Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0981 Punica granatum HOM05D003841 ORTHO05D004602 2.2e-97 359.0 186 100.0
Sabra16G0281100 Salix brachista HOM05D003841 ORTHO05D004602 2.7e-18 96.3 152 36.8
Manes.15G079400 Manihot esculenta HOM05D003841 ORTHO05D004602 4.5e-18 95.5 155 37.4
Potri.001G410100 Populus trichocarpa HOM05D003841 ORTHO05D004602 1.3e-17 94.0 152 36.8
Duzib213G0276 Durio zibethinus HOM05D003841 ORTHO05D004602 2.3e-17 93.2 154 40.9
vmacro09595 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 5.0e-17 92.0 155 40.6
Potri.011G130000 Populus trichocarpa HOM05D003841 ORTHO05D004602 8.6e-17 91.3 153 39.9
Actinidia35303 Actinidia chinensis HOM05D003841 ORTHO05D004602 9.5e-16 87.8 158 41.8
Cc05_g12980 Coffea canephora HOM05D003841 ORTHO05D004602 2.1e-15 86.7 155 38.7
Dinv02831 Davidia involucrata HOM05D003841 ORTHO05D004602 2.8e-15 86.3 158 39.9
Dinv22328 Davidia involucrata HOM05D003841 ORTHO05D004602 2.8e-15 86.3 155 38.7
Ciclev10008955m.g Citrus clementina HOM05D003841 ORTHO05D004602 8.0e-15 84.7 154 36.4
Gohir.A11G281600 Gossypium hirsutum HOM05D003841 ORTHO05D004602 8.0e-15 84.7 154 39.6
TWI39G0875 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 3.1e-14 82.8 163 39.3
Thecc.07G059100 Theobroma cacao HOM05D003841 ORTHO05D004602 8.9e-14 81.3 154 35.7
Lj1A861T58 Lonicera japonica HOM05D003841 ORTHO05D004602 1.2e-13 80.9 154 39.0
Gohir.D11G294200 Gossypium hirsutum HOM05D003841 ORTHO05D004602 2.0e-13 80.1 154 37.7
Gorai.007G317200 Gossypium raimondii HOM05D003841 ORTHO05D004602 2.0e-13 80.1 154 37.7
COL.COLO4_09535 Corchorus olitorius HOM05D003841 ORTHO05D004602 3.4e-13 79.3 150 35.3
RhsimUnG0254800 Rhododendron simsii HOM05D003841 ORTHO05D004602 3.4e-13 79.3 149 38.3
Duzib170G0031 Durio zibethinus HOM05D003841 ORTHO05D004602 7.5e-13 78.2 153 36.6
CiPaw.12G124700 Carya illinoinensis HOM05D003841 ORTHO05D004602 1.3e-12 77.4 169 32.0
QL08p014515 Quercus lobata HOM05D003841 ORTHO05D004602 1.3e-12 77.4 153 36.6
Eucgr.F03390 Eucalyptus grandis HOM05D003841 ORTHO05D004602 1.7e-12 77.0 155 36.8
Oeu005438.1 Olea europaea HOM05D003841 ORTHO05D004602 8.3e-12 74.7 153 37.9
TAR627G0073 Trochodendron aralioides HOM05D003841 ORTHO05D004602 1.1e-11 74.3 156 34.6
EL10Ac4g08014 Beta vulgaris HOM05D003841 ORTHO05D004602 1.4e-11 73.9 156 35.9
Lj8A163G39 Lonicera japonica HOM05D003841 ORTHO05D004602 1.4e-11 73.9 150 40.0
Psat7g160280 Pisum sativum HOM05D003841 ORTHO05D004602 1.9e-11 73.6 158 36.1
Lalb_Chr22g0357311 Lupinus albus HOM05D003841 ORTHO05D004602 2.4e-11 73.2 160 34.4
TAR271G0005 Trochodendron aralioides HOM05D003841 ORTHO05D004602 2.4e-11 73.2 157 36.3
