Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1817 Punica granatum HOM05D006241 ORTHO05D007842 5.4e-42 173.7 76 100.0
CiPaw.08G071900 Carya illinoinensis HOM05D006241 ORTHO05D007842 3.9e-32 141.0 69 88.4
Atru.chr13.161 Acer truncatum HOM05D006241 ORTHO05D007842 1.1e-31 139.4 71 83.1
Cpa.g.sc222.6 Carica papaya HOM05D006241 ORTHO05D007842 1.9e-31 138.7 72 84.7
CiPaw.07G140100 Carya illinoinensis HOM05D006241 ORTHO05D007842 2.5e-31 138.3 68 86.8
Ca_19011_v3 Cicer arietinum L. HOM05D006241 ORTHO05D007842 2.5e-31 138.3 70 84.3
Nn5g30908 Nelumbo nucifera HOM05D006241 ORTHO05D007842 2.5e-31 138.3 76 80.3
Prupe.1G355800 Prunus persica HOM05D006241 ORTHO05D007842 4.3e-31 137.5 65 89.2
QL02p013848 Quercus lobata HOM05D006241 ORTHO05D007842 4.3e-31 137.5 67 83.6
Cc10_g00830 Coffea canephora HOM05D006241 ORTHO05D007842 7.3e-31 136.7 71 83.1
FvH4_2g37630 Fragaria vesca HOM05D006241 ORTHO05D007842 9.5e-31 136.3 76 82.9
Gohir.A01G107600 Gossypium hirsutum HOM05D006241 ORTHO05D007842 9.5e-31 136.3 69 84.1
arahy.Tifrunner.gnm1.ann1.1F1YZI Arachis hypogaea HOM05D006241 ORTHO05D007842 1.2e-30 136.0 68 83.8
arahy.Tifrunner.gnm1.ann1.1NSU2H Arachis hypogaea HOM05D006241 ORTHO05D007842 1.2e-30 136.0 68 83.8
arahy.Tifrunner.gnm1.ann1.4R2MNP Arachis hypogaea HOM05D006241 ORTHO05D007842 1.2e-30 136.0 68 83.8
arahy.Tifrunner.gnm1.ann1.L8CN1K Arachis hypogaea HOM05D006241 ORTHO05D007842 1.2e-30 136.0 68 83.8
THA.LOC104811457 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 1.2e-30 136.0 68 83.8
CSS0008517 Camellia sinensis var. sinensis HOM05D006241 ORTHO05D007842 1.6e-30 135.6 77 80.5
COL.COLO4_21601 Corchorus olitorius HOM05D006241 ORTHO05D007842 2.8e-30 134.8 71 83.1
Glyma.11G099500 Glycine max HOM05D006241 ORTHO05D007842 3.6e-30 134.4 68 83.8
Psat7g177480 Pisum sativum HOM05D006241 ORTHO05D007842 3.6e-30 134.4 71 83.1
THA.LOC109116669 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 3.6e-30 134.4 68 80.9
Actinidia17033 Actinidia chinensis HOM05D006241 ORTHO05D007842 6.2e-30 133.7 71 80.3
Gohir.D01G094000 Gossypium hirsutum HOM05D006241 ORTHO05D007842 6.2e-30 133.7 69 82.6
Gorai.002G119300 Gossypium raimondii HOM05D006241 ORTHO05D007842 6.2e-30 133.7 69 82.6
Duzib093G0667 Durio zibethinus HOM05D006241 ORTHO05D007842 8.0e-30 133.3 69 82.6
Duzib116G0823 Durio zibethinus HOM05D006241 ORTHO05D007842 8.0e-30 133.3 69 82.6
CDE05G1511 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 1.1e-29 132.9 75 77.3
MELO3C017010.2 Cucumis melo HOM05D006241 ORTHO05D007842 1.1e-29 132.9 76 80.3
CsaV3_4G037120 Cucumis sativus L. HOM05D006241 ORTHO05D007842 1.1e-29 132.9 72 83.3
Glyma.12G025500 Glycine max HOM05D006241 ORTHO05D007842 1.1e-29 132.9 68 82.4
