Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1460 Punica granatum HOM05D023452 ORTHO05D019051 1.6e-246 855.5 408 100.0
PGR031G0854 Punica granatum HOM05D023452 ORTHO05D019051 2.0e-207 725.7 399 88.7
PGR031G1231 Punica granatum HOM05D023452 ORTHO05D019051 3.1e-176 622.1 392 77.6
PGR031G3116 Punica granatum HOM05D023452 ORTHO05D019051 1.5e-151 540.0 324 79.9
PGR044G2517 Punica granatum HOM05D023452 ORTHO05D019051 2.7e-108 396.4 418 55.0
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 2.9e-17 94.0 145 38.6
COL.COLO4_29429 Corchorus olitorius HOM05D035412 ORTHO05D019051 3.8e-17 93.6 189 34.4
Rhsim02G0161800 Rhododendron simsii HOM05D015811 ORTHO05D014676 7.1e-16 89.4 247 30.0
Rhsim04G0226600 Rhododendron simsii HOM05D015811 ORTHO05D014676 3.5e-15 87.0 247 30.4
COL.COLO4_29430 Corchorus olitorius HOM05D035412 ORTHO05D019051 6.1e-15 86.3 134 35.8
Rhsim04G0226100 Rhododendron simsii HOM05D015811 ORTHO05D014676 1.9e-13 81.3 205 30.2
Rhsim02G0162400 Rhododendron simsii HOM05D015811 ORTHO05D014676 2.8e-12 77.4 205 31.2
Rhsim04G0227100 Rhododendron simsii HOM05D015811 ORTHO05D014676 6.3e-12 76.3 203 31.5
Rhsim04G0226700 Rhododendron simsii HOM05D015811 ORTHO05D014676 5.3e-11 73.2 252 28.6
Rhsim02G0162000 Rhododendron simsii HOM05D015811 ORTHO05D014676 3.4e-10 70.5 252 28.6
RhsimUnG0050900 Rhododendron simsii HOM05D015811 ORTHO05D014676 1.7e-09 68.2 129 34.1
CSS0027353 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 2.9e-09 67.4 150 36.7
QL09p046570 Quercus lobata HOM05D007419 ORTHO05D009327 3.8e-09 67.0 125 34.4
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 1.6e-07 61.6 164 31.7
Aqoxy2G03550 Aquilegia oxysepala HOM05D013671 ORTHO05D010877 2.7e-07 60.8 118 34.7
Dinv28162 Davidia involucrata HOM05D011324 ORTHO05D013448 2.7e-07 60.8 125 36.8
Dinv28167 Davidia involucrata HOM05D011324 ORTHO05D013448 4.6e-07 60.1 123 37.4
COL.COLO4_16992 Corchorus olitorius HOM05D017991 ORTHO05D020493 6.1e-07 59.7 154 31.2
Dinv28165 Davidia involucrata HOM05D011324 ORTHO05D013448 1.0e-06 58.9 123 36.6
COL.COLO4_16993 Corchorus olitorius HOM05D017991 ORTHO05D020493 1.4e-06 58.5 155 30.3
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 3.0e-06 57.4 140 32.1
Lj5A253T37 Lonicera japonica HOM05D012292 ORTHO05D012234 3.0e-06 57.4 191 27.2
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.1e-06 56.6 166 31.9
CSS0012204 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 6.7e-06 56.2 149 29.5
Ca_16893_v3 Cicer arietinum L. HOM05D000249 ORTHO05D000206 6.7e-06 56.2 123 33.3
Thecc.03G305700 Theobroma cacao HOM05D017991 ORTHO05D020493 6.7e-06 56.2 147 29.9
arahy.Tifrunner.gnm1.ann1.F06NHS Arachis hypogaea HOM05D000249 ORTHO05D000206 8.8e-06 55.8 158 29.1
arahy.Tifrunner.gnm1.ann1.UKW8RL Arachis hypogaea HOM05D000249 ORTHO05D000206 8.8e-06 55.8 158 29.1
Dinv28170 Davidia involucrata HOM05D011324 ORTHO05D013448 8.8e-06 55.8 119 35.3


User provided reference genes

Program Settings