Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1522 Punica granatum HOM05D013472 ORTHO05D015108 3.7e-285 984.2 491 100.0
PGR142G2288 Punica granatum HOM05D013472 ORTHO05D015108 6.7e-194 681.0 490 68.4
PGR119G2091 Punica granatum HOM05D013472 ORTHO05D015108 1.5e-193 679.9 490 68.6
PGR142G1294 Punica granatum HOM05D013472 ORTHO05D015108 9.7e-193 677.2 490 68.8
PGR044G2228 Punica granatum HOM05D013472 ORTHO05D015108 3.8e-189 665.2 490 66.1
PGR083G1646 Punica granatum HOM05D013472 ORTHO05D015108 1.2e-187 660.2 490 66.9
PGR142G0060 Punica granatum HOM05D013472 ORTHO05D015108 9.4e-164 580.9 404 70.3
PGR031G1298 Punica granatum HOM05D013472 ORTHO05D015108 4.2e-148 528.9 491 58.0
PGR042G3387 Punica granatum HOM05D013472 ORTHO05D015108 2.0e-121 440.3 295 73.2
PGR031G0529 Punica granatum HOM05D013472 ORTHO05D015108 5.6e-31 139.8 133 59.4
Sed0006040 Sechium edule HOM05D002881 ORTHO05D010329 1.8e-26 124.8 499 23.4
Thecc.10G137400 Theobroma cacao HOM05D002881 ORTHO05D002983 9.2e-26 122.5 357 26.9
TWI53G0826 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 1.9e-23 114.8 316 26.6
PGR044G0485 Punica granatum HOM05D000047 ORTHO05D000589 1.6e-22 111.7 75 61.3
Sopen05g014510 Solanum pennellii HOM05D002047 ORTHO05D001422 8.9e-21 105.9 361 25.8
TWI23G0459 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 5.8e-20 103.2 317 26.2
Thecc.06G098800 Theobroma cacao HOM05D002881 ORTHO05D010329 8.3e-19 99.4 288 27.8
TWI56G0801 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 8.3e-19 99.4 442 24.9
Sopen02g007640 Solanum pennellii HOM05D002047 ORTHO05D001422 1.4e-18 98.6 381 24.4
Sopen11g020140 Solanum pennellii HOM05D002047 ORTHO05D001422 1.6e-17 95.1 406 24.9
TWI79G0344 Tripterygium wilfordii HOM05D002881 ORTHO05D002983 6.0e-17 93.2 216 29.2
Gorai.002G202700 Gossypium raimondii HOM05D002881 ORTHO05D002983 7.8e-17 92.8 210 27.1
Thecc.05G210100 Theobroma cacao HOM05D002881 ORTHO05D002983 2.3e-16 91.3 300 25.7
Thecc.02G286200 Theobroma cacao HOM05D002881 ORTHO05D002983 1.1e-15 89.0 304 24.3
Sopen01g005990 Solanum pennellii HOM05D002047 ORTHO05D001422 2.1e-14 84.7 383 24.5
Sopen04g022160 Solanum pennellii HOM05D002047 ORTHO05D001422 3.6e-14 84.0 396 22.5
Lalb_Chr03g0038261 Lupinus albus HOM05D002881 ORTHO05D002983 1.8e-13 81.6 316 24.1
Gohir.D13G093150 Gossypium hirsutum HOM05D002881 ORTHO05D002983 3.1e-13 80.9 309 23.3
Gorai.001G080800 Gossypium raimondii HOM05D002881 ORTHO05D002983 4.0e-13 80.5 271 23.2
Sopen08g015910 Solanum pennellii HOM05D000047 ORTHO05D000044 8.9e-13 79.3 339 23.9
Gohir.D01G148150 Gossypium hirsutum HOM05D002881 ORTHO05D002983 2.0e-12 78.2 272 23.5
