Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G1000 Punica granatum HOM05D006069 ORTHO05D008101 9.8e-51 203.4 118 100.0
Cfa013967 Carpinus fangiana HOM05D006069 ORTHO05D008101 3.6e-37 158.3 102 78.4
Haze_22649 Corylus avellana HOM05D006069 ORTHO05D008101 8.1e-37 157.1 102 77.5
Haze_22650 Corylus avellana HOM05D003905 ORTHO05D005329 1.1e-36 156.8 102 77.5
CiPaw.07G148400 Carya illinoinensis HOM05D006069 ORTHO05D008101 5.2e-36 154.5 100 75.0
QL02p011928 Quercus lobata HOM05D006069 ORTHO05D008101 6.8e-36 154.1 100 75.0
QL11p034297 Quercus lobata HOM05D006069 ORTHO05D008101 6.8e-36 154.1 100 75.0
Eucgr.H00971 Eucalyptus grandis HOM05D006069 ORTHO05D008101 8.9e-36 153.7 103 75.7
Sabra02G0016400 Salix brachista HOM05D006069 ORTHO05D008101 1.2e-35 153.3 100 75.0
Cfa013969 Carpinus fangiana HOM05D006069 ORTHO05D008101 2.6e-35 152.1 102 75.5
Thecc.08G047500 Theobroma cacao HOM05D006069 ORTHO05D008101 3.4e-35 151.8 105 70.5
Potri.002G020200 Populus trichocarpa HOM05D006069 ORTHO05D008101 4.4e-35 151.4 101 73.3
COL.COLO4_26120 Corchorus olitorius HOM05D006069 ORTHO05D008101 7.6e-35 150.6 104 70.2
Ciclev10002907m.g Citrus clementina HOM05D006069 ORTHO05D008101 2.2e-34 149.1 103 70.9
RcHm_v2.0_Chr6g0303091 Rosa chinensis HOM05D006069 ORTHO05D008101 2.9e-34 148.7 106 74.5
TAR625G1525 Trochodendron aralioides HOM05D006069 ORTHO05D008101 2.9e-34 148.7 100 70.0
Gohir.D05G258200 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.8e-34 148.3 105 67.6
Gorai.009G269500 Gossypium raimondii HOM05D006069 ORTHO05D008101 3.8e-34 148.3 105 67.6
Potri.005G241200 Populus trichocarpa HOM05D006069 ORTHO05D008101 3.8e-34 148.3 100 72.0
Oeu014170.1 Olea europaea HOM05D006069 ORTHO05D008101 4.9e-34 147.9 100 71.0
Duzib041G0459 Durio zibethinus HOM05D006069 ORTHO05D008101 6.4e-34 147.5 105 67.6
Oeu061972.1 Olea europaea HOM05D006069 ORTHO05D008101 6.4e-34 147.5 98 70.4
Gohir.A05G256400 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.1e-33 146.7 105 66.7
Cpa.g.c46170 Carica papaya HOM05D006069 ORTHO05D008101 1.9e-33 146.0 100 68.0
Cpa.g.sc64.165 Carica papaya HOM05D006069 ORTHO05D008101 1.9e-33 146.0 100 68.0
Sabra05G0186700 Salix brachista HOM05D006069 ORTHO05D008101 4.1e-33 144.8 100 72.0
TWI56G0900 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 5.4e-33 144.4 100 68.0
TWI12G0868 Tripterygium wilfordii HOM05D006069 ORTHO05D008101 7.1e-33 144.1 100 68.0
Duzib093G2212 Durio zibethinus HOM05D006069 ORTHO05D008101 2.1e-32 142.5 105 67.6
VMungo0647G0980 Vigna mungo HOM05D006069 ORTHO05D008101 2.7e-32 142.1 107 67.3
Phvul.001G005300 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 3.5e-32 141.7 107 67.3
Atru.chr13.270 Acer truncatum HOM05D006069 ORTHO05D008101 6.0e-32 141.0 104 66.3
