Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1697 Punica granatum HOM05D004614 ORTHO05D005339 3.4e-67 258.5 156 100.0
Peaxi162Scf00893g00434 Petunia axillaris HOM05D004614 ORTHO05D005339 1.2e-11 73.9 69 92.8
Oeu056211.1 Olea europaea HOM05D004614 ORTHO05D005339 2.0e-11 73.2 70 92.9
MD07G1011800 Malus domestica HOM05D004614 ORTHO05D005339 1.7e-10 70.1 67 94.0
ClCG08G009540 Citrullus lanatus HOM05D004614 ORTHO05D005339 2.2e-10 69.7 67 79.1
MELO3C026543.2 Cucumis melo HOM05D004614 ORTHO05D005339 2.2e-10 69.7 67 79.1
Atru.chr13.150 Acer truncatum HOM05D004614 ORTHO05D005339 5.0e-10 68.6 67 79.1
Gohir.D05G182900 Gossypium hirsutum HOM05D004614 ORTHO05D005339 5.0e-10 68.6 67 77.6
AUR62036884 Chenopodium quinoa HOM05D004614 ORTHO05D005339 8.5e-10 67.8 67 61.2
AUR62043351 Chenopodium quinoa HOM05D004614 ORTHO05D005339 8.5e-10 67.8 67 61.2
Rhsim07G0254700 Rhododendron simsii HOM05D004614 ORTHO05D005339 1.1e-09 67.4 67 77.6
TAR376G0430 Trochodendron aralioides HOM05D004614 ORTHO05D005339 1.1e-09 67.4 70 75.7
Lj1g0005022 Lotus japonicus HOM05D004614 ORTHO05D005339 1.9e-09 66.6 67 76.1
Dinv31932 Davidia involucrata HOM05D004614 ORTHO05D005339 2.5e-09 66.2 67 77.6
Migut.C00954 Erythranthe guttata HOM05D004614 ORTHO05D005339 2.5e-09 66.2 70 75.7
Lj4A12T77 Lonicera japonica HOM05D004614 ORTHO05D005339 2.5e-09 66.2 67 91.0
Aa31LG8G13830 Aethionema arabicum HOM05D004614 ORTHO05D005339 5.5e-09 65.1 67 76.1
Actinidia29786 Actinidia chinensis HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 79.1
CSS0048285 Camellia sinensis var. sinensis HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 79.1
CANSAT25G1550 Cannabis sativa HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 79.1
CAN.G311.111 Capsicum annuum HOM05D004614 ORTHO05D005339 1.2e-08 63.9 70 81.4
Cfa014064 Carpinus fangiana HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 76.1
Ciclev10001231m.g Citrus clementina HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 79.1
Cc10_g00730 Coffea canephora HOM05D004614 ORTHO05D005339 1.2e-08 63.9 70 77.1
DCAR_016768 Daucus carota HOM05D004614 ORTHO05D005339 1.2e-08 63.9 70 77.1
ECA232G3530 Erigeron canadensis HOM05D004614 ORTHO05D005339 1.2e-08 63.9 70 77.1
Eucgr.F03550 Eucalyptus grandis HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 79.1
MD08G1002900 Malus domestica HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 79.1
MD15G1002600 Malus domestica HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 79.1
Manes.05G134900 Manihot esculenta HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 79.1
Manes.18G005900 Manihot esculenta HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 82.1
Nn6g31744 Nelumbo nucifera HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 79.1
Prupe.1G354900 Prunus persica HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 79.1
PGR031G0851 Punica granatum HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 79.1
Rhsim06G0008000 Rhododendron simsii HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 77.6