QL04p096945 Quercus lobata HOM05D013472 ORTHO05D002983 2.0e-12 78.2 264 24.6
TPR.G23480 Trifolium pratense HOM05D002881 ORTHO05D002983 5.8e-12 76.6 307 22.8
Duzib235G1144 Durio zibethinus HOM05D002881 ORTHO05D002983 9.8e-12 75.9 338 20.7
Sopen03g025130 Solanum pennellii HOM05D000047 ORTHO05D013907 1.7e-11 75.1 341 23.5
Sopen00g005910 Solanum pennellii HOM05D002047 ORTHO05D001422 2.9e-11 74.3 339 23.6
MBI16_g17764_MAGBIO Magnolia biondii HOM05D003711 ORTHO05D001786 6.4e-11 73.2 284 23.6
Sopen03g011960 Solanum pennellii HOM05D008695 ORTHO05D001422 1.4e-10 72.0 480 22.5
Gorai.010G160500 Gossypium raimondii HOM05D002881 ORTHO05D002983 2.4e-10 71.2 217 27.2
Potri.T002768 Populus trichocarpa HOM05D002881 ORTHO05D002983 2.4e-10 71.2 179 29.6
Sopen01g015000 Solanum pennellii HOM05D008695 ORTHO05D001422 2.4e-10 71.2 480 22.7
vmacro10773 Vaccinium macrocarpon HOM05D015182 ORTHO05D000827 3.2e-10 70.9 304 25.0
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 4.1e-10 70.5 481 22.9
MBI18_g15614_MAGBIO Magnolia biondii HOM05D003711 ORTHO05D001786 5.4e-10 70.1 279 23.3
Sopen05g015790 Solanum pennellii HOM05D002047 ORTHO05D001422 7.1e-10 69.7 382 21.2
Sopen11g019410 Solanum pennellii HOM05D002047 ORTHO05D001422 7.1e-10 69.7 234 24.8
Medtr5g084310 Medicago truncatula HOM05D002881 ORTHO05D002983 1.2e-09 68.9 331 22.4
Medtr5g085650 Medicago truncatula HOM05D002881 ORTHO05D002983 1.2e-09 68.9 331 22.4
Medtr7g079940 Medicago truncatula HOM05D002881 ORTHO05D002983 1.2e-09 68.9 331 22.4
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-09 68.6 301 22.6
Medtr5g040810 Medicago truncatula HOM05D002881 ORTHO05D002983 1.6e-09 68.6 335 22.4
TWI56G1458 Tripterygium wilfordii HOM05D036929 ORTHO05D010329 1.6e-09 68.6 350 23.1
EL10Ac9g22434 Beta vulgaris HOM05D056876 ORTHO05D010968 2.1e-09 68.2 295 24.7
PGSC0003DMG400014865 Solanum tuberosum HOM05D008695 ORTHO05D001422 2.1e-09 68.2 317 24.9
Nitab4.5_0001116g0050 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.5e-09 67.4 297 23.9
Sopen08g008690 Solanum pennellii HOM05D000002 ORTHO05D000001 3.5e-09 67.4 401 21.7
PGR042G1687 Punica granatum HOM05D000047 ORTHO05D015108 4.6e-09 67.0 57 56.1
Sopen05g021760 Solanum pennellii HOM05D008695 ORTHO05D001422 1.0e-08 65.9 462 23.2
Eucgr.B01582 Eucalyptus grandis HOM05D013472 ORTHO05D015108 2.3e-08 64.7 241 24.9
Nitab4.5_0010485g0010 Nicotiana tabacum HOM05D002047 ORTHO05D001422 3.9e-08 63.9 292 24.0
Thecc.07G191800 Theobroma cacao HOM05D002881 ORTHO05D002983 1.5e-07 62.0 289 22.8
Sopen04g020150 Solanum pennellii HOM05D002047 ORTHO05D001422 1.9e-07 61.6 225 25.8
Medtr3g013580 Medicago truncatula HOM05D002881 ORTHO05D002983 2.5e-07 61.2 321 21.2