Hma1.2p1_0733F.1_g210300 Hydrangea macrophylla HOM05D006069 ORTHO05D008101 6.0e-32 141.0 99 68.7
FvH4_2g38290 Fragaria vesca HOM05D006069 ORTHO05D008101 1.0e-31 140.2 103 72.8
Nn6g32021 Nelumbo nucifera HOM05D006069 ORTHO05D008101 1.3e-31 139.8 102 68.6
Sc02g0008640 Simmondsia chinensis HOM05D006069 ORTHO05D008101 1.7e-31 139.4 102 69.6
Oeu054481.1 Olea europaea HOM05D006069 ORTHO05D008101 3.9e-31 138.3 100 72.0
Manes.18G012400 Manihot esculenta HOM05D006069 ORTHO05D008101 5.1e-31 137.9 100 69.0
SGA_v2.0_scaffold11G05937 Striga asiatica HOM05D006069 ORTHO05D008101 6.6e-31 137.5 100 67.0
FAN15G3329 Fragaria x ananassa HOM05D006069 ORTHO05D008101 8.6e-31 137.1 103 70.9
Glyma.14G219800 Glycine max HOM05D006069 ORTHO05D008101 8.6e-31 137.1 105 65.7
SalBow7G4587 Salvia bowleyana HOM05D006069 ORTHO05D008101 8.6e-31 137.1 99 67.7
SalBow8G0098 Salvia bowleyana HOM05D006069 ORTHO05D008101 8.6e-31 137.1 103 65.0
unitig_82.g27107 Utricularia gibba HOM05D006069 ORTHO05D008101 8.6e-31 137.1 99 67.7
Gohir.D06G005300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 1.1e-30 136.7 107 64.5
Gorai.010G002500 Gossypium raimondii HOM05D006069 ORTHO05D008101 1.1e-30 136.7 107 64.5
Dinv31861 Davidia involucrata HOM05D006069 ORTHO05D000038 1.5e-30 136.3 102 64.7
FAN27G3260 Fragaria x ananassa HOM05D006069 ORTHO05D008101 1.5e-30 136.3 103 70.9
Manes.05G145900 Manihot esculenta HOM05D006069 ORTHO05D008101 1.9e-30 136.0 94 71.3
Gohir.A06G002300 Gossypium hirsutum HOM05D006069 ORTHO05D008101 3.3e-30 135.2 107 63.6
Prupe.1G363800 Prunus persica HOM05D006069 ORTHO05D008101 3.3e-30 135.2 103 67.0
Ca_00837_v3 Cicer arietinum L. HOM05D006069 ORTHO05D008101 7.3e-30 134.0 103 64.1
CANSAT25G1864 Cannabis sativa HOM05D006069 ORTHO05D008101 2.1e-29 132.5 106 66.0
Nitab4.5_0000569g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 3.6e-29 131.7 105 61.9
Sc15g0004900 Simmondsia chinensis HOM05D006069 ORTHO05D008101 6.2e-29 131.0 102 64.7
Duzib116G0547 Durio zibethinus HOM05D006069 ORTHO05D008101 8.1e-29 130.6 97 64.9
MD08G1011100 Malus domestica HOM05D006069 ORTHO05D008101 8.1e-29 130.6 105 66.7
Medtr3g113620 Medicago truncatula HOM05D006069 ORTHO05D008101 1.1e-28 130.2 101 65.3
Migut.N03168 Erythranthe guttata HOM05D006069 ORTHO05D008101 2.4e-28 129.0 99 62.6
Lalb_Chr19g0131451 Lupinus albus HOM05D006069 ORTHO05D008101 2.4e-28 129.0 103 65.0
Nitab4.5_0007809g0010 Nicotiana tabacum HOM05D006069 ORTHO05D008101 5.2e-28 127.9 105 61.0
Lsat_1_v5_gn_8_29900 Lactuca sativa HOM05D006069 ORTHO05D008101 6.9e-28 127.5 103 66.0
MD15G1011100 Malus domestica HOM05D006069 ORTHO05D008101 6.9e-28 127.5 104 66.3
EL10Ac1g02174 Beta vulgaris HOM05D006069 ORTHO05D008101 8.9e-28 127.1 101 64.4
CSS0019530 Camellia sinensis var. sinensis HOM05D006069 ORTHO05D008101 8.9e-28 127.1 101 61.4