CSS0048456 Camellia sinensis var. sinensis HOM05D003841 ORTHO05D004602 3.2e-11 72.8 158 36.1
Gorai.013G165300 Gossypium raimondii HOM05D003841 ORTHO05D004602 4.1e-11 72.4 154 32.5
PGSC0003DMG400019273 Solanum tuberosum HOM05D003841 ORTHO05D000515 4.1e-11 72.4 158 32.9
AUR62029272 Chenopodium quinoa HOM05D003841 ORTHO05D004602 5.4e-11 72.0 154 35.7
Peaxi162Scf01365g00027 Petunia axillaris HOM05D003841 ORTHO05D004602 5.4e-11 72.0 154 35.7
MSTRG.6876 Avicennia marina HOM05D003841 ORTHO05D004602 7.0e-11 71.6 151 33.8
Nitab4.5_0000552g0100 Nicotiana tabacum HOM05D003841 ORTHO05D004602 7.0e-11 71.6 155 32.3
TAR271G0006 Trochodendron aralioides HOM05D003841 ORTHO05D004602 7.0e-11 71.6 157 36.3
Cfa020471 Carpinus fangiana HOM05D003841 ORTHO05D004602 9.2e-11 71.2 149 34.9
DCAR_022502 Daucus carota HOM05D003841 ORTHO05D004602 9.2e-11 71.2 149 38.3
FvH4_3g21510 Fragaria vesca HOM05D003841 ORTHO05D004602 9.2e-11 71.2 155 39.4
FAN11G1553 Fragaria x ananassa HOM05D003841 ORTHO05D004602 9.2e-11 71.2 155 39.4
Lj3g0010893 Lotus japonicus HOM05D003841 ORTHO05D004602 9.2e-11 71.2 156 36.5
PSO541G4862 Papaver somniferum HOM05D003841 ORTHO05D004602 9.2e-11 71.2 158 32.9
PSO675G5063 Papaver somniferum HOM05D003841 ORTHO05D004602 9.2e-11 71.2 158 34.8
Gohir.D13G147500 Gossypium hirsutum HOM05D003841 ORTHO05D004602 1.2e-10 70.9 156 32.1
Lalb_Chr01g0006261 Lupinus albus HOM05D003841 ORTHO05D004602 1.2e-10 70.9 153 33.3
Haze_09572 Corylus avellana HOM05D003841 ORTHO05D004602 2.7e-10 69.7 153 34.0
Medtr4g081550 Medicago truncatula HOM05D003841 ORTHO05D004602 3.5e-10 69.3 154 36.4
AUR62041149 Chenopodium quinoa HOM05D003841 ORTHO05D004602 4.6e-10 68.9 154 34.4
MD03G1215500 Malus domestica HOM05D003841 ORTHO05D004602 6.0e-10 68.6 184 33.7
Nitab4.5_0003052g0050 Nicotiana tabacum HOM05D003841 ORTHO05D004602 6.0e-10 68.6 150 36.7
Gohir.A13G142900 Gossypium hirsutum HOM05D003841 ORTHO05D004602 7.8e-10 68.2 156 31.4
FAN25G3758 Fragaria x ananassa HOM05D003841 ORTHO05D004602 1.0e-09 67.8 155 38.7
TPR.G34029 Trifolium pratense HOM05D003841 ORTHO05D004602 1.3e-09 67.4 156 34.6
VMungo1127G0850 Vigna mungo HOM05D003841 ORTHO05D004602 2.3e-09 66.6 150 34.7
DCAR_010006 Daucus carota HOM05D003841 ORTHO05D004602 3.0e-09 66.2 147 33.3
FAN16G3040 Fragaria x ananassa HOM05D003841 ORTHO05D004602 3.0e-09 66.2 155 38.1
Glyma.06G262900 Glycine max HOM05D003841 ORTHO05D004602 3.0e-09 66.2 154 31.8
Phvul.011G146700 Phaseolus vulgaris HOM05D003841 ORTHO05D004602 3.9e-09 65.9 149 32.9
Prupe.4G197300 Prunus persica HOM05D003841 ORTHO05D004602 5.0e-09 65.5 149 35.6
Rhsim06G0189000 Rhododendron simsii HOM05D003841 ORTHO05D004602 1.9e-08 63.5 149 31.5
