Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 1.5e-133 479.6 246 100.0
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 3.1e-75 285.8 257 62.6
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 2.9e-73 279.3 254 62.2
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 9.4e-72 274.2 255 60.8
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 1.6e-71 273.5 256 59.8
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 2.7e-71 272.7 253 62.8
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 4.7e-71 271.9 242 61.2
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 4.7e-71 271.9 238 60.9
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 6.8e-70 268.1 255 60.8
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 8.8e-70 267.7 255 60.4
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 2.2e-68 263.1 253 58.9
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 4.9e-68 261.9 200 67.5
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 4.9e-68 261.9 248 59.3
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 8.3e-68 261.2 246 58.9
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 8.3e-68 261.2 239 59.0
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 1.1e-67 260.8 240 58.8
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 9.2e-67 257.7 257 59.1
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 2.7e-66 256.1 233 59.7
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 3.5e-66 255.8 223 61.4
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 5.9e-66 255.0 230 60.4
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 5.9e-66 255.0 257 56.4
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 7.7e-66 254.6 238 61.8
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 1.7e-65 253.4 242 58.3
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 2.3e-65 253.1 230 60.4
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 2.9e-65 252.7 218 60.6
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 5.0e-65 251.9 211 61.6
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 8.6e-65 251.1 254 57.5
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 1.1e-64 250.8 227 59.0
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 3.3e-64 249.2 242 56.2
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 2.0e-61 240.0 205 62.4
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 2.6e-61 239.6 206 60.7
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 4.4e-61 238.8 243 56.0
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 7.5e-61 238.0 259 56.0
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 2.9e-60 236.1 201 62.7
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 4.9e-60 235.3 225 58.2
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 8.3e-60 234.6 280 50.4
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.4e-59 233.8 244 56.6
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 4.1e-59 232.3 259 56.4
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 5.4e-59 231.9 242 55.4
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 7.0e-59 231.5 203 62.1
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 2.0e-58 229.9 225 56.4
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 2.7e-58 229.6 249 55.0
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 7.8e-58 228.0 207 59.9
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 7.8e-58 228.0 257 52.1
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 1.0e-57 227.6 253 53.0
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 1.0e-57 227.6 244 55.7
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 1.3e-57 227.3 211 57.8
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 5.0e-57 225.3 222 56.8
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 1.5e-56 223.8 257 51.0
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 4.3e-56 222.2 250 53.2
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 5.6e-56 221.9 240 54.6
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 9.5e-56 221.1 211 58.3
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 1.6e-55 220.3 252 52.4
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 2.1e-55 219.9 242 50.8
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 2.1e-55 219.9 201 58.2
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 4.7e-55 218.8 203 56.2
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 1.0e-54 217.6 247 53.0
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 1.8e-54 216.9 211 54.0
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 4.0e-54 215.7 184 62.0
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 1.5e-53 213.8 222 55.9
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 2.6e-53 213.0 281 48.0
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 7.5e-53 211.5 211 55.0
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 7.5e-53 211.5 234 52.1
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 2.9e-52 209.5 240 52.1
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 4.9e-52 208.8 289 47.8
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 6.4e-52 208.4 245 52.7
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 8.3e-52 208.0 197 56.9
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 1.4e-51 207.2 208 52.9
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 1.4e-51 207.2 255 47.8
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 4.1e-51 205.7 204 56.4
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 4.1e-51 205.7 242 52.1
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 4.1e-51 205.7 203 55.2
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 5.4e-51 205.3 239 51.0
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 5.4e-51 205.3 170 60.6
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 7.0e-51 204.9 240 51.7
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 1.6e-50 203.8 208 54.8
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.6e-50 203.8 206 54.9
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 2.7e-50 203.0 249 47.8
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 7.8e-50 201.4 207 54.1
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 1.7e-49 200.3 238 52.5
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 3.3e-48 196.1 173 59.5
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 1.2e-47 194.1 154 64.9
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 4.7e-47 192.2 187 57.8
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 6.2e-47 191.8 145 66.9
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 8.1e-47 191.4 179 56.4
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 1.8e-46 190.3 180 58.3
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 1.8e-46 190.3 180 58.3
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 3.1e-46 189.5 124 73.4
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 3.1e-46 189.5 154 64.3
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 3.1e-46 189.5 221 52.5
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 4.0e-46 189.1 209 55.0
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 4.0e-46 189.1 176 57.4
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 2.6e-45 186.4 189 57.1
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 3.4e-45 186.0 246 46.7
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 3.4e-45 186.0 189 57.1
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 9.8e-45 184.5 161 60.2
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 9.8e-45 184.5 245 45.3
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 9.8e-45 184.5 178 56.7
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 1.3e-44 184.1 152 63.8
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 2.2e-44 183.3 227 47.6
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 2.9e-44 183.0 129 70.5
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 1.1e-43 181.0 208 53.4
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 1.9e-43 180.3 206 49.0
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 2.4e-43 179.9 248 45.2
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 2.3e-41 173.3 230 47.8
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.1e-40 171.0 246 46.7
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 5.6e-40 168.7 214 47.2
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 1.8e-38 163.7 166 54.2
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 1.7e-36 157.1 144 54.9
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 1.3e-33 147.5 122 57.4
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 5.1e-33 145.6 150 52.0
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 8.6e-33 144.8 126 54.8
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 1.6e-31 140.6 113 55.8
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 2.8e-31 139.8 138 53.6
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 8.1e-31 138.3 88 68.2
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 2.4e-30 136.7 255 41.2
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 1.2e-29 134.4 172 47.1
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 1.9e-27 127.1 83 73.5
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 1.9e-27 127.1 136 48.5
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 6.6e-25 118.6 98 60.2
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 5.8e-21 105.5 256 35.5
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 3.5e-18 96.3 113 50.4
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 1.1e-14 84.7 113 44.2
TPR.G22067 Trifolium pratense HOM05D007016 ORTHO05D008847 3.1e-06 56.6 45 55.6


User provided reference genes

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