687 ORTHO05D006002 5.9e-24 116.7 116 52.6
Actinidia10067 Actinidia chinensis HOM05D004687 ORTHO05D006002 6.6e-23 113.2 386 30.1
COL.COLO4_21921 Corchorus olitorius HOM05D004687 ORTHO05D006002 9.8e-19 99.4 80 50.0
Aa31sc194G60 Aethionema arabicum HOM05D004687 ORTHO05D006002 1.3e-18 99.0 146 43.8
SGA_v2.0_scaffold95G28808 Striga asiatica HOM05D005821 ORTHO05D006649 1.1e-17 95.9 100 54.0
PSO541G1518 Papaver somniferum HOM05D004687 ORTHO05D006002 1.8e-17 95.1 77 53.2
ATR0804G028 Amborella trichopoda HOM05D004687 ORTHO05D006002 6.6e-15 86.7 130 44.6
Mapoly0091s0017 Marchantia polymorpha HOM05D004687 ORTHO05D006002 1.2e-13 82.4 295 25.1
Ca_03421_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 8.3e-10 69.7 125 38.4


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