Solyc04g078060.1 Solanum lycopersicum HOM05D006069 ORTHO05D008101 8.9e-28 127.1 111 57.7
Sopen04g031650 Solanum pennellii HOM05D006069 ORTHO05D008101 1.2e-27 126.7 111 57.7
Nitab4.5_0000934g0080 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.5e-27 126.3 116 55.2
arahy.Tifrunner.gnm1.ann1.LEZM1J Arachis hypogaea HOM05D006069 ORTHO05D008101 2.6e-27 125.6 109 59.6
HanXRQChr13g0387231 Helianthus annuus HOM05D006069 ORTHO05D008101 2.6e-27 125.6 103 63.1
Migut.C00852 Erythranthe guttata HOM05D006069 ORTHO05D008101 3.4e-27 125.2 94 64.9
PGSC0003DMG400021511 Solanum tuberosum HOM05D006069 ORTHO05D008101 3.4e-27 125.2 111 56.8
Lalb_Chr01g0008621 Lupinus albus HOM05D006069 ORTHO05D008101 5.8e-27 124.4 108 61.1
Glyma.17G258800 Glycine max HOM05D006069 ORTHO05D008101 7.6e-27 124.0 104 61.5
THA.LOC104805018 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 9.9e-27 123.6 105 61.0
Aa31LG4G6010 Aethionema arabicum HOM05D006069 ORTHO05D008101 2.2e-26 122.5 111 57.7
Actinidia16995 Actinidia chinensis HOM05D006069 ORTHO05D006669 3.8e-26 121.7 103 57.3
Actinidia15431 Actinidia chinensis HOM05D006069 ORTHO05D008101 8.4e-26 120.6 107 57.0
Peaxi162Scf00081g00135 Petunia axillaris HOM05D002628 ORTHO05D008101 1.1e-25 120.2 105 54.3
Glyma.06G023700 Glycine max HOM05D006069 ORTHO05D008101 1.4e-25 119.8 101 60.4
Lsat_1_v5_gn_0_33081 Lactuca sativa HOM05D006069 ORTHO05D008101 1.9e-25 119.4 107 58.9
Ah.00g000260 Amaranthus hybridus HOM05D006069 ORTHO05D008101 2.4e-25 119.0 101 59.4
THA.LOC104811416 Tarenaya hassleriana HOM05D006069 ORTHO05D008101 2.4e-25 119.0 108 56.5
unitig_747.g21531 Utricularia gibba HOM05D006069 ORTHO05D008101 2.4e-25 119.0 99 59.6
Lalb_Chr03g0033431 Lupinus albus HOM05D006069 ORTHO05D008101 3.2e-25 118.6 104 60.6
Psat0s2878g0120 Pisum sativum HOM05D006069 ORTHO05D008101 3.2e-25 118.6 106 60.4
Sp5g30930 Schrenkiella parvula HOM05D006069 ORTHO05D008101 4.2e-25 118.2 114 55.3
VMungo1309G1320 Vigna mungo HOM05D006069 ORTHO05D008101 4.2e-25 118.2 102 59.8
AUR62041483 Chenopodium quinoa HOM05D006069 ORTHO05D008101 5.4e-25 117.9 105 59.0
DCAR_016725 Daucus carota HOM05D006069 ORTHO05D008101 7.1e-25 117.5 103 57.3
PGSC0003DMG400011549 Solanum tuberosum HOM05D006069 ORTHO05D008101 1.2e-24 116.7 114 54.4
SGA_v2.0_scaffold47G17498 Striga asiatica HOM05D006069 ORTHO05D008101 1.2e-24 116.7 106 55.7
AT1G75810 Arabidopsis thaliana HOM05D006069 ORTHO05D008101 1.6e-24 116.3 114 54.4
AL2G35800 Arabidopsis lyrata HOM05D006069 ORTHO05D008101 2.1e-24 115.9 114 54.4
DCAR_013877 Daucus carota HOM05D006069 ORTHO05D000038 2.7e-24 115.5 102 55.9
Thhalv10019558m.g Eutrema salsugineum HOM05D006069 ORTHO05D008101 2.7e-24 115.5 112 55.4
Carub.0002s2266 Capsella rubella HOM05D006069 ORTHO05D008101 4.6e-24 114.8 116 53.4
