Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 1.7e-309 1065.1 511 100.0
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 8.1e-259 896.7 511 83.4
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.7e-256 889.0 511 82.0
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.1e-255 886.3 511 81.6
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.9e-253 877.9 511 81.2
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.5e-252 875.2 502 81.9
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 1.8e-250 869.0 520 79.8
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 2.6e-249 865.1 502 81.1
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 2.4e-247 858.6 501 80.4
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 4.2e-247 857.8 502 80.5
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 5.4e-247 857.4 514 78.4
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 1.6e-246 855.9 511 79.5
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 7.8e-246 853.6 501 79.8
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 1.9e-244 849.0 511 79.3
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 7.3e-244 847.0 508 79.3
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 2.8e-243 845.1 502 79.7
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 4.0e-242 841.3 510 78.8
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 3.4e-241 838.2 490 79.4
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 3.4e-241 838.2 507 78.5
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 7.6e-241 837.0 513 78.2
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 9.9e-241 836.6 502 77.9
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 1.7e-240 835.9 510 77.5
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 2.2e-240 835.5 510 77.6
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 1.1e-239 833.2 502 77.5
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.1e-239 833.2 510 77.3
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.1e-239 833.2 510 77.3
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.4e-239 830.9 510 77.5
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 7.9e-238 827.0 512 77.0
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 1.3e-237 826.2 505 77.4
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.1e-237 824.3 514 76.8
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.1e-237 824.3 522 75.7
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 6.6e-237 823.9 505 77.2
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 1.5e-236 822.8 511 75.5
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 6.2e-235 817.4 499 76.6
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 8.1e-235 817.0 507 74.0
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 1.4e-234 816.2 509 75.4
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 4.0e-234 814.7 510 73.3
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 5.8e-233 810.8 511 74.4
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 8.4e-232 807.0 492 75.2
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 1.9e-231 805.8 502 73.7
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 2.4e-231 805.4 510 72.7
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 2.4e-231 805.4 506 76.3
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 3.2e-231 805.1 540 71.3
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 7.1e-231 803.9 498 74.5
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 7.1e-231 803.9 516 74.0
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 1.2e-230 803.1 501 76.4
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 1.2e-230 803.1 510 74.7
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 1.6e-230 802.7 510 72.5
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 2.7e-230 802.0 513 75.4
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 1.8e-229 799.3 513 74.5
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 2.3e-229 798.9 492 74.2
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 5.1e-229 797.7 492 74.0
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 6.7e-229 797.3 508 73.6
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 2.5e-228 795.4 500 74.6
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 2.5e-228 795.4 503 76.1
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 5.6e-228 794.3 514 74.7
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 5.6e-228 794.3 508 73.4
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 7.4e-228 793.9 512 75.4
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 1.6e-227 792.7 501 73.1
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 1.1e-226 790.0 515 74.8
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 1.4e-226 789.6 492 74.2
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 1.4e-226 789.6 492 74.2
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 1.8e-226 789.3 492 74.0
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 1.5e-225 786.2 505 73.7
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 1.9e-223 779.2 513 73.5
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 1.0e-221 773.5 513 70.8
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 2.3e-221 772.3 502 74.3
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 5.1e-221 771.2 514 73.2
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 5.1e-221 771.2 514 73.2
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 1.3e-219 766.5 481 75.3
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 1.1e-218 763.5 506 72.1
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 2.4e-218 762.3 577 64.8
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 6.9e-218 760.8 509 72.1
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 2.6e-217 758.8 508 71.1
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 3.2e-215 751.9 516 69.8
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 3.6e-214 748.4 502 71.3
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 4.6e-214 748.0 511 69.1
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 6.1e-214 747.7 514 70.2
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 7.9e-214 747.3 496 72.6
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 6.3e-211 737.6 508 69.7
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.7e-208 729.6 503 70.2
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 2.5e-207 725.7 528 66.5
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 7.2e-207 724.2 524 66.6
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 1.6e-206 723.0 505 68.3
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 2.7e-206 722.2 462 74.7
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 7.9e-206 720.7 516 67.6
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 7.9e-206 720.7 516 67.8
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 3.7e-195 685.3 494 67.8
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 6.3e-195 684.5 517 64.2
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 5.3e-194 681.4 438 73.5
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 5.5e-191 671.4 511 66.3
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 4.0e-189 665.2 497 65.0
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 5.7e-188 661.4 510 63.3
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 5.3e-186 654.8 432 70.8
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 7.2e-183 644.4 513 61.8
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 7.2e-183 644.4 484 63.2
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 1.0e-181 640.6 519 61.5
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 3.4e-180 635.6 353 83.3
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 2.2e-179 632.9 513 62.4
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 9.1e-178 627.5 513 60.6
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 1.1e-170 604.0 426 69.0
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 3.6e-166 589.0 406 71.7
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 3.0e-120 436.4 412 53.6
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 1.5e-119 434.1 399 54.4
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 7.4e-119 431.8 257 77.0
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 1.4e-117 427.6 381 54.1
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 5.8e-116 422.2 398 51.0
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 2.4e-109 400.2 399 47.9
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.1e-77 295.0 173 79.8
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 1.3e-67 261.5 162 70.4
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 1.2e-57 228.4 120 88.3
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 8.0e-41 172.6 112 72.3
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 2.7e-36 157.5 122 64.8
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 3.5e-36 157.1 314 31.5
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.6e-25 121.7 89 62.9
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 1.5e-15 88.6 57 68.4
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 3.2e-13 80.9 74 51.4
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 3.2e-13 80.9 74 51.4
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 3.2e-13 80.9 74 51.4
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 2.4e-08 64.7 110 30.9
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 4.9e-06 57.0 58 36.2


User provided reference genes

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