Lj3g0010530 Lotus japonicus HOM05D006241 ORTHO05D007842 1.1e-29 132.9 65 89.2
Potri.005G248600 Populus trichocarpa HOM05D006241 ORTHO05D007842 1.1e-29 132.9 66 84.8
AL2G36270 Arabidopsis lyrata HOM05D006241 ORTHO05D007842 1.4e-29 132.5 71 80.3
AT1G76200 Arabidopsis thaliana HOM05D006241 ORTHO05D007842 1.4e-29 132.5 71 80.3
CAN.G311.105 Capsicum annuum HOM05D006241 ORTHO05D007842 1.8e-29 132.1 67 82.1
Thecc.08G056300 Theobroma cacao HOM05D006241 ORTHO05D007842 1.8e-29 132.1 73 83.6
Cfa014051 Carpinus fangiana HOM05D006241 ORTHO05D007842 2.3e-29 131.7 63 88.9
FAN15G0812 Fragaria x ananassa HOM05D006241 ORTHO05D007842 2.3e-29 131.7 69 81.2
Gorai.009G189100 Gossypium raimondii HOM05D006241 ORTHO05D007842 2.3e-29 131.7 69 81.2
Sabra05G0192000 Salix brachista HOM05D006241 ORTHO05D007842 2.3e-29 131.7 66 84.8
TWI12G0416 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 2.3e-29 131.7 65 83.1
Aa31LG4G6300 Aethionema arabicum HOM05D006241 ORTHO05D007842 3.1e-29 131.3 68 82.4
Manes.05G136000 Manihot esculenta HOM05D006241 ORTHO05D007842 4.0e-29 131.0 63 87.3
Manes.18G006720 Manihot esculenta HOM05D006241 ORTHO05D007842 4.0e-29 131.0 63 85.7
Actinidia15484 Actinidia chinensis HOM05D006241 ORTHO05D007842 6.8e-29 130.2 71 77.5
Eucgr.F01733 Eucalyptus grandis HOM05D006241 ORTHO05D007842 6.8e-29 130.2 63 85.7
TWI56G0163 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 6.8e-29 130.2 65 81.5
TAR376G1175 Trochodendron aralioides HOM05D006241 ORTHO05D007842 6.8e-29 130.2 63 85.7
CDE05G0950 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 8.9e-29 129.8 69 76.8
Gohir.D05G183800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 8.9e-29 129.8 69 79.7
Dinv39579 Davidia involucrata HOM05D006241 ORTHO05D007842 1.2e-28 129.4 64 84.4
PGSC0003DMG400009898 Solanum tuberosum HOM05D006241 ORTHO05D007842 1.5e-28 129.0 67 80.6
TAR381G1678 Trochodendron aralioides HOM05D006241 ORTHO05D007842 1.5e-28 129.0 78 78.2
CARHR069760 Cardamine hirsuta HOM05D006241 ORTHO05D007842 2.0e-28 128.6 68 77.9
Gohir.A05G180800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 2.0e-28 128.6 69 79.7
Potri.002G012700 Populus trichocarpa HOM05D006241 ORTHO05D007842 2.0e-28 128.6 66 81.8
Lalb_Chr17g0337811 Lupinus albus HOM05D006241 ORTHO05D007842 2.6e-28 128.3 71 76.1
SGA_v2.0_scaffold25G11191 Striga asiatica HOM05D006241 ORTHO05D007842 2.6e-28 128.3 62 83.9
Aqoxy6G01804 Aquilegia oxysepala HOM05D006241 ORTHO05D007842 3.4e-28 127.9 63 84.1
Phvul.011G027800 Phaseolus vulgaris HOM05D006241 ORTHO05D007842 3.4e-28 127.9 63 79.4
CANSAT54G0965 Cannabis sativa HOM05D006241 ORTHO05D007842 4.4e-28 127.5 68 80.9
Duzib041G0756 Durio zibethinus HOM05D006241 ORTHO05D007842 5.8e-28 127.1 69 79.7
