Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1144 Punica granatum HOM05D003074 ORTHO05D002434 5.3e-81 304.3 153 100.0
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 1.1e-20 104.0 120 50.0
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 6.8e-20 101.3 119 49.6
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 2.6e-19 99.4 131 45.8
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 2.6e-19 99.4 125 48.0
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 7.5e-19 97.8 112 49.1
Prupe.4G212400 Prunus persica HOM05D003074 ORTHO05D002434 9.8e-19 97.4 123 47.2
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 3.7e-18 95.5 125 48.8
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 4.9e-18 95.1 113 46.0
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 6.4e-18 94.7 123 45.5
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 6.4e-18 94.7 123 45.5
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 8.3e-18 94.4 123 45.5
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 1.1e-17 94.0 131 41.2
Peaxi162Scf01097g00039 Petunia axillaris HOM05D003074 ORTHO05D002434 3.2e-17 92.4 109 49.5
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 3.2e-17 92.4 128 43.0
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 3.2e-17 92.4 121 44.6
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 4.1e-17 92.0 124 45.2
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 4.1e-17 92.0 109 47.7
CiPaw.11G189000 Carya illinoinensis HOM05D003074 ORTHO05D002434 5.4e-17 91.7 139 41.0
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 9.2e-17 90.9 141 42.6
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 1.6e-16 90.1 113 47.8
Eucgr.F03465 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.6e-16 90.1 128 47.7
THA.LOC104817856 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 1.6e-16 90.1 122 44.3
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 1.6e-16 90.1 139 45.3
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 3.5e-16 89.0 123 40.7
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 3.5e-16 89.0 112 41.1
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 4.6e-16 88.6 121 43.8
Gohir.A01G079300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 6.0e-16 88.2 109 45.9
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 1.0e-15 87.4 120 44.2
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 8.6e-15 84.3 116 41.4
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 8.6e-15 84.3 110 44.5
Cc09_g09730 Coffea canephora HOM05D003074 ORTHO05D002434 1.1e-14 84.0 131 45.0
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 1.1e-14 84.0 117 46.2
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 1.5e-14 83.6 120 44.2
Eucgr.D01318 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.5e-14 83.6 119 47.1
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 1.9e-14 83.2 106 44.3
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 4.3e-14 82.0 121 41.3
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 4.3e-14 82.0 123 39.8
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 4.3e-14 82.0 123 39.8
FvH4_3g22640 Fragaria vesca HOM05D003074 ORTHO05D002434 5.6e-14 81.6 140 37.9
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 5.6e-14 81.6 123 42.3
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 7.3e-14 81.3 126 41.3
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 7.3e-14 81.3 132 44.7
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 9.5e-14 80.9 109 41.3
FAN11G2929 Fragaria x ananassa HOM05D003074 ORTHO05D002434 9.5e-14 80.9 140 37.9
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 2.1e-13 79.7 110 41.8
Glyma.08G316000 Glycine max HOM05D003074 ORTHO05D002434 2.8e-13 79.3 114 43.9
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 2.8e-13 79.3 104 43.3
