Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1466 Punica granatum HOM05D008010 ORTHO05D010085 6.8e-157 557.4 300 100.0
GSVIVG01021245001 Vitis vinifera HOM05D008010 ORTHO05D010085 1.0e-43 181.4 212 56.1
Dinv12764 Davidia involucrata HOM05D008010 ORTHO05D010085 2.3e-43 180.3 280 48.2
Eucgr.D00477 Eucalyptus grandis HOM05D008010 ORTHO05D010085 3.4e-39 166.4 240 50.4
Sabra11G0053600 Salix brachista HOM05D004193 ORTHO05D004862 9.8e-39 164.9 244 48.4
Haze_06192 Corylus avellana HOM05D008010 ORTHO05D010085 4.9e-38 162.5 270 44.8
FAN21G0683 Fragaria x ananassa HOM05D008010 ORTHO05D010085 4.1e-37 159.5 282 44.7
Sabra11G0057100 Salix brachista HOM05D008010 ORTHO05D010085 1.2e-36 157.9 212 50.0
CiPaw.09G071800 Carya illinoinensis HOM05D008010 ORTHO05D010085 4.6e-36 156.0 257 43.6
Cfa000638 Carpinus fangiana HOM05D008010 ORTHO05D010085 1.3e-35 154.5 277 43.3
Thecc.06G167300 Theobroma cacao HOM05D008010 ORTHO05D010085 3.3e-34 149.8 248 44.0
Prupe.4G065300 Prunus persica HOM05D008010 ORTHO05D010085 7.3e-34 148.7 218 48.2
Manes.16G041900 Manihot esculenta HOM05D008010 ORTHO05D010085 4.7e-33 146.0 212 50.0
Nn3g21124 Nelumbo nucifera HOM05D008010 ORTHO05D010085 8.9e-32 141.7 254 45.3
FvH4_3g07440 Fragaria vesca HOM05D008010 ORTHO05D010085 3.4e-31 139.8 255 45.1
RcHm_v2.0_Chr5g0011411 Rosa chinensis HOM05D008010 ORTHO05D010085 4.4e-31 139.4 265 43.4
Potri.011G069300 Populus trichocarpa HOM05D008010 ORTHO05D010085 5.8e-31 139.0 174 48.3
ClCG03G007530 Citrullus lanatus HOM05D008010 ORTHO05D010085 1.7e-30 137.5 254 42.5
Potri.004G059300 Populus trichocarpa HOM05D008010 ORTHO05D010085 2.9e-30 136.7 183 47.5
FAN25G1163 Fragaria x ananassa HOM05D008010 ORTHO05D010085 6.4e-30 135.6 260 43.5
QL05p048352 Quercus lobata HOM05D008010 ORTHO05D010085 1.1e-29 134.8 277 40.4
Gohir.A06G132400 Gossypium hirsutum HOM05D008010 ORTHO05D010085 9.2e-29 131.7 248 42.7
Aqoxy1G02001 Aquilegia oxysepala HOM05D004193 ORTHO05D004862 1.6e-28 131.0 209 44.5
Cc02_g15430 Coffea canephora HOM05D008010 ORTHO05D010085 2.7e-28 130.2 266 41.4
Lj6g0013702 Lotus japonicus HOM05D008010 ORTHO05D010085 6.0e-28 129.0 263 40.7
Lalb_Chr18g0054681 Lupinus albus HOM05D008010 ORTHO05D010085 7.8e-28 128.6 186 45.7
PGSC0003DMG401028427 Solanum tuberosum HOM05D004193 ORTHO05D004862 5.1e-27 125.9 245 42.9
Gorai.010G160200 Gossypium raimondii HOM05D008010 ORTHO05D010085 8.6e-27 125.2 246 42.3
Gohir.D06G137900 Gossypium hirsutum HOM05D008010 ORTHO05D010085 1.1e-26 124.8 246 41.9
