Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1324 Punica granatum HOM05D007866 ORTHO05D003871 2.3e-79 298.9 159 100.0
Potri.016G103700 Populus trichocarpa HOM05D007866 ORTHO05D003871 9.6e-17 90.9 167 40.1
Manes.09G098200 Manihot esculenta HOM05D007866 ORTHO05D003871 2.4e-15 86.3 147 42.2
Potri.006G092200 Populus trichocarpa HOM05D007866 ORTHO05D003871 6.9e-15 84.7 168 37.5
Ciclev10013493m.g Citrus clementina HOM05D007866 ORTHO05D003871 9.0e-15 84.3 166 39.8
Gohir.A09G152500 Gossypium hirsutum HOM05D007866 ORTHO05D003871 1.2e-14 84.0 157 40.8
Thecc.05G029400 Theobroma cacao HOM05D007866 ORTHO05D003871 4.4e-14 82.0 170 36.5
Gorai.006G169200 Gossypium raimondii HOM05D007866 ORTHO05D003871 7.6e-14 81.3 157 40.1
Gohir.D09G148200 Gossypium hirsutum HOM05D007866 ORTHO05D003871 2.2e-13 79.7 157 39.5
Prupe.6G264300 Prunus persica HOM05D007866 ORTHO05D003871 3.8e-13 79.0 134 39.6
Sabra16G0103600 Salix brachista HOM05D007866 ORTHO05D003871 3.8e-13 79.0 177 36.7
Haze_20881 Corylus avellana HOM05D007866 ORTHO05D003871 1.1e-12 77.4 160 40.6
Haze_20890 Corylus avellana HOM05D007866 ORTHO05D003871 1.1e-12 77.4 160 40.6
COL.COLO4_14698 Corchorus olitorius HOM05D007866 ORTHO05D003871 4.2e-12 75.5 155 40.0
Atru.chr8.2088 Acer truncatum HOM05D007866 ORTHO05D003871 5.4e-12 75.1 152 36.2
Phvul.010G009300 Phaseolus vulgaris HOM05D007866 ORTHO05D003871 5.4e-12 75.1 140 40.0
Eucgr.B02728 Eucalyptus grandis HOM05D007866 ORTHO05D003871 1.6e-11 73.6 162 37.0
Lalb_Chr07g0193271 Lupinus albus HOM05D007866 ORTHO05D003871 6.0e-11 71.6 144 36.8
QL07p028342 Quercus lobata HOM05D007866 ORTHO05D003871 6.0e-11 71.6 169 36.1
CiPaw.09G201000 Carya illinoinensis HOM05D007866 ORTHO05D003871 1.3e-10 70.5 171 38.0
Duzib128G0987 Durio zibethinus HOM05D007866 ORTHO05D003871 2.3e-10 69.7 166 34.9
MD12G1154500 Malus domestica HOM05D007866 ORTHO05D003871 2.3e-10 69.7 138 34.8
VMungo0331G0444 Vigna mungo HOM05D007866 ORTHO05D003871 3.0e-10 69.3 140 37.9
RcHm_v2.0_Chr3g0464671 Rosa chinensis HOM05D007866 ORTHO05D003871 3.9e-10 68.9 145 37.2
Glyma.03G073100 Glycine max HOM05D007866 ORTHO05D003871 5.1e-10 68.6 144 37.5
Gohir.D01G209950 Gossypium hirsutum HOM05D007866 ORTHO05D003871 5.1e-10 68.6 95 47.4
Gorai.002G255600 Gossypium raimondii HOM05D007866 ORTHO05D003871 2.5e-09 66.2 95 46.3
Actinidia29169 Actinidia chinensis HOM05D007866 ORTHO05D003871 3.3e-09 65.9 162 35.8
Carub.0003s0839 Capsella rubella HOM05D007866 ORTHO05D003871 3.3e-09 65.9 64 54.7
Peaxi162Scf00014g00168 Petunia axillaris HOM05D007866 ORTHO05D003871 9.6e-09 64.3 70 48.6
FvH4_6g12750 Fragaria vesca HOM05D007866 ORTHO05D003871 1.3e-08 63.9 157 33.8
FAN09G3925 Fragaria x ananassa HOM05D007866 ORTHO05D003871 1.3e-08 63.9 157 33.8
FAN14G2102 Fragaria x ananassa HOM05D007866 ORTHO05D003871 1.3e-08 63.9 157 33.8
Gohir.A01G221050 Gossypium hirsutum HOM05D007866 ORTHO05D003871 1.3e-08 63.9 98 44.9
Solyc09g011430.1 Solanum lycopersicum HOM05D007866 ORTHO05D003871 1.3e-08 63.9 161 36.0
CSS0026310 Camellia sinensis var. sinensis HOM05D007866 ORTHO05D003871 1.6e-08 63.5 162 34.0
EL10Ac7g16230 Beta vulgaris HOM05D007866 ORTHO05D003871 2.1e-08 63.2 100 37.0
BraA03t12778Z Brassica rapa HOM05D007866 ORTHO05D003871 6.2e-08 61.6 43 62.8
CsaV3_4G025580 Cucumis sativus L. HOM05D007866 ORTHO05D003871 6.2e-08 61.6 151 35.8