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 3.6e-13 79.0 140 37.1
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 3.6e-13 79.0 140 37.1
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 3.6e-13 79.0 111 46.8
Thhalv10021814m.g Eutrema salsugineum HOM05D003074 ORTHO05D002434 4.7e-13 78.6 107 42.1
ClCG05G014310 Citrullus lanatus HOM05D003074 ORTHO05D002434 6.2e-13 78.2 115 43.5
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.1e-12 77.4 123 40.7
RcHm_v2.0_Chr5g0039411 Rosa chinensis HOM05D003074 ORTHO05D002434 1.8e-12 76.6 138 34.8
Sc16g0006080 Simmondsia chinensis HOM05D003074 ORTHO05D002434 1.8e-12 76.6 109 45.9
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 3.1e-12 75.9 115 42.6
Glyma.18G096700 Glycine max HOM05D003074 ORTHO05D002434 3.1e-12 75.9 114 44.7
Gohir.D01G066350 Gossypium hirsutum HOM05D003074 ORTHO05D002434 3.1e-12 75.9 92 47.8
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 3.1e-12 75.9 118 40.7
Sc03g0008600 Simmondsia chinensis HOM05D003074 ORTHO05D002434 3.1e-12 75.9 109 40.4
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 4.0e-12 75.5 141 36.2
Medtr3g051610 Medicago truncatula HOM05D003074 ORTHO05D002434 5.2e-12 75.1 107 45.8
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 5.2e-12 75.1 120 38.3
CARHR095990 Cardamine hirsuta HOM05D003074 ORTHO05D002434 1.2e-11 73.9 115 38.3
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 1.5e-11 73.6 127 37.0
Cc05_g13710 Coffea canephora HOM05D003074 ORTHO05D002434 1.5e-11 73.6 135 39.3
Sabra16G0289700 Salix brachista HOM05D003074 ORTHO05D002434 1.5e-11 73.6 147 39.5
EL10Ac4g07811 Beta vulgaris HOM05D003074 ORTHO05D002434 2.0e-11 73.2 114 41.2
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 2.6e-11 72.8 116 41.4
MBI18_g22612_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 2.6e-11 72.8 112 38.4
Atru.chr2.3400 Acer truncatum HOM05D003074 ORTHO05D002434 3.4e-11 72.4 144 37.5
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 3.4e-11 72.4 126 35.7
Medtr3g051530 Medicago truncatula HOM05D003074 ORTHO05D002434 3.4e-11 72.4 107 43.0
PGSC0003DMG400029820 Solanum tuberosum HOM05D003074 ORTHO05D002434 3.4e-11 72.4 110 44.5
AUR62020443 Chenopodium quinoa HOM05D003074 ORTHO05D002434 5.8e-11 71.6 114 40.4
MD11G1218800 Malus domestica HOM05D003074 ORTHO05D002434 5.8e-11 71.6 128 37.5
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 5.8e-11 71.6 126 40.5
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 7.6e-11 71.2 124 37.1
Nitab4.5_0009995g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 7.6e-11 71.2 100 47.0
AUR62020442 Chenopodium quinoa HOM05D003074 ORTHO05D002434 9.9e-11 70.9 112 37.5
Ah.04g165880 Amaranthus hybridus HOM05D003074 ORTHO05D002434 1.3e-10 70.5 115 40.9
Lj6g0015217 Lotus japonicus HOM05D003074 ORTHO05D002434 1.3e-10 70.5 108 44.4
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 1.3e-10 70.5 121 36.4
AUR62015772 Chenopodium quinoa HOM05D003074 ORTHO05D002434 1.7e-10 70.1 112 40.2
Medtr3g051570 Medicago truncatula HOM05D003074 ORTHO05D002434 1.7e-10 70.1 107 41.1
CDE05G1751 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 2.2e-10 69.7 126 33.3
Carub.0003s2029 Capsella rubella HOM05D010457 ORTHO05D002434 3.8e-10 68.9 111 36.0
Hma1.2p1_1162F.1_g262580 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 3.8e-10 68.9 113 39.8
Oeu063916.1 Olea europaea HOM05D003074 ORTHO05D002434 3.8e-10 68.9 112 41.1
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 3.8e-10 68.9 126 35.7
Nitab4.5_0000653g0010 Nicotiana tabacum HOM05D003074 ORTHO05D002434 4.9e-10 68.6 90 44.4
CiPaw.10G070500 Carya illinoinensis HOM05D003074 ORTHO05D002434 6.4e-10 68.2 136 39.0
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 6.4e-10 68.2 110 36.4
A05p28590 Brassica napus HOM05D010457 ORTHO05D002434 8.4e-10 67.8 116 34.5