TAR624G0391 Trochodendron aralioides HOM05D008010 ORTHO05D010085 1.9e-26 124.0 135 54.1
Atru.chr10.1588_Atru.chr10.1589 Acer truncatum HOM05D008010 ORTHO05D010085 3.3e-26 123.2 214 41.6
Solyc02g072260.4 Solanum lycopersicum HOM05D008010 ORTHO05D010085 4.3e-26 122.9 243 41.6
FAN16G3557 Fragaria x ananassa HOM05D008010 ORTHO05D010085 5.6e-26 122.5 234 42.3
Peaxi162Scf00371g00017 Petunia axillaris HOM05D008010 ORTHO05D010085 1.2e-25 121.3 253 41.1
Sopen02g021240 Solanum pennellii HOM05D008010 ORTHO05D010085 1.2e-25 121.3 258 40.3
Nitab4.5_0008462g0010 Nicotiana tabacum HOM05D008010 ORTHO05D010085 2.1e-25 120.6 259 40.9
MELO3C002669.2 Cucumis melo HOM05D008010 ORTHO05D010085 2.8e-25 120.2 257 39.7
Cpa.g.sc7.102 Carica papaya HOM05D008010 ORTHO05D010085 4.7e-25 119.4 178 46.1
Nitab4.5_0002185g0010 Nicotiana tabacum HOM05D008010 ORTHO05D010085 8.1e-25 118.6 258 41.9
Ciclev10016384m.g Citrus clementina HOM05D008010 ORTHO05D010085 1.4e-24 117.9 253 39.5
CAN.G411.60 Capsicum annuum HOM05D008010 ORTHO05D010085 1.8e-24 117.5 257 39.3
DCAR_027988 Daucus carota HOM05D008010 ORTHO05D010085 2.4e-24 117.1 214 41.6
MD05G1297000 Malus domestica HOM05D008010 ORTHO05D010085 1.2e-23 114.8 224 41.5
Duzib160G0139 Durio zibethinus HOM05D008010 ORTHO05D010085 3.4e-23 113.2 213 39.9
MBI07_g09547_MAGBIO Magnolia biondii HOM05D008010 ORTHO05D010085 5.8e-23 112.5 138 51.4
THA.LOC104806163 Tarenaya hassleriana HOM05D008010 ORTHO05D010085 5.8e-23 112.5 209 42.6
CsaV3_1G033180 Cucumis sativus L. HOM05D008010 ORTHO05D010085 1.7e-22 110.9 216 42.1
Lsat_1_v5_gn_1_109280 Lactuca sativa HOM05D008010 ORTHO05D010085 2.2e-22 110.5 196 44.4
ATR0127G032 Amborella trichopoda HOM05D008010 ORTHO05D010085 6.4e-22 109.0 240 37.9
Migut.M01016 Erythranthe guttata HOM05D008010 ORTHO05D010085 1.4e-21 107.8 270 36.3
Actinidia16781 Actinidia chinensis HOM05D008010 ORTHO05D010085 1.9e-21 107.5 165 47.9
SGA_v2.0_scaffold1G00067 Striga asiatica HOM05D008010 ORTHO05D010085 5.4e-21 105.9 293 33.4
Sed0009144 Sechium edule HOM05D008010 ORTHO05D010085 2.7e-20 103.6 216 40.3
AT4G18740 Arabidopsis thaliana HOM05D008010 ORTHO05D010085 1.7e-19 100.9 213 40.4
arahy.Tifrunner.gnm1.ann1.NGY302 Arachis hypogaea HOM05D008010 ORTHO05D010085 3.0e-19 100.1 247 36.8
EL10Ac8g20573 Beta vulgaris HOM05D008010 ORTHO05D010085 5.1e-19 99.4 258 36.4
BcaC09g51471 Brassica carinata HOM05D008010 ORTHO05D010085 5.1e-19 99.4 173 42.2
CDE03G0033 Ceratophyllum demersum HOM05D008010 ORTHO05D010085 1.9e-18 97.4 228 36.8