BraA02t07058Z Brassica rapa HOM05D006069 ORTHO05D008101 6.0e-24 114.4 114 53.5
BcaC03g15627 Brassica carinata HOM05D006069 ORTHO05D008101 7.8e-24 114.0 114 53.5
C02p33660 Brassica napus HOM05D006069 ORTHO05D008101 7.8e-24 114.0 114 53.5
BolC2t09338H Brassica oleracea HOM05D006069 ORTHO05D008101 7.8e-24 114.0 114 53.5
Sopen12g030410 Solanum pennellii HOM05D006069 ORTHO05D008101 7.8e-24 114.0 112 53.6
BcaB05g24944 Brassica carinata HOM05D006069 ORTHO05D008101 1.3e-23 113.2 117 52.1
A02p20240 Brassica napus HOM05D006069 ORTHO05D008101 1.3e-23 113.2 114 53.5
Lalb_Chr23g0266111 Lupinus albus HOM05D006069 ORTHO05D008101 2.3e-23 112.5 100 57.0
arahy.Tifrunner.gnm1.ann1.Q2AYB8 Arachis hypogaea HOM05D006069 ORTHO05D008101 2.5e-22 109.0 104 56.7
CARHR069230 Cardamine hirsuta HOM05D006069 ORTHO05D008101 3.3e-22 108.6 112 50.9
Phvul.009G017800 Phaseolus vulgaris HOM05D006069 ORTHO05D008101 4.3e-22 108.2 94 59.6
BcaC08g47069 Brassica carinata HOM05D006069 ORTHO05D008101 1.3e-21 106.7 112 50.0
arahy.Tifrunner.gnm1.ann1.KJD857 Arachis hypogaea HOM05D006069 ORTHO05D008101 1.6e-21 106.3 104 54.8
Rhsim06G0020100 Rhododendron simsii HOM05D006069 ORTHO05D008101 1.6e-21 106.3 93 57.0
ECA233G2757 Erigeron canadensis HOM05D006069 ORTHO05D008101 2.8e-21 105.5 92 55.4
Nitab4.5_0003228g0030 Nicotiana tabacum HOM05D006069 ORTHO05D008101 1.4e-20 103.2 105 50.5
Lalb_Chr11g0061821 Lupinus albus HOM05D006069 ORTHO05D008101 1.8e-20 102.8 100 51.0
C06p49760 Brassica napus HOM05D006069 ORTHO05D008101 2.4e-20 102.4 112 49.1
Medtr1g025490 Medicago truncatula HOM05D006069 ORTHO05D008101 2.6e-19 99.0 106 50.0
Aqoxy5G01811 Aquilegia oxysepala HOM05D006069 ORTHO05D008101 5.8e-19 97.8 111 45.0
PSO700G0183 Papaver somniferum HOM05D006069 ORTHO05D008101 5.8e-19 97.8 116 47.4
Psat6g002280 Pisum sativum HOM05D006069 ORTHO05D008101 5.8e-19 97.8 103 47.6
PSO170G3064 Papaver somniferum HOM05D006069 ORTHO05D008101 7.6e-19 97.4 111 48.6
BcaC08g47325 Brassica carinata HOM05D006069 ORTHO05D008101 1.3e-18 96.7 114 45.6
BolC6t40015H Brassica oleracea HOM05D006069 ORTHO05D008101 1.3e-18 96.7 114 45.6
Dinv26438 Davidia involucrata HOM05D006069 ORTHO05D008101 1.3e-18 96.7 76 59.2
Peaxi162Scf00160g00114 Petunia axillaris HOM05D006069 ORTHO05D008101 2.2e-18 95.9 107 48.6
BcaC08g47066 Brassica carinata HOM05D006069 ORTHO05D008101 8.4e-18 94.0 113 45.1
AUR62040543 Chenopodium quinoa HOM05D006069 ORTHO05D009490 1.6e-13 79.7 62 66.1
SalBow6G6594 Salvia bowleyana HOM05D006069 ORTHO05D008101 1.8e-07 59.7 56 53.6
A07p41340 Brassica napus HOM05D006069 ORTHO05D032697 3.0e-07 58.9 68 44.1
SalBow6G5718 Salvia bowleyana HOM05D006069 ORTHO05D008101 4.3e-06 55.1 55 52.7


User provided reference genes

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