Lsat_1_v5_gn_9_93960 Lactuca sativa HOM05D003074 ORTHO05D002434 8.4e-10 67.8 112 39.3
Aqoxy1G02178 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 1.1e-09 67.4 119 37.8
Ca_01715_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 1.1e-09 67.4 107 39.3
Ca_30684_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 1.1e-09 67.4 107 39.3
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 1.1e-09 67.4 112 34.8
Medtr3g051510 Medicago truncatula HOM05D003074 ORTHO05D002434 1.1e-09 67.4 107 42.1
ClCG03G004770 Citrullus lanatus HOM05D003074 ORTHO05D002434 1.4e-09 67.0 121 36.4
Hma1.2p1_1091F.1_g255850 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.4e-09 67.0 114 40.4
BcaC05g28318 Brassica carinata HOM05D010457 ORTHO05D002434 1.9e-09 66.6 116 32.8
C05p44000 Brassica napus HOM05D010457 ORTHO05D002434 1.9e-09 66.6 116 32.8
BolC5t33118H Brassica oleracea HOM05D010457 ORTHO05D002434 1.9e-09 66.6 116 32.8
Nitab4.5_0009995g0020 Nicotiana tabacum HOM05D003074 ORTHO05D002434 1.9e-09 66.6 91 42.9
TPR.G16595 Trifolium pratense HOM05D003074 ORTHO05D002434 1.9e-09 66.6 112 42.9
ECA246G0494 Erigeron canadensis HOM05D003074 ORTHO05D002434 2.4e-09 66.2 109 35.8
Phvul.006G043100 Phaseolus vulgaris HOM05D003074 ORTHO05D002434 2.4e-09 66.2 107 42.1
Atru.chr2.3399 Acer truncatum HOM05D003074 ORTHO05D002434 3.2e-09 65.9 138 34.8
Aa31LG8G7150 Aethionema arabicum HOM05D010457 ORTHO05D002434 3.2e-09 65.9 112 38.4
Aqoxy1G02175 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 3.2e-09 65.9 114 36.0
LjContig00272g0022666 Lotus japonicus HOM05D003074 ORTHO05D002434 3.2e-09 65.9 106 40.6
Lalb_Chr15g0087561 Lupinus albus HOM05D008677 ORTHO05D002434 3.2e-09 65.9 118 38.1
CDE05G3459 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 4.1e-09 65.5 114 31.6
Eucgr.E04063 Eucalyptus grandis HOM05D003074 ORTHO05D002434 4.1e-09 65.5 114 35.1
Solyc12g005000.1 Solanum lycopersicum HOM05D003074 ORTHO05D002434 4.1e-09 65.5 103 42.7
ATR0752G060 Amborella trichopoda HOM05D003074 ORTHO05D002434 5.4e-09 65.1 107 39.3
BraA05t21736Z Brassica rapa HOM05D010457 ORTHO05D002434 5.4e-09 65.1 116 32.8
PGSC0003DMG400032292 Solanum tuberosum HOM05D003074 ORTHO05D002434 5.4e-09 65.1 107 43.9
BcaB06g26099 Brassica carinata HOM05D010457 ORTHO05D002434 9.2e-09 64.3 120 33.3
Lalb_Chr15g0081141 Lupinus albus HOM05D003074 ORTHO05D002434 9.2e-09 64.3 57 57.9
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 9.2e-09 64.3 124 33.9
PGSC0003DMG400031876 Solanum tuberosum HOM05D003074 ORTHO05D002434 9.2e-09 64.3 107 43.9
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 1.2e-08 63.9 128 37.5
Glyma.02G290900 Glycine max HOM05D003074 ORTHO05D002434 1.6e-08 63.5 106 39.6
Potri.001G435400 Populus trichocarpa HOM05D003074 ORTHO05D002434 1.6e-08 63.5 112 40.2
Sp3g18370 Schrenkiella parvula HOM05D010457 ORTHO05D002434 1.6e-08 63.5 120 32.5
Cc09_g01730 Coffea canephora HOM05D003074 ORTHO05D002434 2.7e-08 62.8 125 36.0
Phvul.006G150100 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 4.6e-08 62.0 125 34.4
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 4.6e-08 62.0 115 37.4
MELO3C002460.2 Cucumis melo HOM05D003074 ORTHO05D002434 6.0e-08 61.6 121 33.1
Lalb_Chr18g0056321 Lupinus albus HOM05D008677 ORTHO05D002434 6.0e-08 61.6 118 39.0
TWI38G1232 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 6.0e-08 61.6 129 34.9
DCAR_004216 Daucus carota HOM05D003074 ORTHO05D002434 7.8e-08 61.2 120 39.2
TAR627G0593 Trochodendron aralioides HOM05D003074 ORTHO05D002434 7.8e-08 61.2 54 55.6
Eucgr.E04065 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.0e-07 60.8 120 35.8
Manes.17G038600 Manihot esculenta HOM05D003074 ORTHO05D002434 1.0e-07 60.8 122 36.1
Aqoxy1G02177 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 1.3e-07 60.5 116 37.1