arahy.Tifrunner.gnm1.ann1.42QDDD Arachis hypogaea HOM05D008010 ORTHO05D010085 4.3e-18 96.3 210 38.1
COL.COLO4_31257 Corchorus olitorius HOM05D008010 ORTHO05D010085 1.3e-17 94.7 116 49.1
C01p12720 Brassica napus HOM05D008010 ORTHO05D010085 1.6e-17 94.4 201 38.8
ECA248G1583 Erigeron canadensis HOM05D000006 ORTHO05D000091 2.1e-17 94.0 184 44.0
BolC1t01249H Brassica oleracea HOM05D008010 ORTHO05D010085 2.8e-17 93.6 201 38.8
Ah.14g087050 Amaranthus hybridus HOM05D004193 ORTHO05D004862 3.6e-17 93.2 178 42.7
AL7G35510 Arabidopsis lyrata HOM05D008010 ORTHO05D010085 8.1e-17 92.0 200 40.5
CARHR225590 Cardamine hirsuta HOM05D008010 ORTHO05D010085 2.4e-16 90.5 203 36.5
BcaNung05918 Brassica carinata HOM05D008010 ORTHO05D010085 5.3e-16 89.4 202 38.6
AUR62039459 Chenopodium quinoa HOM05D008010 ORTHO05D010085 3.4e-15 86.7 210 38.1
BraA01t01022Z Brassica rapa HOM05D008010 ORTHO05D010085 7.6e-15 85.5 210 35.2
A01p10760 Brassica napus HOM05D008010 ORTHO05D010085 1.7e-14 84.3 210 35.2
ECA248G2359 Erigeron canadensis HOM05D008010 ORTHO05D010085 2.2e-14 84.0 165 43.6
AUR62027705 Chenopodium quinoa HOM05D008010 ORTHO05D010085 3.8e-14 83.2 221 37.1
Thhalv10026132m.g Eutrema salsugineum HOM05D008010 ORTHO05D010085 1.1e-13 81.6 171 36.8
CDE04G0279 Ceratophyllum demersum HOM05D008010 ORTHO05D010085 2.7e-12 77.0 215 34.4
AUR62011844 Chenopodium quinoa HOM05D005109 ORTHO05D006084 2.8e-09 67.0 206 32.5
GSVIVG01028346001 Vitis vinifera HOM05D005109 ORTHO05D006084 2.8e-09 67.0 216 30.1
SGA_v2.0_scaffold1G00251 Striga asiatica HOM05D008010 ORTHO05D010085 4.8e-09 66.2 108 41.7
Carub.0007s2250 Capsella rubella HOM05D008010 ORTHO05D010085 6.2e-09 65.9 199 30.7
Sp7g17440 Schrenkiella parvula HOM05D008010 ORTHO05D010085 1.8e-08 64.3 195 31.8
Solyc09g025260.4 Solanum lycopersicum HOM05D005109 ORTHO05D006084 4.0e-08 63.2 197 28.9
MBI10_g20266_MAGBIO Magnolia biondii HOM05D005109 ORTHO05D006084 5.3e-08 62.8 226 27.0
Cc01_g18260 Coffea canephora HOM05D005109 ORTHO05D006084 9.0e-08 62.0 236 28.8
Oeu063313.1 Olea europaea HOM05D005109 ORTHO05D006084 9.9e-07 58.5 243 27.2
SGA_v2.0_scaffold1G00618 Striga asiatica HOM05D003989 ORTHO05D004626 9.9e-07 58.5 235 27.2
unitig_85.g27297 Utricularia gibba HOM05D008010 ORTHO05D010085 1.3e-06 58.2 194 30.4
CSS0032892 Camellia sinensis var. sinensis HOM05D005109 ORTHO05D006084 2.2e-06 57.4 231 29.0
Migut.N02209 Erythranthe guttata HOM05D005109 ORTHO05D006084 3.8e-06 56.6 209 29.7


User provided reference genes

Program Settings