Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 8.1e-169 597.0 312 100.0
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 5.0e-86 322.0 312 56.7
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 5.5e-85 318.5 306 57.5
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 8.0e-84 314.7 302 56.3
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 3.0e-83 312.8 315 55.2
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 1.2e-82 310.8 310 58.7
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 6.3e-81 305.1 323 53.6
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 8.3e-81 304.7 307 54.7
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 3.1e-80 302.8 309 55.3
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 5.4e-80 302.0 320 53.8
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 7.0e-80 301.6 319 54.2
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 7.0e-80 301.6 324 52.8
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 9.2e-80 301.2 314 55.4
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 2.0e-79 300.1 309 55.7
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 2.7e-79 299.7 319 53.6
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 1.3e-78 297.4 311 53.4
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 2.9e-78 296.2 314 54.5
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 1.1e-77 294.3 328 52.7
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 5.6e-77 292.0 309 53.1
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 7.3e-77 291.6 319 51.4
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 9.5e-77 291.2 318 53.8
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 9.5e-77 291.2 309 53.1
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 1.2e-76 290.8 311 52.1
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.6e-76 290.4 309 52.8
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 1.6e-76 290.4 319 53.9
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 2.8e-76 289.7 298 55.7
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 8.0e-76 288.1 317 53.6
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 1.4e-75 287.3 298 54.7
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.8e-75 287.0 307 54.4
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 2.3e-75 286.6 319 51.7
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 3.0e-75 286.2 327 51.7
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 4.0e-75 285.8 321 52.6
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 4.0e-75 285.8 302 54.0
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 1.2e-74 284.3 307 53.4
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 1.2e-74 284.3 318 51.3
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 5.7e-74 282.0 322 51.6
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 5.7e-74 282.0 309 52.1
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 5.7e-74 282.0 319 50.5
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 7.5e-74 281.6 320 52.8
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 9.8e-74 281.2 322 52.2
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 1.3e-73 280.8 318 50.3
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 1.3e-73 280.8 320 51.6
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 1.7e-73 280.4 314 52.9
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.7e-73 280.4 307 53.7
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 8.3e-73 278.1 298 53.7
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 1.4e-72 277.3 317 50.8
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 1.4e-72 277.3 306 53.9
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 2.0e-71 273.5 339 49.0
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 2.0e-71 273.5 316 50.0
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 2.7e-71 273.1 314 51.6
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 4.6e-71 272.3 313 51.8
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 7.8e-71 271.6 308 51.3
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 1.0e-70 271.2 321 50.2
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 1.1e-69 267.7 308 49.0
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 3.3e-69 266.2 337 48.4
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 7.3e-69 265.0 340 47.9
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 9.5e-69 264.6 317 49.5
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 9.5e-69 264.6 332 50.0
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 9.5e-69 264.6 302 53.0
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 2.1e-68 263.5 316 48.7
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 6.2e-68 261.9 321 47.0
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 3.1e-67 259.6 305 49.8
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 3.1e-67 259.6 315 48.3
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 4.0e-67 259.2 306 49.7
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 3.4e-66 256.1 305 51.5
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 4.4e-66 255.8 317 47.6
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 4.4e-66 255.8 316 46.2
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 1.7e-65 253.8 306 49.3
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.7e-65 253.8 306 49.3
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 3.7e-65 252.7 302 49.3
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 4.9e-65 252.3 321 47.7
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 8.3e-65 251.5 299 52.2
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 4.1e-64 249.2 322 47.5
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 5.4e-64 248.8 316 47.8
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 9.2e-64 248.1 321 47.4
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 3.5e-63 246.1 306 46.1
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 5.0e-62 242.3 308 47.1
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 1.5e-61 240.7 314 47.5
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 1.5e-61 240.7 316 44.9
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 1.9e-61 240.4 306 46.4
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 1.9e-61 240.4 299 47.2
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 9.5e-61 238.0 307 46.6
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 2.1e-60 236.9 306 46.4
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 8.1e-60 235.0 295 48.8
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 1.8e-59 233.8 300 46.0
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 2.3e-59 233.4 313 43.5
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 5.8e-58 228.8 312 45.5
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 4.9e-57 225.7 330 42.1
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 5.4e-56 222.2 314 42.4
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 7.1e-56 221.9 313 44.7
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 4.6e-55 219.2 306 42.8
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 2.1e-52 210.3 323 41.8
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 3.4e-50 203.0 330 41.8
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 9.9e-50 201.4 323 40.9
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 8.4e-49 198.4 311 42.4
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 8.4e-49 198.4 305 41.0
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 1.0e-46 191.4 202 53.5
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 8.6e-46 188.3 307 41.0
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 4.0e-43 179.5 296 42.2
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 5.8e-42 175.6 294 40.5
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 1.7e-38 164.1 238 44.1
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 5.6e-37 159.1 189 50.3
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 1.3e-36 157.9 183 50.3
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 2.4e-35 153.7 389 32.4
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 4.5e-34 149.4 343 33.2
Duzib128G0456 Durio zibethinus HOM05D006207 ORTHO05D007868 1.6e-31 141.0 182 46.7
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 5.6e-29 132.5 312 34.3
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 6.2e-28 129.0 135 48.9
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 3.1e-27 126.7 200 39.5
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 9.0e-27 125.2 304 34.5
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 2.9e-25 120.2 303 32.7
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 6.9e-19 99.0 397 26.7
Ca_20352_v3 Cicer arietinum L. HOM05D006207 ORTHO05D007868 2.0e-18 97.4 89 60.7
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 5.8e-18 95.9 346 27.5
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 2.9e-17 93.6 259 32.0
MD04G1166100 Malus domestica HOM05D006207 ORTHO05D007868 3.3e-13 80.1 59 66.1
VMungo1215G0839 Vigna mungo HOM05D006207 ORTHO05D007868 9.7e-13 78.6 78 50.0
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 4.8e-12 76.3 101 42.6
Mapoly0060s0108 Marchantia polymorpha HOM05D006207 ORTHO05D007868 1.1e-08 65.1 124 36.3
VMungo1309G1345 Vigna mungo HOM05D006207 ORTHO05D007868 1.9e-08 64.3 70 48.6
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 7.9e-07 58.9 79 40.5
Cc08_g04640 Coffea canephora HOM05D006207 ORTHO05D007868 1.0e-06 58.5 82 45.1
SalBow8G1578 Salvia bowleyana HOM05D006207 ORTHO05D007868 2.3e-06 57.4 79 45.6


User provided reference genes

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