Eucgr.E04061 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.3e-07 60.5 114 34.2
Phvul.008G267000 Phaseolus vulgaris HOM05D003074 ORTHO05D002434 1.3e-07 60.5 103 40.8
Potri.011G003100 Populus trichocarpa HOM05D003074 ORTHO05D002434 1.7e-07 60.1 126 32.5
AUR62015773 Chenopodium quinoa HOM05D003074 ORTHO05D002434 2.3e-07 59.7 86 45.3
Migut.H01829 Erythranthe guttata HOM05D003074 ORTHO05D002434 2.3e-07 59.7 129 35.7
Glyma.17G014400 Glycine max HOM05D008677 ORTHO05D002434 2.3e-07 59.7 119 34.5
Medtr5g092710 Medicago truncatula HOM05D003074 ORTHO05D002434 2.3e-07 59.7 102 35.3
Sabra11G0125300 Salix brachista HOM05D003074 ORTHO05D002434 2.3e-07 59.7 111 38.7
Sc17g0007340 Simmondsia chinensis HOM05D003074 ORTHO05D002434 2.3e-07 59.7 114 35.1
AUR62015774 Chenopodium quinoa HOM05D003074 ORTHO05D002434 3.0e-07 59.3 115 37.4
AUR62020444 Chenopodium quinoa HOM05D003074 ORTHO05D002434 3.0e-07 59.3 115 37.4
Lalb_Chr04g0248431 Lupinus albus HOM05D003074 ORTHO05D002434 3.0e-07 59.3 109 39.4
MBI02_g07158_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 3.0e-07 59.3 57 50.9
CDE02G3016 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 3.9e-07 58.9 119 39.5
MELO3C025367.2 Cucumis melo HOM05D003074 ORTHO05D002434 3.9e-07 58.9 111 36.9
DCAR_008152 Daucus carota HOM05D003074 ORTHO05D002434 3.9e-07 58.9 72 44.4
Lj4g0005888 Lotus japonicus HOM05D008677 ORTHO05D002434 3.9e-07 58.9 131 29.8
VMungo1215G0276 Vigna mungo HOM05D008677 ORTHO05D002434 3.9e-07 58.9 117 32.5
Glyma.15G107300 Glycine max HOM05D008677 ORTHO05D002434 5.1e-07 58.5 130 36.9
ECA240G4169 Erigeron canadensis HOM05D003074 ORTHO05D002434 6.6e-07 58.2 101 36.6
VMungo0540G1774 Vigna mungo HOM05D008677 ORTHO05D002434 6.6e-07 58.2 134 36.6
C01p43750 Brassica napus HOM05D010457 ORTHO05D002434 8.6e-07 57.8 112 31.2
BolC1t04334H Brassica oleracea HOM05D010457 ORTHO05D002434 8.6e-07 57.8 112 31.2
Aa31LG6G3910 Aethionema arabicum HOM05D003074 ORTHO05D002434 1.1e-06 57.4 123 34.1
BcaC09g48988 Brassica carinata HOM05D010457 ORTHO05D002434 1.1e-06 57.4 112 31.2
Dinv13888 Davidia involucrata HOM05D003074 ORTHO05D002434 1.1e-06 57.4 94 39.4
arahy.Tifrunner.gnm1.ann1.22WBGR Arachis hypogaea HOM05D003074 ORTHO05D002434 1.5e-06 57.0 56 53.6
TPR.G34803 Trifolium pratense HOM05D003074 ORTHO05D002434 1.5e-06 57.0 56 58.9
Atru.chr10.2213 Acer truncatum HOM05D003074 ORTHO05D002434 1.9e-06 56.6 65 43.1
Eucgr.E04062 Eucalyptus grandis HOM05D003074 ORTHO05D002434 2.5e-06 56.2 117 35.0
Glyma.07G259800 Glycine max HOM05D008677 ORTHO05D002434 2.5e-06 56.2 126 34.1
Zm00001eb151010 Zea mays HOM05D016178 ORTHO05D020926 2.5e-06 56.2 112 40.2
Eucgr.E04066 Eucalyptus grandis HOM05D003074 ORTHO05D002434 3.3e-06 55.8 113 34.5
Eucgr.E04064 Eucalyptus grandis HOM05D003074 ORTHO05D002434 4.3e-06 55.5 116 32.8
Potri.011G139400 Populus trichocarpa HOM05D003074 ORTHO05D002434 4.3e-06 55.5 111 40.5
Rhsim13G0146000 Rhododendron simsii HOM05D002761 ORTHO05D003351 4.3e-06 55.5 118 36.4
RhsimUnG0109700 Rhododendron simsii HOM05D003074 ORTHO05D002434 4.3e-06 55.5 118 36.4
Sabra11G0125400 Salix brachista HOM05D003074 ORTHO05D002434 4.3e-06 55.5 68 45.6
MD10G1320500 Malus domestica HOM05D003074 ORTHO05D002434 5.6e-06 55.1 140 32.1
BcaB04g20658 Brassica carinata HOM05D010457 ORTHO05D002434 7.3e-06 54.7 115 28.7
C03p51080 Brassica napus HOM05D010457 ORTHO05D002434 7.3e-06 54.7 116 31.9
Lsat_1_v5_gn_5_6000 Lactuca sativa HOM05D003074 ORTHO05D002434 7.3e-06 54.7 58 48.3
THA.LOC104812967 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 7.3e-06 54.7 123 34.1
unitig_85.g27325 Utricularia gibba HOM05D003074 ORTHO05D002434 7.3e-06 54.7 104 31.7
arahy.Tifrunner.gnm1.ann1.B0CFPV Arachis hypogaea HOM05D003074 ORTHO05D002434 9.6e-06 54.3 106 36.8


User provided reference genes

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