Medtr3g051650 Medicago truncatula HOM05D002881 ORTHO05D002983 2.5e-07 61.2 330 21.5
Thecc.02G249500 Theobroma cacao HOM05D002881 ORTHO05D010329 2.5e-07 61.2 114 32.5
FvH4_6g37771 Fragaria vesca HOM05D000176 ORTHO05D000106 3.3e-07 60.8 367 21.8
Medtr7g006680 Medicago truncatula HOM05D002881 ORTHO05D002983 4.3e-07 60.5 329 20.7
Medtr7g046110 Medicago truncatula HOM05D002881 ORTHO05D002983 4.3e-07 60.5 329 20.7
RcHm_v2.0_Chr2g0150841 Rosa chinensis HOM05D000176 ORTHO05D000106 4.3e-07 60.5 367 21.8
Thecc.04G051200 Theobroma cacao HOM05D002881 ORTHO05D002983 4.3e-07 60.5 167 28.1
Medtr5g080530 Medicago truncatula HOM05D002881 ORTHO05D002983 5.6e-07 60.1 329 20.7
MELO3C019704.2 Cucumis melo HOM05D000176 ORTHO05D000106 9.5e-07 59.3 358 22.9
CsaV3_6G015670 Cucumis sativus L. HOM05D000176 ORTHO05D000106 9.5e-07 59.3 358 22.9
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 9.5e-07 59.3 334 21.3
Medtr5g074255 Medicago truncatula HOM05D002881 ORTHO05D002983 9.5e-07 59.3 456 20.4
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 1.2e-06 58.9 304 24.3
MBI08_g06888_MAGBIO Magnolia biondii HOM05D003711 ORTHO05D001786 1.2e-06 58.9 252 23.0
Medtr6g027000 Medicago truncatula HOM05D002881 ORTHO05D002983 1.2e-06 58.9 460 20.4
Medtr7g028120 Medicago truncatula HOM05D002881 ORTHO05D002983 1.2e-06 58.9 460 20.4
Sopen01g005980 Solanum pennellii HOM05D002047 ORTHO05D001422 1.2e-06 58.9 298 25.8
vmacro16092 Vaccinium macrocarpon HOM05D001028 ORTHO05D000827 1.2e-06 58.9 293 23.5
Sopen09g007730 Solanum pennellii HOM05D008695 ORTHO05D001422 1.6e-06 58.5 219 23.7
Lj9A412T42 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-06 57.8 227 22.0
Medtr3g082580 Medicago truncatula HOM05D002881 ORTHO05D002983 2.8e-06 57.8 456 20.2
Medtr5g028560 Medicago truncatula HOM05D002881 ORTHO05D002983 2.8e-06 57.8 460 21.1
Peaxi162Scf00384g01218 Petunia axillaris HOM05D000176 ORTHO05D000106 2.8e-06 57.8 368 21.7
Thecc.05G072600 Theobroma cacao HOM05D002881 ORTHO05D002983 2.8e-06 57.8 167 27.5
MELO3C031109.2 Cucumis melo HOM05D002881 ORTHO05D002983 3.6e-06 57.4 168 27.4
Medtr1g018990 Medicago truncatula HOM05D002881 ORTHO05D002983 3.6e-06 57.4 456 20.2
Sed0012746 Sechium edule HOM05D000176 ORTHO05D000106 3.6e-06 57.4 358 24.0
Actinidia11188 Actinidia chinensis HOM05D000176 ORTHO05D000106 4.7e-06 57.0 361 21.3
Medtr0029s0060 Medicago truncatula HOM05D002881 ORTHO05D002983 4.7e-06 57.0 460 20.9
Medtr3g100770 Medicago truncatula HOM05D002881 ORTHO05D002983 6.2e-06 56.6 458 21.4
Medtr5g036210 Medicago truncatula HOM05D002881 ORTHO05D002983 6.2e-06 56.6 458 21.4


User provided reference genes

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