Hund01763 Selenicereus undatus HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 79.1
THA.LOC104813167 Tarenaya hassleriana HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 77.6
TWI56G0787 Tripterygium wilfordii HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 76.1
TAR625G0334 Trochodendron aralioides HOM05D004614 ORTHO05D005339 1.2e-08 63.9 67 79.1
CiPaw.08G072400 Carya illinoinensis HOM05D004614 ORTHO05D005339 1.6e-08 63.5 67 77.6
Dinv25909 Davidia involucrata HOM05D004614 ORTHO05D005339 1.6e-08 63.5 67 77.6
Lsat_1_v5_gn_9_45021 Lactuca sativa HOM05D004614 ORTHO05D005339 1.6e-08 63.5 70 74.3
Potri.002G011300 Populus trichocarpa HOM05D004614 ORTHO05D005339 1.6e-08 63.5 67 76.1
Solyc04g082290.4 Solanum lycopersicum HOM05D004614 ORTHO05D005339 1.6e-08 63.5 70 75.7
Sopen04g035910 Solanum pennellii HOM05D004614 ORTHO05D005339 1.6e-08 63.5 70 75.7
PGSC0003DMG400009975 Solanum tuberosum HOM05D004614 ORTHO05D005339 1.6e-08 63.5 70 75.7
TWI36G0356 Tripterygium wilfordii HOM05D004614 ORTHO05D005339 1.6e-08 63.5 67 77.6
unitig_82.g27116 Utricularia gibba HOM05D004614 ORTHO05D005339 1.6e-08 63.5 70 70.0
Hma1.2p1_0507F.1_g168400 Hydrangea macrophylla HOM05D004614 ORTHO05D005339 2.1e-08 63.2 67 77.6
AL1G51310 Arabidopsis lyrata HOM05D004614 ORTHO05D005339 2.7e-08 62.8 67 74.6
AT1G42430 Arabidopsis thaliana HOM05D004614 ORTHO05D005339 2.7e-08 62.8 67 74.6
BcaB04g17805 Brassica carinata HOM05D004614 ORTHO05D005339 2.7e-08 62.8 67 74.6
BcaC07g37479 Brassica carinata HOM05D004614 ORTHO05D005339 2.7e-08 62.8 67 74.6
A08p07800 Brassica napus HOM05D004614 ORTHO05D005339 2.7e-08 62.8 67 74.6
C08p09450 Brassica napus HOM05D004614 ORTHO05D005339 2.7e-08 62.8 67 74.6
BolC8t47801H Brassica oleracea HOM05D004614 ORTHO05D005339 2.7e-08 62.8 67 74.6
BraA08t32800Z Brassica rapa HOM05D004614 ORTHO05D005339 2.7e-08 62.8 67 74.6
Carub.0001s3422 Capsella rubella HOM05D004614 ORTHO05D005339 2.7e-08 62.8 67 74.6
CsaV3_6G031620 Cucumis sativus L. HOM05D004614 ORTHO05D005339 2.7e-08 62.8 67 77.6
Sp1g32010 Schrenkiella parvula HOM05D004614 ORTHO05D005339 2.7e-08 62.8 67 74.6
Sed0024410 Sechium edule HOM05D004614 ORTHO05D005339 2.7e-08 62.8 67 74.6
Sc15g0004500 Simmondsia chinensis HOM05D004614 ORTHO05D005339 2.7e-08 62.8 67 74.6
Thecc.08G058000 Theobroma cacao HOM05D004614 ORTHO05D005339 2.7e-08 62.8 67 76.1
Ah.00g000370 Amaranthus hybridus HOM05D004614 ORTHO05D005339 3.6e-08 62.4 67 77.6
CDE02G2145 Ceratophyllum demersum HOM05D004614 ORTHO05D005339 3.6e-08 62.4 67 77.6
Thhalv10004272m.g Eutrema salsugineum HOM05D004614 ORTHO05D005339 3.6e-08 62.4 67 74.6
Peaxi162Scf00064g01132 Petunia axillaris HOM05D004614 ORTHO05D005339 3.6e-08 62.4 67 74.6
SGA_v2.0_scaffold275G46591 Striga asiatica HOM05D004614 ORTHO05D005339 3.6e-08 62.4 70 75.7
vmacro04401 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 3.6e-08 62.4 67 76.1
Ca_15438_v3 Cicer arietinum L. HOM05D004614 ORTHO05D005339 4.7e-08 62.0 67 85.1
Duzib093G0152 Durio zibethinus HOM05D004614 ORTHO05D005339 4.7e-08 62.0 67 77.6