Glyma.01G105300 Glycine max HOM05D007866 ORTHO05D003871 6.2e-08 61.6 142 35.9
THA.LOC104816660 Tarenaya hassleriana HOM05D007866 ORTHO05D003871 6.2e-08 61.6 40 70.0
BcaB04g18538 Brassica carinata HOM05D007866 ORTHO05D003871 8.1e-08 61.2 63 46.0
BcaB04g18539 Brassica carinata HOM05D007866 ORTHO05D003871 8.1e-08 61.2 63 46.0
MELO3C003184.2 Cucumis melo HOM05D007866 ORTHO05D003871 8.1e-08 61.2 43 65.1
Thhalv10021969m.g Eutrema salsugineum HOM05D007866 ORTHO05D003871 8.1e-08 61.2 39 69.2
Nitab4.5_0000362g0160 Nicotiana tabacum HOM05D007866 ORTHO05D003871 8.1e-08 61.2 103 40.8
Oeu030552.1 Olea europaea HOM05D007866 ORTHO05D003871 8.1e-08 61.2 156 32.7
CARHR083640 Cardamine hirsuta HOM05D007866 ORTHO05D003871 1.1e-07 60.8 71 45.1
BcaC01g04222 Brassica carinata HOM05D007866 ORTHO05D003871 1.4e-07 60.5 76 43.4
FAN05G4429 Fragaria x ananassa HOM05D007866 ORTHO05D003871 1.4e-07 60.5 152 32.9
arahy.Tifrunner.gnm1.ann1.UGPP85 Arachis hypogaea HOM05D007866 ORTHO05D003871 2.4e-07 59.7 93 40.9
C03p43730 Brassica napus HOM05D007866 ORTHO05D003871 3.1e-07 59.3 76 43.4
TPR.G32547 Trifolium pratense HOM05D007866 ORTHO05D003871 3.1e-07 59.3 47 59.6
AL3G20400 Arabidopsis lyrata HOM05D007866 ORTHO05D003871 4.0e-07 58.9 39 66.7
AT3G09280 Arabidopsis thaliana HOM05D007866 ORTHO05D003871 4.0e-07 58.9 39 66.7
AL70U10030 Arabidopsis lyrata HOM05D007866 ORTHO05D003871 5.3e-07 58.5 72 45.8
CSS0047873 Camellia sinensis var. sinensis HOM05D007866 ORTHO05D003871 5.3e-07 58.5 152 30.3
PGSC0003DMG400037339 Solanum tuberosum HOM05D007866 ORTHO05D003871 5.3e-07 58.5 46 56.5
SalBow4G1352 Salvia bowleyana HOM05D007866 ORTHO05D003871 6.9e-07 58.2 115 37.4
Sopen09g006160 Solanum pennellii HOM05D007866 ORTHO05D003871 6.9e-07 58.2 139 35.3
Sp3g07650 Schrenkiella parvula HOM05D007866 ORTHO05D003871 9.0e-07 57.8 43 58.1
arahy.Tifrunner.gnm1.ann1.ABE34K Arachis hypogaea HOM05D007156 ORTHO05D003871 1.2e-06 57.4 47 61.7
Dinv35543 Davidia involucrata HOM05D007866 ORTHO05D003871 1.5e-06 57.0 129 40.3
Nitab4.5_0008116g0010 Nicotiana tabacum HOM05D007866 ORTHO05D003871 1.5e-06 57.0 88 39.8
Psat7g241400 Pisum sativum HOM05D007866 ORTHO05D003871 1.5e-06 57.0 132 35.6
Lj3g0011949 Lotus japonicus HOM05D007866 ORTHO05D003871 5.8e-06 55.1 157 29.9
MBI02_g42366_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 5.8e-06 55.1 42 59.5
MBI02_g43088_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 5.8e-06 55.1 42 59.5
Sed0027672 Sechium edule HOM05D007866 ORTHO05D003871 5.8e-06 55.1 41 61.0
PGSC0003DMG400019193 Solanum tuberosum HOM05D007866 ORTHO05D003871 5.8e-06 55.1 107 36.4
TAR633G1059 Trochodendron aralioides HOM05D007866 ORTHO05D003871 5.8e-06 55.1 168 29.8
PGSC0003DMG400013754 Solanum tuberosum HOM05D007156 ORTHO05D003871 7.6e-06 54.7 77 44.2
Cfa014479 Carpinus fangiana HOM05D007156 ORTHO05D003871 9.9e-06 54.3 68 45.6
MBI18_g20355_MAGBIO Magnolia biondii HOM05D007156 ORTHO05D003871 9.9e-06 54.3 41 61.0
Nn2g11286 Nelumbo nucifera HOM05D007156 ORTHO05D003871 9.9e-06 54.3 164 33.5
Peaxi162Scf00012g00273 Petunia axillaris HOM05D007156 ORTHO05D003871 9.9e-06 54.3 43 55.8
Rhsim05G0199600 Rhododendron simsii HOM05D007866 ORTHO05D003871 9.9e-06 54.3 110 39.1


User provided reference genes

Program Settings