Migut.N03197 Erythranthe guttata HOM05D006241 ORTHO05D007842 5.8e-28 127.1 66 83.3
Dinv31923 Davidia involucrata HOM05D006241 ORTHO05D007842 9.8e-28 126.3 63 82.5
Carub.0002s2310 Capsella rubella HOM05D006241 ORTHO05D007842 2.2e-27 125.2 71 76.1
Sp5g31350 Schrenkiella parvula HOM05D006241 ORTHO05D007842 2.2e-27 125.2 71 76.1
Ciclev10010113m.g Citrus clementina HOM05D006241 ORTHO05D007842 3.7e-27 124.4 71 76.1
BcaC08g47119 Brassica carinata HOM05D006241 ORTHO05D007842 8.3e-27 123.2 66 75.8
BcaC08g47281 Brassica carinata HOM05D006241 ORTHO05D007842 8.3e-27 123.2 66 75.8
A07p41770 Brassica napus HOM05D006241 ORTHO05D007842 8.3e-27 123.2 66 75.8
C06p50150 Brassica napus HOM05D006241 ORTHO05D007842 8.3e-27 123.2 66 75.8
BolC6t40055H Brassica oleracea HOM05D006241 ORTHO05D007842 8.3e-27 123.2 66 75.8
A07p28590 Brassica napus HOM05D006241 ORTHO05D007842 1.9e-26 122.1 71 74.6
BcaC08g47115 Brassica carinata HOM05D006241 ORTHO05D007842 2.4e-26 121.7 71 73.2
Thhalv10019410m.g Eutrema salsugineum HOM05D006241 ORTHO05D007842 2.4e-26 121.7 68 77.9
PSO357G0248 Papaver somniferum HOM05D006241 ORTHO05D007842 3.2e-26 121.3 81 67.9
Lsat_1_v5_gn_8_133721 Lactuca sativa HOM05D006241 ORTHO05D007842 4.1e-26 120.9 70 75.7
BcaB02g07055 Brassica carinata HOM05D006241 ORTHO05D007842 5.4e-26 120.6 71 73.2
PSO170G5266 Papaver somniferum HOM05D006241 ORTHO05D007842 5.4e-26 120.6 81 67.9
BraA07t31707Z Brassica rapa HOM05D006241 ORTHO05D007842 9.2e-26 119.8 66 74.2
Lalb_Chr10g0094931 Lupinus albus HOM05D006241 ORTHO05D007842 1.6e-25 119.0 70 74.3
ECA248G1104 Erigeron canadensis HOM05D006241 ORTHO05D007842 7.8e-25 116.7 70 74.3
ATR0661G361 Amborella trichopoda HOM05D006241 ORTHO05D007842 1.0e-24 116.3 71 71.8
BcaB05g24973 Brassica carinata HOM05D006241 ORTHO05D007842 1.3e-24 115.9 60 75.0
BraA07t30500Z Brassica rapa HOM05D006241 ORTHO05D007842 2.3e-24 115.2 71 70.4
BraA02t07081Z Brassica rapa HOM05D006241 ORTHO05D007842 8.6e-24 113.2 65 72.3
GSVIVG01008691001 Vitis vinifera HOM05D006241 ORTHO05D007842 1.1e-23 112.8 54 83.3
BcaC08g45539 Brassica carinata HOM05D006241 ORTHO05D007842 1.9e-23 112.1 66 69.7
C06p32170 Brassica napus HOM05D006241 ORTHO05D007842 1.9e-23 112.1 66 69.7
BolC6t38340H Brassica oleracea HOM05D006241 ORTHO05D007842 1.9e-23 112.1 66 69.7
Os05g0122900 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 5.6e-23 110.5 63 74.6
AagrBONN_evm.TU.Sc2ySwM_117.850 Anthoceros agrestis HOM05D006241 ORTHO05D007842 1.1e-21 106.3 79 57.0
Nitab4.5_0000588g0230 Nicotiana tabacum HOM05D006241 ORTHO05D007842 1.4e-21 105.9 53 84.9
Zm00001eb294120 Zea mays HOM05D006241 ORTHO05D007842 1.4e-21 105.9 63 71.4