Glyma.04G018400 Glycine max HOM05D004614 ORTHO05D005339 4.7e-08 62.0 67 85.1
Glyma.06G018700 Glycine max HOM05D004614 ORTHO05D005339 4.7e-08 62.0 67 85.1
HanXRQChr14g0428261 Helianthus annuus HOM05D004614 ORTHO05D005339 4.7e-08 62.0 70 74.3
Lalb_Chr11g0061661 Lupinus albus HOM05D004614 ORTHO05D005339 4.7e-08 62.0 67 85.1
Medtr3g115210 Medicago truncatula HOM05D004614 ORTHO05D005339 4.7e-08 62.0 67 82.1
Phvul.009G010200 Phaseolus vulgaris HOM05D004614 ORTHO05D005339 4.7e-08 62.0 67 85.1
Psat5g011520 Pisum sativum HOM05D004614 ORTHO05D005339 4.7e-08 62.0 67 85.1
TPR.G38127 Trifolium pratense HOM05D004614 ORTHO05D005339 4.7e-08 62.0 67 85.1
VMungo1309G2703 Vigna mungo HOM05D004614 ORTHO05D005339 4.7e-08 62.0 67 85.1
Nn5g30931 Nelumbo nucifera HOM05D004614 ORTHO05D005339 6.1e-08 61.6 67 76.1
vmacro21824 Vaccinium macrocarpon HOM05D004614 ORTHO05D005339 6.1e-08 61.6 67 74.6
COL.COLO4_04001 Corchorus olitorius HOM05D004614 ORTHO05D005339 8.0e-08 61.2 67 85.1
Gohir.A01G106500 Gossypium hirsutum HOM05D004614 ORTHO05D005339 1.0e-07 60.8 67 70.1
Aqoxy6G01739 Aquilegia oxysepala HOM05D004614 ORTHO05D005339 1.4e-07 60.5 67 71.6
Solyc12g094570.1 Solanum lycopersicum HOM05D004614 ORTHO05D005339 1.4e-07 60.5 70 78.6
Sopen12g031480 Solanum pennellii HOM05D004614 ORTHO05D005339 1.4e-07 60.5 70 78.6
Cpa.g.sc26.206 Carica papaya HOM05D004614 ORTHO05D005339 1.8e-07 60.1 67 88.1
Os03g0133300 Oryza sativa ssp. japonica HOM05D004614 ORTHO05D005339 1.8e-07 60.1 67 88.1
RcHm_v2.0_Chr6g0304201 Rosa chinensis HOM05D004614 ORTHO05D005339 1.8e-07 60.1 67 88.1
Actinidia37970 Actinidia chinensis HOM05D004614 ORTHO05D005339 4.0e-07 58.9 67 88.1
Duzib116G0199 Durio zibethinus HOM05D004614 ORTHO05D005339 4.0e-07 58.9 67 83.6
Sabra05G0193200 Salix brachista HOM05D004614 ORTHO05D005339 4.0e-07 58.9 67 86.6
Potri.005G249700 Populus trichocarpa HOM05D004614 ORTHO05D005339 5.2e-07 58.5 67 86.6
unitig_748.g7709 Utricularia gibba HOM05D004614 ORTHO05D005339 6.7e-07 58.2 70 71.4
GSVIVG01008677001 Vitis vinifera HOM05D004614 ORTHO05D005339 6.7e-07 58.2 67 88.1
FvH4_2g37530 Fragaria vesca HOM05D004614 ORTHO05D005339 8.8e-07 57.8 67 86.6
FAN15G3067 Fragaria x ananassa HOM05D004614 ORTHO05D005339 8.8e-07 57.8 67 86.6
FAN20G3039 Fragaria x ananassa HOM05D004614 ORTHO05D005339 8.8e-07 57.8 67 86.6
FAN27G1062 Fragaria x ananassa HOM05D004614 ORTHO05D005339 8.8e-07 57.8 67 86.6
HanXRQChr05g0146811 Helianthus annuus HOM05D004614 ORTHO05D005339 8.8e-07 57.8 70 84.3
PGSC0003DMG400029318 Solanum tuberosum HOM05D004614 ORTHO05D005339 1.2e-06 57.4 70 84.3
HanXRQChr15g0492731 Helianthus annuus HOM05D004614 ORTHO05D005339 1.5e-06 57.0 70 74.3
EL10Ac1g01977 Beta vulgaris HOM05D004614 ORTHO05D005339 4.4e-06 55.5 24 95.8
QL02p013984 Quercus lobata HOM05D004614 ORTHO05D005339 4.4e-06 55.5 67 70.1
CSS0047318 Camellia sinensis var. sinensis HOM05D004614 ORTHO05D005339 5.7e-06 55.1 33 78.8


User provided reference genes

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