Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1662 Punica granatum HOM05D004018 ORTHO05D004408 4.5e-50 201.1 108 100.0
PGR044G1283 Punica granatum HOM05D004018 ORTHO05D004408 7.9e-39 163.7 103 88.3
Manes.01G209500 Manihot esculenta HOM05D004018 ORTHO05D004408 2.7e-15 85.5 102 48.0
Actinidia09153 Actinidia chinensis HOM05D004018 ORTHO05D004408 5.2e-14 81.3 102 47.1
TAR633G0135 Trochodendron aralioides HOM05D004018 ORTHO05D004408 8.8e-14 80.5 102 48.0
Cpa.g.sc837.2 Carica papaya HOM05D004018 ORTHO05D004408 1.5e-13 79.7 102 50.0
Gohir.D12G005400 Gossypium hirsutum HOM05D004018 ORTHO05D004408 2.0e-13 79.3 102 49.0
Gohir.A12G005900 Gossypium hirsutum HOM05D004018 ORTHO05D004408 2.6e-13 79.0 102 50.0
Gorai.008G005300 Gossypium raimondii HOM05D004018 ORTHO05D004408 2.6e-13 79.0 102 49.0
TAR365G0933 Trochodendron aralioides HOM05D004018 ORTHO05D004408 5.7e-13 77.8 101 47.5
Gohir.A08G185500 Gossypium hirsutum HOM05D004018 ORTHO05D004408 7.4e-13 77.4 101 47.5
Dinv11249 Davidia involucrata HOM05D004018 ORTHO05D004408 9.7e-13 77.0 102 47.1
Thecc.01G282900 Theobroma cacao HOM05D004018 ORTHO05D004408 9.7e-13 77.0 101 49.5
TAR365G0909 Trochodendron aralioides HOM05D004018 ORTHO05D004408 9.7e-13 77.0 101 50.5
COL.COLO4_09133 Corchorus olitorius HOM05D004018 ORTHO05D004408 2.8e-12 75.5 103 46.6
MD11G1289200 Malus domestica HOM05D004018 ORTHO05D004408 4.8e-12 74.7 99 49.5
vmacro02552 Vaccinium macrocarpon HOM05D004018 ORTHO05D004408 1.1e-11 73.6 104 46.2
Rhsim13G0022700 Rhododendron simsii HOM05D000644 ORTHO05D004408 1.4e-11 73.2 103 46.6
TAR636G0803 Trochodendron aralioides HOM05D004018 ORTHO05D004408 7.0e-11 70.9 102 47.1
CSS0042185 Camellia sinensis var. sinensis HOM05D004018 ORTHO05D004408 1.2e-10 70.1 112 42.9
Duzib138G0587 Durio zibethinus HOM05D004018 ORTHO05D004408 1.2e-10 70.1 101 47.5
Duzib133G0055 Durio zibethinus HOM05D004018 ORTHO05D004408 1.6e-10 69.7 101 45.5
MD03G1268400 Malus domestica HOM05D004018 ORTHO05D004408 2.0e-10 69.3 101 43.6
RcHm_v2.0_Chr6g0291481 Rosa chinensis HOM05D004018 ORTHO05D004408 2.0e-10 69.3 106 43.4
Potri.014G139000 Populus trichocarpa HOM05D004018 ORTHO05D004408 2.6e-10 68.9 103 45.6
FAN20G3038 Fragaria x ananassa HOM05D000644 ORTHO05D004408 1.0e-09 67.0 106 41.5
FAN27G0494 Fragaria x ananassa HOM05D000644 ORTHO05D004408 1.0e-09 67.0 107 41.1
GSVIVG01011103001 Vitis vinifera HOM05D004018 ORTHO05D004408 1.0e-09 67.0 103 42.7
Aqoxy2G03257 Aquilegia oxysepala HOM05D004018 ORTHO05D004408 1.3e-09 66.6 102 45.1
Ciclev10018884m.g Citrus clementina HOM05D004018 ORTHO05D004408 1.3e-09 66.6 102 43.1
Haze_04739 Corylus avellana HOM05D004018 ORTHO05D004408 1.7e-09 66.2 117 40.2
FvH4_2g23870 Fragaria vesca HOM05D004018 ORTHO05D004408 2.2e-09 65.9 106 42.5
FAN15G3429 Fragaria x ananassa HOM05D000644 ORTHO05D004408 2.2e-09 65.9 106 40.6
FAN24G0467 Fragaria x ananassa HOM05D000644 ORTHO05D004408 2.2e-09 65.9 106 42.5
Atru.chr5.1370 Acer truncatum HOM05D004018 ORTHO05D004408 2.9e-09 65.5 103 41.7
CANSAT25G1423 Cannabis sativa HOM05D004018 ORTHO05D004408 2.9e-09 65.5 102 43.1
Gohir.D08G203601 Gossypium hirsutum HOM05D004018 ORTHO05D004408 3.8e-09 65.1 82 50.0
Hma1.2p1_0628F.1_g191955 Hydrangea macrophylla HOM05D004018 ORTHO05D004408 3.8e-09 65.1 123 38.2
