Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 7.0e-74 280.8 171 100.0
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 3.9e-24 115.5 125 54.4
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 3.9e-24 115.5 125 54.4
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 8.7e-24 114.4 114 57.0
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 1.1e-23 114.0 114 57.0
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 4.3e-23 112.1 123 53.7
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 9.6e-23 110.9 123 53.7
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 9.6e-23 110.9 120 55.8
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 1.3e-22 110.5 121 53.7
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 1.6e-22 110.2 131 54.2
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 1.6e-22 110.2 118 52.5
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 1.6e-22 110.2 136 48.5
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 2.8e-22 109.4 117 53.0
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 6.2e-22 108.2 111 56.8
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 1.4e-21 107.1 121 52.1
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.8e-21 106.7 129 48.8
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 3.1e-21 105.9 117 53.8
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 4.0e-21 105.5 121 54.5
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 5.3e-21 105.1 139 51.8
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 9.0e-21 104.4 118 56.8
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 2.6e-20 102.8 127 51.2
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 3.4e-20 102.4 122 50.8
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 3.4e-20 102.4 120 49.2
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 5.8e-20 101.7 120 50.0
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 5.8e-20 101.7 133 49.6
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 5.8e-20 101.7 118 56.8
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 7.6e-20 101.3 116 49.1
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 1.0e-19 100.9 106 54.7
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 1.3e-19 100.5 110 52.7
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 2.2e-19 99.8 119 52.9
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 2.2e-19 99.8 118 55.9
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 3.8e-19 99.0 109 51.4
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 3.8e-19 99.0 109 51.4
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 4.9e-19 98.6 129 45.7
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 4.9e-19 98.6 118 50.0
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 6.5e-19 98.2 110 56.4
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 8.4e-19 97.8 141 45.4
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 8.4e-19 97.8 127 46.5
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 1.1e-18 97.4 123 48.0
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 1.1e-18 97.4 117 48.7
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 1.1e-18 97.4 107 54.2
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 1.4e-18 97.1 116 51.7
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 1.9e-18 96.7 110 50.9
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 1.9e-18 96.7 116 48.3
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 1.9e-18 96.7 113 51.3
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 2.5e-18 96.3 119 50.4
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 2.5e-18 96.3 101 58.4
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 7.1e-18 94.7 110 50.0
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 1.6e-17 93.6 116 48.3
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 3.5e-17 92.4 123 46.3
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 3.5e-17 92.4 134 45.5
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 4.6e-17 92.0 117 49.6
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 6.0e-17 91.7 133 41.4
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 7.9e-17 91.3 118 47.5
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 7.9e-17 91.3 137 47.4
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 1.3e-16 90.5 136 44.1
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 1.8e-16 90.1 120 51.7
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 5.1e-16 88.6 114 49.1
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 6.7e-16 88.2 117 46.2
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 6.7e-16 88.2 119 46.2
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 8.7e-16 87.8 133 44.4
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 8.7e-16 87.8 133 44.4
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 8.7e-16 87.8 103 53.4
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 1.5e-15 87.0 117 45.3
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 1.5e-15 87.0 110 48.2
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 1.5e-15 87.0 120 49.2
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 1.9e-15 86.7 110 48.2
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 3.3e-15 85.9 112 50.0
BraA08t35446Z Brassica rapa HOM05D000280 ORTHO05D000632 9.6e-15 84.3 111 46.8
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 9.6e-15 84.3 122 45.9
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 1.3e-14 84.0 110 47.3
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 1.3e-14 84.0 111 46.8
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 1.3e-14 84.0 118 45.8
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 2.8e-14 82.8 101 48.5
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 3.7e-14 82.4 103 48.5
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 3.7e-14 82.4 136 44.1
CARHR007770 Cardamine hirsuta HOM05D007629 ORTHO05D009511 8.2e-14 81.3 117 42.7
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 8.2e-14 81.3 123 41.5
Sp1g06620 Schrenkiella parvula HOM05D007629 ORTHO05D009511 2.4e-13 79.7 111 45.9
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 4.1e-13 79.0 76 59.2
Carub.0001s0734 Capsella rubella HOM05D007629 ORTHO05D009511 6.9e-13 78.2 111 44.1
Thhalv10009537m.g Eutrema salsugineum HOM05D007629 ORTHO05D009511 9.0e-13 77.8 112 45.5
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 2.0e-12 76.6 97 47.4
BcaB03g13359 Brassica carinata HOM05D007629 ORTHO05D009511 5.8e-12 75.1 116 42.2
A09p66070 Brassica napus HOM05D001466 ORTHO05D001452 1.3e-11 73.9 117 39.3
CDE05G3301 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 1.3e-11 73.9 117 42.7
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 1.3e-11 73.9 96 45.8
BraA09t41945Z Brassica rapa HOM05D001466 ORTHO05D001452 2.9e-11 72.8 121 39.7
BcaC07g42509 Brassica carinata HOM05D007629 ORTHO05D009511 3.8e-11 72.4 111 39.6
CDE05G1807 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 5.0e-11 72.0 119 39.5
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 2.5e-10 69.7 67 46.3
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 5.5e-10 68.6 125 39.2
CDE10G0639 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 5.5e-10 68.6 124 37.9
C08p50220 Brassica napus HOM05D001466 ORTHO05D001452 9.3e-10 67.8 116 36.2
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 4.6e-09 65.5 97 44.3
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 3.9e-08 62.4 48 56.2
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 2.2e-06 56.6 81 50.6
SEGI_12647 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 6.3e-06 55.1 115 35.7
SEGI_40980 Sequoiadendron giganteum HOM05D057847 ORTHO05D009511 6.3e-06 55.1 115 35.7


User provided reference genes

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