Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1810 Punica granatum HOM05D006906 ORTHO05D008578 1.2e-51 206.5 118 100.0
Ah.05g166860 Amaranthus hybridus HOM05D006906 ORTHO05D008578 2.9e-26 122.1 94 64.9
Hma1.2p1_1068F.1_g254010 Hydrangea macrophylla HOM05D006906 ORTHO05D008578 7.1e-25 117.5 98 66.3
Actinidia19594 Actinidia chinensis HOM05D006906 ORTHO05D008578 9.3e-25 117.1 103 63.1
CSS0004987 Camellia sinensis var. sinensis HOM05D006906 ORTHO05D008578 3.5e-24 115.2 93 69.9
Dinv01221 Davidia involucrata HOM05D006906 ORTHO05D008578 7.8e-24 114.0 90 68.9
Rhsim07G0215600 Rhododendron simsii HOM05D006906 ORTHO05D008578 1.3e-23 113.2 97 61.9
Sc26g0004280 Simmondsia chinensis HOM05D006906 ORTHO05D008578 1.7e-23 112.8 92 62.0
ClCG11G014950 Citrullus lanatus HOM05D006906 ORTHO05D008578 2.3e-23 112.5 89 66.3
QL12p040639 Quercus lobata HOM05D006906 ORTHO05D008578 3.0e-23 112.1 125 52.8
TWI56G0746 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 3.0e-23 112.1 95 62.1
TAR628G1359 Trochodendron aralioides HOM05D006906 ORTHO05D008578 3.9e-23 111.7 98 58.2
Sed0015154 Sechium edule HOM05D006906 ORTHO05D008578 8.7e-23 110.5 89 65.2
SGA_v2.0_scaffold152G36871 Striga asiatica HOM05D006906 ORTHO05D008578 1.9e-22 109.4 95 61.1
MELO3C003483.2 Cucumis melo HOM05D006906 ORTHO05D008578 2.5e-22 109.0 89 65.2
MSTRG.17420 Avicennia marina HOM05D006906 ORTHO05D008578 3.3e-22 108.6 98 62.2
AUR62034964 Chenopodium quinoa HOM05D006906 ORTHO05D008578 3.3e-22 108.6 92 63.0
vmacro04612 Vaccinium macrocarpon HOM05D006906 ORTHO05D008578 3.3e-22 108.6 102 58.8
Nitab4.5_0002415g0040 Nicotiana tabacum HOM05D006906 ORTHO05D008578 5.6e-22 107.8 101 61.4
AUR62035774 Chenopodium quinoa HOM05D006906 ORTHO05D008578 7.3e-22 107.5 92 57.6
CiPaw.15G153800 Carya illinoinensis HOM05D006906 ORTHO05D008578 1.6e-21 106.3 93 63.4
Duzib116G0588 Durio zibethinus HOM05D006906 ORTHO05D008578 1.6e-21 106.3 71 70.4
Duzib116G0218 Durio zibethinus HOM05D006906 ORTHO05D008578 2.1e-21 105.9 71 70.4
Eucgr.F00111 Eucalyptus grandis HOM05D006906 ORTHO05D008578 2.1e-21 105.9 91 62.6
Manes.18G052450 Manihot esculenta HOM05D006906 ORTHO05D008578 6.2e-21 104.4 123 48.0
PGSC0003DMG400004936 Solanum tuberosum HOM05D006906 ORTHO05D008578 8.1e-21 104.0 104 62.5
Aqoxy6G01513 Aquilegia oxysepala HOM05D006906 ORTHO05D008578 1.1e-20 103.6 96 54.2
EL10Ac1g02326 Beta vulgaris HOM05D006906 ORTHO05D008578 1.1e-20 103.6 97 58.8
CAN.G416.50 Capsicum annuum HOM05D006906 ORTHO05D008578 1.1e-20 103.6 90 61.1
Solyc04g077130.1 Solanum lycopersicum HOM05D006906 ORTHO05D008578 1.1e-20 103.6 104 63.5
THA.LOC104806946 Tarenaya hassleriana HOM05D006906 ORTHO05D008578 1.1e-20 103.6 98 61.2
Cfa020715 Carpinus fangiana HOM05D006906 ORTHO05D008578 1.4e-20 103.2 91 64.8
Haze_19024 Corylus avellana HOM05D006906 ORTHO05D008578 1.4e-20 103.2 95 60.0
DCAR_012832 Daucus carota HOM05D006906 ORTHO05D008578 2.4e-20 102.4 88 63.6
Sabra02G0088700 Salix brachista HOM05D006906 ORTHO05D008578 3.1e-20 102.1 102 55.9
Potri.002G112500 Populus trichocarpa HOM05D006906 ORTHO05D008578 4.0e-20 101.7 95 58.9
