Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 3.7e-84 315.5 247 100.0
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 4.8e-39 165.6 242 73.6
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 2.6e-37 159.8 240 72.1
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 1.4e-35 154.1 244 70.5
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 2.4e-35 153.3 244 70.9
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 2.4e-35 153.3 242 69.8
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 1.6e-34 150.6 261 67.8
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 2.7e-34 149.8 253 69.2
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 7.9e-34 148.3 254 67.7
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.0e-33 147.9 239 70.7
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 2.3e-33 146.7 239 67.8
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 2.3e-33 146.7 234 67.9
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 2.3e-33 146.7 235 69.8
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 3.0e-33 146.4 234 69.7
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 3.9e-33 146.0 245 69.8
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 6.6e-33 145.2 242 69.4
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 1.5e-32 144.1 238 68.5
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 1.5e-32 144.1 238 68.5
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 3.3e-32 142.9 249 67.1
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 5.6e-32 142.1 245 68.2
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 9.6e-32 141.4 241 69.7
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 1.6e-31 140.6 239 68.2
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 1.6e-31 140.6 239 68.2
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 1.6e-31 140.6 246 67.9
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 1.6e-31 140.6 244 71.3
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 2.8e-31 139.8 243 65.8
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 8.1e-31 138.3 252 65.5
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 1.4e-30 137.5 251 66.1
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.8e-30 137.1 255 65.9
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 1.8e-30 137.1 243 66.7
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 3.1e-30 136.3 249 66.3
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 4.0e-30 136.0 249 55.8
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 9.0e-30 134.8 235 67.7
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 9.0e-30 134.8 236 65.7
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 9.0e-30 134.8 242 69.4
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 9.0e-30 134.8 242 67.4
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 1.2e-29 134.4 242 64.5
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 1.5e-29 134.0 252 65.1
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 1.5e-29 134.0 237 65.4
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 1.5e-29 134.0 252 65.1
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 3.4e-29 132.9 233 66.1
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 4.5e-29 132.5 265 64.2
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 9.9e-29 131.3 238 66.0
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 9.9e-29 131.3 252 65.9
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 1.3e-28 131.0 254 65.0
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 1.3e-28 131.0 236 64.4
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 1.3e-28 131.0 237 64.6
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 1.3e-28 131.0 242 66.5
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 1.3e-28 131.0 255 65.5
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.7e-28 130.6 234 67.5
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 2.2e-28 130.2 236 64.8
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 2.9e-28 129.8 219 71.2
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.8e-28 129.4 253 63.6
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 4.9e-28 129.0 237 66.7
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 4.9e-28 129.0 242 66.1
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 6.4e-28 128.6 260 65.0
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 6.4e-28 128.6 252 65.1
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 1.9e-27 127.1 203 73.9
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 1.9e-27 127.1 253 63.2
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 1.9e-27 127.1 239 65.3
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 2.4e-27 126.7 234 64.5
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.2e-27 126.3 234 67.1
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 3.2e-27 126.3 248 63.7
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 5.5e-27 125.6 249 63.9
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 9.3e-27 124.8 235 66.8
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 1.2e-26 124.4 268 61.9
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 1.6e-26 124.0 233 67.8
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 2.1e-26 123.6 172 79.7
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 2.1e-26 123.6 241 63.5
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 3.5e-26 122.9 262 63.0
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 1.0e-25 121.3 251 62.2
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 1.3e-25 120.9 238 66.0
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 3.9e-25 119.4 271 60.1
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 6.7e-25 118.6 245 51.4
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 6.7e-25 118.6 241 63.5
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 8.7e-25 118.2 266 59.8
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 8.7e-25 118.2 266 59.8
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 1.1e-24 117.9 253 63.6
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 3.3e-24 116.3 192 74.0
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 4.3e-24 115.9 83 68.7
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 1.3e-23 114.4 266 60.9
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 1.3e-23 114.4 306 55.2
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 1.3e-23 114.4 170 80.0
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 1.1e-22 111.3 235 62.6
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.1e-22 111.3 72 73.6
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 1.2e-21 107.8 184 56.0
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 1.5e-21 107.5 64 78.1
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 1.5e-21 107.5 259 60.6
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 1.5e-21 107.5 230 64.3
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 2.6e-21 106.7 235 59.6
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 3.4e-21 106.3 212 66.0
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 4.9e-20 102.4 247 61.1
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 1.4e-19 100.9 297 54.2
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 5.5e-19 99.0 204 68.6
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 1.5e-16 90.9 233 60.5
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 2.5e-16 90.1 69 58.0
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 1.6e-15 87.4 201 67.7
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 2.1e-15 87.0 270 55.2
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 3.7e-15 86.3 267 55.8
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 6.3e-15 85.5 87 54.0
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 6.3e-15 85.5 68 57.4
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 4.1e-14 82.8 90 51.1
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 1.7e-12 77.4 199 47.2
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 1.7e-12 77.4 382 42.9
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 2.9e-12 76.6 228 57.9
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 5.0e-12 75.9 260 53.1
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 1.1e-11 74.7 208 64.9
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.9e-11 73.9 204 33.3
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.2e-10 71.2 202 64.4
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 1.2e-10 71.2 262 55.0
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 3.9e-09 66.2 62 51.6
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.1e-08 64.7 34 82.4
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 1.3e-07 61.2 45 57.8
Nitab4.5_0001175g0040 Nicotiana tabacum HOM05D006475 ORTHO05D007969 1.6e-07 60.8 194 47.9
Sc07g0008230 Simmondsia chinensis HOM05D006475 ORTHO05D007969 8.2e-07 58.5 191 60.2
Dinv28011 Davidia involucrata HOM05D006475 ORTHO05D007969 3.1e-06 56.6 105 44.8
QL08p050705 Quercus lobata HOM05D006475 ORTHO05D007969 5.3e-06 55.8 54 61.1


User provided reference genes

Program Settings