Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 0.0e+00 1113.6 660 100.0
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 1.0e-176 624.4 697 65.3
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 3.8e-176 622.5 681 57.0
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 7.2e-175 618.2 692 64.0
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 5.1e-173 612.1 680 57.2
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 7.4e-172 608.2 677 57.0
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 9.7e-172 607.8 687 63.8
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 2.8e-171 606.3 683 57.5
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 4.8e-171 605.5 668 56.1
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 6.3e-171 605.1 662 58.8
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 1.4e-170 604.0 671 64.8
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 1.4e-170 604.0 674 61.1
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 2.4e-170 603.2 687 63.5
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 3.4e-169 599.4 681 55.2
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 1.0e-168 597.8 681 54.8
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 3.8e-168 595.9 684 63.0
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 2.5e-167 593.2 667 56.4
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 3.2e-167 592.8 670 61.2
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 5.5e-167 592.0 665 55.9
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 2.7e-166 589.7 666 55.1
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 1.0e-165 587.8 692 51.6
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 2.2e-163 580.1 676 56.2
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 4.8e-163 578.9 684 53.8
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 1.4e-162 577.4 515 60.4
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 1.2e-161 574.3 666 52.6
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 2.6e-161 573.2 670 54.0
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 2.6e-161 573.2 685 62.9
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 4.5e-161 572.4 686 56.0
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 1.3e-160 570.9 663 57.2
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 2.2e-160 570.1 688 55.2
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 2.9e-160 569.7 656 54.4
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 2.9e-160 569.7 686 54.4
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 6.5e-160 568.5 671 53.2
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 1.4e-159 567.4 523 60.4
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 4.2e-159 565.8 654 59.5
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 9.4e-159 564.7 669 58.3
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 3.6e-158 562.8 662 55.1
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 3.6e-158 562.8 669 52.6
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 4.7e-158 562.4 678 51.9
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 7.9e-158 561.6 693 56.6
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 1.4e-157 560.8 666 53.8
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 5.2e-157 558.9 667 52.9
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 2.0e-156 557.0 692 54.5
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 2.0e-156 557.0 689 55.7
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 3.3e-156 556.2 693 54.4
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 3.3e-156 556.2 660 59.7
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 5.7e-156 555.4 651 53.0
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 5.7e-156 555.4 682 56.0
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 7.4e-156 555.1 672 51.5
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 7.4e-156 555.1 739 49.1
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 9.7e-156 554.7 670 56.0
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 2.2e-155 553.5 657 61.5
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 3.7e-155 552.7 678 48.7
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 6.3e-155 552.0 674 51.2
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 8.2e-155 551.6 678 54.4
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 2.4e-154 550.1 698 59.5
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 2.0e-153 547.0 663 51.1
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.0e-153 547.0 524 59.2
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 2.0e-153 547.0 657 61.0
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 3.5e-153 546.2 696 53.3
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 4.5e-153 545.8 524 59.0
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 5.9e-153 545.4 673 50.7
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.9e-152 543.1 521 59.3
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 3.2e-151 539.7 660 51.1
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 5.5e-151 538.9 669 50.5
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 5.5e-151 538.9 521 57.2
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 3.6e-150 536.2 507 58.6
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 2.3e-149 533.5 674 54.9
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 2.3e-149 533.5 652 54.0
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 9.7e-148 528.1 713 55.1
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 2.8e-147 526.6 658 54.3
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 3.1e-146 523.1 714 51.0
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 6.5e-144 515.4 530 55.3
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 8.5e-144 515.0 702 51.4
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 4.4e-140 502.7 521 54.3
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 7.0e-138 495.4 577 52.3
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 7.0e-138 495.4 529 53.9
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 1.6e-137 494.2 517 54.4
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 3.8e-136 489.6 516 53.7
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 1.9e-135 487.3 662 47.7
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 7.2e-135 485.3 681 47.6
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 1.2e-134 484.6 672 45.5
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 1.0e-133 481.5 528 52.8
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 2.0e-132 477.2 575 58.4
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 4.9e-131 472.6 521 53.7
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 4.9e-131 472.6 521 53.7
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 2.4e-130 470.3 680 49.6
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 3.1e-130 469.9 503 51.7
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 1.1e-127 461.5 521 50.5
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 1.5e-127 461.1 505 53.1
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 1.6e-126 457.6 672 48.4
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 4.4e-124 449.5 580 57.6
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 5.8e-124 449.1 514 48.6
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 7.5e-124 448.7 576 61.3
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 4.9e-115 419.5 453 51.2
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 5.4e-114 416.0 429 53.6
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.0e-113 414.1 518 49.4
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 5.0e-112 409.5 696 41.7
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 1.1e-101 375.2 371 55.3
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 1.9e-98 364.4 371 53.1
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 3.6e-94 350.1 406 51.2
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 1.7e-91 341.3 647 43.6
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 7.8e-89 332.4 528 40.3
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 1.6e-86 324.7 633 42.5
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 2.3e-72 277.7 309 53.1
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 1.2e-65 255.4 521 36.1
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 9.0e-61 239.2 222 58.1
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 1.8e-53 214.9 480 34.0
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 4.5e-44 183.7 230 43.0
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 5.9e-36 156.8 339 32.7
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 1.9e-34 151.8 533 28.9
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 1.6e-28 132.1 153 51.6
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 7.8e-12 76.6 54 64.8
Medtr7g075450 Medicago truncatula HOM05D006822 ORTHO05D008884 6.6e-11 73.6 105 42.9
CsaV3_4G032230 Cucumis sativus L. HOM05D006822 ORTHO05D008884 1.4e-08 65.9 113 39.8
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 9.8e-07 59.7 185 50.3
Aqoxy2G02051 Aquilegia oxysepala HOM05D004629 ORTHO05D004559 6.4e-06 57.0 109 37.6


User provided reference genes

Program Settings