Cpa.g.sc160.12 Carica papaya HOM05D006906 ORTHO05D008578 5.3e-20 101.3 95 58.9
MD08G1211600 Malus domestica HOM05D006906 ORTHO05D008578 6.9e-20 100.9 105 58.1
Sopen04g030750 Solanum pennellii HOM05D006906 ORTHO05D008578 6.9e-20 100.9 103 59.2
Gohir.A05G213900 Gossypium hirsutum HOM05D006906 ORTHO05D008578 1.2e-19 100.1 64 75.0
CANSAT01G2303 Cannabis sativa HOM05D006906 ORTHO05D008578 1.5e-19 99.8 99 55.6
Prupe.1G543500 Prunus persica HOM05D006906 ORTHO05D008578 2.0e-19 99.4 105 52.4
BcaC03g13555 Brassica carinata HOM05D006906 ORTHO05D008578 2.6e-19 99.0 97 55.7
A10p21600 Brassica napus HOM05D006906 ORTHO05D008578 2.6e-19 99.0 93 60.2
BolC2t06848H Brassica oleracea HOM05D006906 ORTHO05D008578 7.6e-19 97.4 99 56.6
Ciclev10002778m.g Citrus clementina HOM05D006906 ORTHO05D008578 7.6e-19 97.4 117 50.4
MD15G1394500 Malus domestica HOM05D006906 ORTHO05D008578 7.6e-19 97.4 105 56.2
BcaC04g18752 Brassica carinata HOM05D006906 ORTHO05D008578 1.3e-18 96.7 100 58.0
BolC9t58765H Brassica oleracea HOM05D006906 ORTHO05D008578 1.3e-18 96.7 100 58.0
Gorai.009G224100 Gossypium raimondii HOM05D006906 ORTHO05D008578 1.3e-18 96.7 64 73.4
Thhalv10015071m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 1.7e-18 96.3 97 54.6
TWI12G0785 Tripterygium wilfordii HOM05D006906 ORTHO05D008578 1.7e-18 96.3 97 56.7
A02p04550 Brassica napus HOM05D006906 ORTHO05D008578 2.2e-18 95.9 95 60.0
C09p59250 Brassica napus HOM05D006906 ORTHO05D008578 2.2e-18 95.9 98 56.1
BraA02t05416Z Brassica rapa HOM05D006906 ORTHO05D008578 2.2e-18 95.9 93 59.1
BraA10t44222Z Brassica rapa HOM05D006906 ORTHO05D008578 2.2e-18 95.9 95 55.8
Duzib093G2206 Durio zibethinus HOM05D006906 ORTHO05D008578 2.2e-18 95.9 92 55.4
BcaB08g36735 Brassica carinata HOM05D006906 ORTHO05D008578 2.9e-18 95.5 98 57.1
Nitab4.5_0001614g0100 Nicotiana tabacum HOM05D006906 ORTHO05D008578 3.8e-18 95.1 82 63.4
CDE01G0046 Ceratophyllum demersum HOM05D006906 ORTHO05D008578 4.9e-18 94.7 60 76.7
Gohir.D05G217300 Gossypium hirsutum HOM05D006906 ORTHO05D008578 4.9e-18 94.7 64 71.9
Sp6g26380 Schrenkiella parvula HOM05D006906 ORTHO05D008578 4.9e-18 94.7 105 57.1
Thecc.08G080900 Theobroma cacao HOM05D006906 ORTHO05D008578 4.9e-18 94.7 97 54.6
C03p09940 Brassica napus HOM05D006906 ORTHO05D008578 6.4e-18 94.4 100 58.0
COL.COLO4_35364 Corchorus olitorius HOM05D006906 ORTHO05D008578 8.4e-18 94.0 64 75.0
Phvul.009G113500 Phaseolus vulgaris HOM05D006906 ORTHO05D008578 1.1e-17 93.6 85 57.6
AT5G17870 Arabidopsis thaliana HOM05D006906 ORTHO05D008578 1.4e-17 93.2 97 54.6
BcaB01g05160 Brassica carinata HOM05D006906 ORTHO05D008578 1.4e-17 93.2 101 56.4
BolC3t13482H Brassica oleracea HOM05D006906 ORTHO05D008578 1.4e-17 93.2 101 56.4
BraA03t10177Z Brassica rapa HOM05D006906 ORTHO05D008578 1.4e-17 93.2 101 56.4
Carub.0006s1610 Capsella rubella HOM05D006906 ORTHO05D008578 1.4e-17 93.2 95 55.8
Aa31LG11G11710 Aethionema arabicum HOM05D006906 ORTHO05D008578 2.4e-17 92.4 86 60.5
BcaB01g04920 Brassica carinata HOM05D006906 ORTHO05D008578 2.4e-17 92.4 97 54.6
Peaxi162Scf00628g00053 Petunia axillaris HOM05D006906 ORTHO05D008578 2.4e-17 92.4 88 59.1