Prupe.8G244100 Prunus persica HOM05D004018 ORTHO05D004408 5.0e-09 64.7 102 48.0
Peaxi162Scf00570g00314 Petunia axillaris HOM05D004018 ORTHO05D004408 6.5e-09 64.3 101 43.6
Eucgr.K03388 Eucalyptus grandis HOM05D004018 ORTHO05D004408 8.5e-09 63.9 103 46.6
PSO170G1481 Papaver somniferum HOM05D004018 ORTHO05D004408 8.5e-09 63.9 116 39.7
PSO407G0422 Papaver somniferum HOM05D004018 ORTHO05D004408 1.1e-08 63.5 116 38.8
Nn4g26185 Nelumbo nucifera HOM05D004018 ORTHO05D004408 1.5e-08 63.2 101 44.6
Atru.chr12.465 Acer truncatum HOM05D004018 ORTHO05D004408 2.5e-08 62.4 103 40.8
Sopen09g026560 Solanum pennellii HOM05D004018 ORTHO05D004408 2.5e-08 62.4 102 43.1
Ca_09771_v3 Cicer arietinum L. HOM05D004018 ORTHO05D004408 3.2e-08 62.0 103 41.7
VMungo0720G2698 Vigna mungo HOM05D004018 ORTHO05D004408 3.2e-08 62.0 101 41.6
Atru.chr12.487 Acer truncatum HOM05D004018 ORTHO05D004408 5.5e-08 61.2 103 39.8
Nitab4.5_0011633g0010 Nicotiana tabacum HOM05D004018 ORTHO05D004408 5.5e-08 61.2 102 41.2
Cfa006111 Carpinus fangiana HOM05D004018 ORTHO05D004408 7.2e-08 60.8 117 40.2
Glyma.10G025000 Glycine max HOM05D004018 ORTHO05D004408 1.2e-07 60.1 101 41.6
Solyc09g064860.3 Solanum lycopersicum HOM05D004018 ORTHO05D004408 1.2e-07 60.1 102 42.2
SalBow6G7233 Salvia bowleyana HOM05D004018 ORTHO05D004408 1.6e-07 59.7 101 42.6
Sed0026091 Sechium edule HOM05D004018 ORTHO05D004408 2.1e-07 59.3 115 39.1
MSTRG.12568 Avicennia marina HOM05D004018 ORTHO05D004408 2.7e-07 58.9 102 40.2
Sed0023986 Sechium edule HOM05D004018 ORTHO05D004408 2.7e-07 58.9 114 40.4
Actinidia00738 Actinidia chinensis HOM05D004018 ORTHO05D004408 3.6e-07 58.5 48 68.8
Nitab4.5_0001028g0170 Nicotiana tabacum HOM05D004018 ORTHO05D004408 3.6e-07 58.5 102 41.2
AUR62033708 Chenopodium quinoa HOM05D004018 ORTHO05D004408 4.7e-07 58.2 103 42.7
Migut.N02157 Erythranthe guttata HOM05D004018 ORTHO05D004408 4.7e-07 58.2 68 55.9
Migut.D00269 Erythranthe guttata HOM05D004018 ORTHO05D004408 8.0e-07 57.4 102 44.1
BraA03t12255Z Brassica rapa HOM05D004018 ORTHO05D004408 1.0e-06 57.0 103 38.8
Gorai.004G215600 Gossypium raimondii HOM05D004018 ORTHO05D004408 1.0e-06 57.0 65 53.8
Lj5g0010123 Lotus japonicus HOM05D004018 ORTHO05D004408 1.0e-06 57.0 101 39.6
AUR62036814 Chenopodium quinoa HOM05D004018 ORTHO05D004408 1.4e-06 56.6 103 42.7
Lalb_Chr02g0142861 Lupinus albus HOM05D004018 ORTHO05D004408 1.4e-06 56.6 101 38.6
Lalb_Chr21g0306531 Lupinus albus HOM05D004018 ORTHO05D004408 1.4e-06 56.6 101 37.6
BolC3t16038H Brassica oleracea HOM05D004018 ORTHO05D004408 1.8e-06 56.2 102 40.2
Thhalv10028568m.g Eutrema salsugineum HOM05D004018 ORTHO05D004408 1.8e-06 56.2 102 41.2
A03p30760 Brassica napus HOM05D004018 ORTHO05D004408 2.3e-06 55.8 103 38.8
SGA_v2.0_scaffold258G45767 Striga asiatica HOM05D004018 ORTHO05D004408 3.0e-06 55.5 102 39.2
AT4G02880 Arabidopsis thaliana HOM05D004018 ORTHO05D004408 5.2e-06 54.7 101 35.6
MSTRG.18219 Avicennia marina HOM05D004018 ORTHO05D004408 5.2e-06 54.7 102 39.2
C03p37460 Brassica napus HOM05D004018 ORTHO05D004408 5.2e-06 54.7 103 39.8
Sp6g02920 Schrenkiella parvula HOM05D004018 ORTHO05D004408 6.7e-06 54.3 101 37.6


User provided reference genes

Program Settings