Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 1.3e-249 865.9 425 100.0
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 1.3e-249 865.9 425 100.0
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 9.0e-171 604.0 418 70.3
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 5.5e-168 594.7 434 67.5
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 1.6e-167 593.2 426 67.1
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 1.6e-167 593.2 434 67.7
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 2.1e-167 592.8 433 67.2
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 1.8e-166 589.7 426 68.1
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 3.3e-165 585.5 433 67.0
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 1.6e-164 583.2 427 67.2
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 2.8e-164 582.4 432 66.9
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 4.8e-164 581.6 426 68.8
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 8.2e-164 580.9 427 67.7
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 1.1e-163 580.5 426 69.0
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 1.1e-163 580.5 434 65.4
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 1.5e-162 576.6 422 69.4
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 2.6e-162 575.9 431 66.6
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 2.6e-162 575.9 427 66.5
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 8.4e-161 570.9 423 66.2
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 1.4e-160 570.1 437 63.2
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 1.9e-160 569.7 438 63.2
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 9.3e-160 567.4 428 64.3
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 1.2e-159 567.0 435 64.8
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 6.0e-159 564.7 423 66.4
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 6.0e-159 564.7 436 63.8
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 1.3e-158 563.5 413 65.6
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 1.1e-157 560.5 428 65.2
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 3.3e-157 558.9 422 64.7
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 4.3e-157 558.5 429 62.5
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 5.7e-157 558.1 429 62.5
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 7.4e-157 557.8 435 63.7
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 6.3e-156 554.7 414 62.8
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 1.1e-155 553.9 447 63.5
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 1.8e-155 553.1 426 63.6
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 4.1e-155 552.0 435 62.3
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 6.9e-155 551.2 389 69.4
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.3e-153 547.0 407 63.1
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 3.8e-153 545.4 435 65.1
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 1.1e-152 543.9 404 65.3
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 2.5e-152 542.7 437 61.8
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 2.5e-152 542.7 437 62.0
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 7.2e-152 541.2 418 65.1
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 1.4e-150 537.0 451 61.2
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 1.8e-150 536.6 418 63.6
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 8.8e-150 534.3 448 63.2
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 4.3e-149 531.9 434 63.1
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 2.2e-148 529.6 424 62.5
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 4.8e-148 528.5 436 61.7
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 8.2e-148 527.7 417 63.5
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 8.2e-148 527.7 417 63.5
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 1.1e-147 527.3 417 62.8
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 5.3e-147 525.0 438 62.1
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 9.1e-147 524.2 433 61.7
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 1.2e-146 523.9 387 67.4
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 3.4e-146 522.3 434 62.0
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 1.3e-145 520.4 438 61.9
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 1.7e-145 520.0 434 62.0
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 1.7e-145 520.0 415 63.6
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 2.5e-144 516.2 421 60.6
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 2.1e-143 513.1 523 53.3
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 9.7e-141 504.2 422 61.4
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 3.7e-140 502.3 420 60.0
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 8.2e-140 501.1 420 60.5
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 1.4e-139 500.4 432 58.8
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 1.8e-139 500.0 429 58.3
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 4.5e-138 495.4 435 59.1
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 6.1e-135 485.0 430 56.5
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 3.9e-134 482.3 425 57.2
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 8.8e-134 481.1 431 56.6
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 1.1e-133 480.7 358 67.0
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 1.4e-131 473.8 420 57.4
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 2.4e-131 473.0 415 56.9
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 1.6e-130 470.3 359 64.9
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 1.7e-129 466.8 421 58.2
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 7.2e-128 461.5 421 56.3
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 3.6e-127 459.1 412 56.1
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 4.7e-127 458.8 421 56.5
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 4.7e-127 458.8 421 56.5
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 8.0e-127 458.0 355 62.0
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 1.0e-126 457.6 423 56.5
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 3.0e-126 456.1 420 56.0
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 4.4e-125 452.2 408 56.4
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 4.4e-125 452.2 377 60.5
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 1.4e-123 447.2 427 54.8
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 2.0e-122 443.4 425 54.6
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 1.9e-120 436.8 427 53.9
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 4.2e-120 435.6 370 60.0
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 5.5e-120 435.3 405 54.8
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 4.7e-119 432.2 413 54.7
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 5.7e-117 425.2 658 39.2
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 1.4e-115 420.6 435 51.5
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 6.6e-113 411.8 432 51.6
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 1.4e-110 404.1 307 67.1
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 5.7e-109 398.7 306 65.4
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 5.4e-107 392.1 425 48.9
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 4.9e-84 315.8 295 56.9
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 1.9e-75 287.3 458 38.0
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 2.6e-69 266.9 464 37.3
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 4.9e-68 262.7 239 57.7
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 1.9e-64 250.8 200 62.5
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 6.2e-63 245.7 276 51.4
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 1.9e-56 224.2 208 53.4
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 2.7e-50 203.8 211 51.2
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 3.7e-47 193.4 186 52.7
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.0e-45 187.6 163 58.3
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 3.3e-40 170.2 180 50.0
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 2.8e-39 167.2 123 64.2
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 6.3e-39 166.0 113 68.1
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 8.2e-39 165.6 246 40.7
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 1.5e-24 118.2 113 55.8
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 1.7e-15 88.2 100 44.0
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 9.1e-14 82.4 89 48.3
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 1.1e-11 75.5 103 39.8
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 7.2e-11 72.8 203 28.6
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 1.6e-10 71.6 98 43.9
ATR0787G039 Amborella trichopoda HOM05D006857 ORTHO05D008679 1.4e-06 58.5 44 61.4
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 1.4e-06 58.5 50 58.0
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 5.3e-06 56.6 222 27.5


User provided reference genes

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