unitig_21.g20623 Utricularia gibba HOM05D006906 ORTHO05D008578 2.4e-17 92.4 100 59.0
AL6G28970 Arabidopsis lyrata HOM05D006906 ORTHO05D008578 3.2e-17 92.0 101 55.4
Os11g0550800 Oryza sativa ssp. japonica HOM05D006906 ORTHO05D008578 3.2e-17 92.0 79 59.5
SalBow2G0068 Salvia bowleyana HOM05D006906 ORTHO05D008578 5.4e-17 91.3 88 60.2
HanXRQChr16g0510751 Helianthus annuus HOM05D006906 ORTHO05D008578 7.1e-17 90.9 98 55.1
HanXRQChr16g0510761 Helianthus annuus HOM05D006906 ORTHO05D008578 7.1e-17 90.9 98 55.1
ECA246G4410 Erigeron canadensis HOM05D006906 ORTHO05D008578 9.3e-17 90.5 105 52.4
CARHR195300 Cardamine hirsuta HOM05D006906 ORTHO05D008578 1.2e-16 90.1 105 53.3
Prupe.3G080900 Prunus persica HOM05D006906 ORTHO05D008578 1.6e-16 89.7 64 65.6
RcHm_v2.0_Chr7g0232161 Rosa chinensis HOM05D006906 ORTHO05D008578 2.7e-16 89.0 105 48.6
FvH4_5g33440 Fragaria vesca HOM05D006906 ORTHO05D008578 4.6e-16 88.2 104 49.0
FAN18G0347 Fragaria x ananassa HOM05D006906 ORTHO05D008578 4.6e-16 88.2 104 49.0
Atru.chr13.910 Acer truncatum HOM05D006906 ORTHO05D008578 6.0e-16 87.8 94 51.1
Lsat_1_v5_gn_6_108161 Lactuca sativa HOM05D006906 ORTHO05D008578 6.0e-16 87.8 98 53.1
MBI16_g41120_MAGBIO Magnolia biondii HOM05D006906 ORTHO05D008578 1.0e-15 87.0 90 55.6
PSO541G5790 Papaver somniferum HOM05D006906 ORTHO05D008578 1.0e-15 87.0 51 74.5
ATR0767G231 Amborella trichopoda HOM05D006906 ORTHO05D008578 1.3e-15 86.7 51 72.5
Glyma.06G089700 Glycine max HOM05D006906 ORTHO05D008578 3.0e-15 85.5 96 55.2
FAN08G0950 Fragaria x ananassa HOM05D006906 ORTHO05D008578 5.1e-15 84.7 106 50.0
Migut.N02816 Erythranthe guttata HOM05D006906 ORTHO05D008578 6.7e-15 84.3 83 63.9
Psat1g221800 Pisum sativum HOM05D006906 ORTHO05D008578 1.9e-14 82.8 85 56.5
PSO675G4379 Papaver somniferum HOM05D006906 ORTHO05D008578 2.5e-14 82.4 96 49.0
TPR.G12407 Trifolium pratense HOM05D006906 ORTHO05D008578 9.6e-14 80.5 100 50.0
Thhalv10009816m.g Eutrema salsugineum HOM05D006906 ORTHO05D008578 2.8e-13 79.0 62 66.1
HPP92_027718 Vanilla planifolia HOM05D006906 ORTHO05D008578 2.8e-13 79.0 78 57.7
HPP92_027715 Vanilla planifolia HOM05D006906 ORTHO05D008578 3.7e-13 78.6 60 66.7
Nn5g30714 Nelumbo nucifera HOM05D006906 ORTHO05D008578 6.2e-13 77.8 98 49.0
BcaC04g18751 Brassica carinata HOM05D006906 ORTHO05D008578 4.0e-12 75.1 95 53.7
C09p59230 Brassica napus HOM05D006906 ORTHO05D008578 4.0e-12 75.1 95 53.7
Medtr3g110640 Medicago truncatula HOM05D006906 ORTHO05D008578 5.3e-12 74.7 85 52.9
BolC9t58763H Brassica oleracea HOM05D006906 ORTHO05D008578 5.8e-11 71.2 101 50.5
Prupe.8G111300 Prunus persica HOM05D006906 ORTHO05D008578 9.9e-11 70.5 66 56.1
Manes.05G185700 Manihot esculenta HOM05D006906 ORTHO05D008578 2.2e-10 69.3 89 46.1
Mapoly0090s0093 Marchantia polymorpha HOM05D006906 ORTHO05D008578 2.1e-08 62.8 47 63.8
CBR_g48804 Chara braunii HOM05D006906 ORTHO05D008578 2.3e-07 59.3 71 43.7
SMO367G0828 Selaginella moellendorffii HOM05D006906 ORTHO05D008578 1.5e-06 56.6 48 64.6
SEGI_12109 Sequoiadendron giganteum HOM05D006906 ORTHO05D008578 1.5e-06 56.6 44 65.9


User provided reference genes

Program Settings