Rhsim06G0190700 Rhododendron simsii HOM05D003841 ORTHO05D004602 1.9e-08 63.5 149 31.5
FAN21G0547 Fragaria x ananassa HOM05D003841 ORTHO05D004602 2.5e-08 63.2 149 35.6
HanXRQChr11g0332121 Helianthus annuus HOM05D003841 ORTHO05D004602 2.5e-08 63.2 160 31.2
Ca_18832_v3 Cicer arietinum L. HOM05D003841 ORTHO05D004602 4.3e-08 62.4 154 31.8
Ca_30091_v3 Cicer arietinum L. HOM05D003841 ORTHO05D004602 4.3e-08 62.4 154 31.8
MD11G1230100 Malus domestica HOM05D003841 ORTHO05D004602 5.6e-08 62.0 182 30.8
CANSAT11G1059 Cannabis sativa HOM05D003841 ORTHO05D004602 7.3e-08 61.6 150 32.7
Migut.H01878 Erythranthe guttata HOM05D003841 ORTHO05D004602 7.3e-08 61.6 154 30.5
Glyma.12G139800 Glycine max HOM05D003841 ORTHO05D004602 7.3e-08 61.6 156 31.4
vmacro11787 Vaccinium macrocarpon HOM05D003841 ORTHO05D004602 7.3e-08 61.6 147 30.6
Glyma.13G284700 Glycine max HOM05D003841 ORTHO05D004602 9.5e-08 61.2 160 31.2
Oeu052335.1 Olea europaea HOM05D003841 ORTHO05D004602 2.1e-07 60.1 148 32.4
RcHm_v2.0_Chr5g0036951 Rosa chinensis HOM05D003841 ORTHO05D004602 2.1e-07 60.1 150 35.3
Migut.M01831 Erythranthe guttata HOM05D003841 ORTHO05D004602 2.8e-07 59.7 153 32.0
Aa31LG3G10490 Aethionema arabicum HOM05D003841 ORTHO05D004602 3.6e-07 59.3 159 35.2
Nn1g06911 Nelumbo nucifera HOM05D003841 ORTHO05D004602 3.6e-07 59.3 151 31.1
Zm00001eb413050 Zea mays HOM05D003841 ORTHO05D004602 3.6e-07 59.3 161 31.1
Actinidia05162 Actinidia chinensis HOM05D003841 ORTHO05D004602 4.7e-07 58.9 138 31.9
Glyma.12G216500 Glycine max HOM05D003841 ORTHO05D004602 4.7e-07 58.9 160 33.1
DCAR_008683 Daucus carota HOM05D003841 ORTHO05D004602 6.2e-07 58.5 154 31.2
arahy.Tifrunner.gnm1.ann1.SRRR95 Arachis hypogaea HOM05D003841 ORTHO05D004602 8.0e-07 58.2 171 30.4
TWI38G0390 Tripterygium wilfordii HOM05D003841 ORTHO05D004602 8.0e-07 58.2 164 33.5
HPP92_004148 Vanilla planifolia HOM05D003841 ORTHO05D004602 8.0e-07 58.2 150 29.3
Ah.06g183230 Amaranthus hybridus HOM05D003841 ORTHO05D004602 1.1e-06 57.8 152 27.6
ECA236G3199 Erigeron canadensis HOM05D003841 ORTHO05D004602 1.1e-06 57.8 160 32.5
arahy.Tifrunner.gnm1.ann1.SIF99T Arachis hypogaea HOM05D003841 ORTHO05D004602 1.4e-06 57.4 155 29.7
Sc03g0009430 Simmondsia chinensis HOM05D003841 ORTHO05D004602 1.4e-06 57.4 149 30.2
arahy.Tifrunner.gnm1.ann1.SKE74K Arachis hypogaea HOM05D003841 ORTHO05D004602 2.3e-06 56.6 168 29.8
THA.LOC104799894 Tarenaya hassleriana HOM05D003841 ORTHO05D004602 3.1e-06 56.2 158 32.9
ClCG05G014990 Citrullus lanatus HOM05D003841 ORTHO05D004602 5.2e-06 55.5 150 28.7
arahy.Tifrunner.gnm1.ann1.GYU1HX Arachis hypogaea HOM05D003841 ORTHO05D004602 8.9e-06 54.7 155 28.4


User provided reference genes

Program Settings