VMungo1127G1075 Vigna mungo HOM05D006241 ORTHO05D007842 2.3e-21 105.1 61 75.4
MD08G1003800 Malus domestica HOM05D006241 ORTHO05D007842 8.9e-21 103.2 50 84.0
FAN20G1861 Fragaria x ananassa HOM05D006241 ORTHO05D007842 1.2e-20 102.8 49 87.8
RcHm_v2.0_Chr6g0304101 Rosa chinensis HOM05D006241 ORTHO05D007842 1.2e-20 102.8 49 85.7
Zm00001eb356460 Zea mays HOM05D006241 ORTHO05D007842 1.5e-20 102.4 63 69.8
MD15G1003400 Malus domestica HOM05D006241 ORTHO05D007842 4.4e-20 100.9 49 83.7
Pp3c18_1920 Physcomitrium patens HOM05D006241 ORTHO05D007842 5.8e-20 100.5 75 58.7
Pp3c21_21340 Physcomitrium patens HOM05D006241 ORTHO05D007842 7.5e-20 100.1 74 58.1
HanXRQChr17g0555751 Helianthus annuus HOM05D006241 ORTHO05D007842 4.9e-19 97.4 52 78.8
HanXRQChr17g0554651 Helianthus annuus HOM05D006241 ORTHO05D007842 8.3e-19 96.7 70 64.3
HPP92_021050 Vanilla planifolia HOM05D006241 ORTHO05D007842 8.3e-19 96.7 53 77.4
Hund08526 Selenicereus undatus HOM05D006241 ORTHO05D007842 1.1e-18 96.3 54 79.6
Os06g0725400 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 5.4e-18 94.0 63 68.3
MBI19_g43741_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 1.6e-17 92.4 48 77.1
Mapoly0108s0047 Marchantia polymorpha HOM05D006241 ORTHO05D007842 1.6e-17 92.4 66 60.6
SalBow6G4847 Salvia bowleyana HOM05D006241 ORTHO05D007842 7.8e-17 90.1 52 76.9
Mapoly0103s0030 Marchantia polymorpha HOM05D006241 ORTHO05D007842 1.0e-16 89.7 72 50.0
BolC2t09367H Brassica oleracea HOM05D006241 ORTHO05D007842 5.6e-15 84.0 52 69.2
ClCG05G015200 Citrullus lanatus HOM05D006241 ORTHO05D007842 1.7e-11 72.4 35 82.9
Nn6g31777 Nelumbo nucifera HOM05D006241 ORTHO05D007842 1.7e-11 72.4 41 75.6
Sed0002381 Sechium edule HOM05D006241 ORTHO05D007842 3.8e-11 71.2 35 80.0
AUR62015196 Chenopodium quinoa HOM05D006241 ORTHO05D007842 4.9e-11 70.9 37 81.1
AUR62017658 Chenopodium quinoa HOM05D006241 ORTHO05D007842 4.9e-11 70.9 37 81.1
Ah.01g013010 Amaranthus hybridus HOM05D006241 ORTHO05D007842 8.4e-11 70.1 37 78.4
DCAR_013903 Daucus carota HOM05D006241 ORTHO05D007842 3.2e-10 68.2 54 63.0
Sabra07G0051400 Salix brachista HOM05D006241 ORTHO05D349851 3.2e-10 68.2 48 60.4
Medtr4g075160 Medicago truncatula HOM05D006241 ORTHO05D007842 7.1e-10 67.0 38 76.3
Ah.01g001690 Amaranthus hybridus HOM05D006241 ORTHO05D007842 1.6e-09 65.9 37 73.0
vmacro04395 Vaccinium macrocarpon HOM05D006241 ORTHO05D007842 2.1e-09 65.5 36 77.8
unitig_746.g26818 Utricularia gibba HOM05D003604 ORTHO05D000209 7.8e-09 63.5 31 77.4
MBI19_g35281_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 2.3e-08 62.0 33 69.7
DCAR_016755 Daucus carota HOM05D006241 ORTHO05D007842 1.5e-07 59.3 34 73.5


User provided reference genes

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