Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 1.2e-142 510.0 293 100.0
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 4.3e-63 245.7 292 59.6
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 9.5e-63 244.6 290 60.0
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 4.7e-62 242.3 284 51.8
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 9.2e-58 228.0 292 50.3
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 2.7e-57 226.5 298 57.4
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 7.8e-57 224.9 292 49.0
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 1.3e-56 224.2 292 51.4
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 1.1e-53 214.5 297 56.6
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.1e-50 204.5 300 47.7
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 5.4e-50 202.2 299 45.8
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 9.3e-50 201.4 262 50.8
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 7.8e-49 198.4 263 58.2
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 3.0e-48 196.4 297 46.5
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 8.7e-48 194.9 281 47.3
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 8.7e-48 194.9 297 46.1
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 1.1e-47 194.5 295 51.2
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 1.1e-47 194.5 303 45.5
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 3.3e-47 193.0 294 50.0
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 3.3e-47 193.0 250 50.0
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 2.1e-46 190.3 296 44.3
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 3.6e-46 189.5 293 44.4
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 2.0e-44 183.7 338 41.7
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 2.6e-44 183.3 342 40.4
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 7.6e-44 181.8 342 42.1
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 8.4e-43 178.3 274 46.4
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 1.4e-42 177.6 271 45.0
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 2.4e-42 176.8 273 46.5
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.6e-41 174.1 274 44.9
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 1.6e-41 174.1 262 49.6
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 2.7e-41 173.3 272 43.4
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 2.3e-40 170.2 301 45.5
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 3.0e-40 169.9 275 50.5
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 3.0e-40 169.9 284 50.4
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 5.1e-40 169.1 250 47.2
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 6.7e-40 168.7 250 47.2
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 8.7e-40 168.3 258 50.4
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 8.7e-40 168.3 258 50.4
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.1e-39 167.9 258 50.4
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 2.5e-39 166.8 285 45.3
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 2.5e-39 166.8 153 62.1
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 7.4e-39 165.2 254 45.3
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 9.6e-39 164.9 299 43.5
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 2.1e-38 163.7 282 40.8
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 6.2e-38 162.2 296 41.6
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 1.4e-37 161.0 322 39.4
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 1.4e-37 161.0 315 40.0
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 1.8e-37 160.6 287 46.0
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 4.0e-37 159.5 296 41.2
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 6.9e-37 158.7 301 40.5
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 1.5e-36 157.5 305 43.3
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 1.5e-36 157.5 297 41.8
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 2.0e-36 157.1 269 42.8
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 3.4e-36 156.4 280 42.9
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 7.6e-36 155.2 293 43.0
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 1.0e-35 154.8 269 46.1
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 1.4e-34 151.0 282 41.8
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 2.5e-34 150.2 269 45.7
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 4.2e-34 149.4 294 45.2
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 5.5e-34 149.1 275 40.4
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 7.1e-34 148.7 245 42.4
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 9.3e-34 148.3 288 40.3
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 9.3e-34 148.3 288 40.3
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 1.6e-33 147.5 294 39.8
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 1.6e-33 147.5 294 39.8
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 1.6e-33 147.5 294 39.8
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 2.7e-33 146.7 150 57.3
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 2.7e-33 146.7 147 57.1
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 1.3e-32 144.4 159 52.2
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.8e-32 144.1 214 47.2
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 2.3e-32 143.7 260 43.8
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 3.0e-32 143.3 293 39.2
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 3.9e-32 142.9 298 37.6
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 1.1e-31 141.4 152 55.9
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 1.5e-31 141.0 294 38.8
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 2.5e-31 140.2 322 37.6
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 4.3e-31 139.4 293 38.9
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 7.4e-31 138.7 289 41.5
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 2.1e-30 137.1 151 58.3
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.7e-30 136.3 157 54.1
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 3.7e-30 136.3 299 37.1
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 1.4e-29 134.4 280 39.6
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 1.8e-29 134.0 266 42.9
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 4.0e-29 132.9 292 45.9
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 4.0e-29 132.9 141 57.4
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 1.2e-28 131.3 306 42.2
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 2.0e-28 130.6 297 44.4
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 3.4e-28 129.8 210 53.3
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 7.6e-28 128.6 309 36.6
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.0e-27 128.3 152 55.3
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 6.5e-27 125.6 299 43.1
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 4.2e-26 122.9 223 48.9
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 4.2e-26 122.9 286 33.9
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 4.2e-26 122.9 258 43.4
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 9.3e-26 121.7 203 41.9
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 1.2e-25 121.3 252 42.9
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 7.9e-25 118.6 184 52.7
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 1.0e-24 118.2 197 42.6
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 1.3e-24 117.9 298 40.3
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 1.3e-24 117.9 289 33.9
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 8.7e-24 115.2 93 67.7
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 1.9e-23 114.0 224 46.4
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 9.7e-23 111.7 74 79.7
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 2.8e-22 110.2 261 40.6
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 3.7e-22 109.8 262 41.2
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 4.8e-22 109.4 258 35.7
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 3.1e-21 106.7 258 34.9
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 6.9e-21 105.5 215 39.5
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 4.5e-20 102.8 157 47.1
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 1.0e-19 101.7 170 38.8
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 8.5e-19 98.6 210 39.5
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 3.6e-17 93.2 260 33.8
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.4e-16 91.3 230 34.8
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 9.7e-15 85.1 185 39.5
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 8.2e-14 82.0 87 56.3
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 8.2e-14 82.0 52 75.0
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 7.7e-12 75.5 163 37.4
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 3.2e-10 70.1 61 62.3
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 3.2e-10 70.1 42 78.6
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 1.7e-06 57.8 35 74.3
AagrBONN_evm.TU.Sc2ySwM_228.1662 Anthoceros agrestis HOM05D015270 ORTHO05D016504 8.2e-06 55.5 301 28.6


User provided reference genes

Program Settings