Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0894 Punica granatum HOM05D007323 ORTHO05D009238 4.7e-132 474.6 244 100.0
COL.COLO4_21139 Corchorus olitorius HOM05D007323 ORTHO05D009238 8.5e-81 304.3 241 67.2
Duzib150G1239 Durio zibethinus HOM05D007323 ORTHO05D009238 6.1e-79 298.1 244 66.0
Thecc.09G063400 Theobroma cacao HOM05D007323 ORTHO05D009238 3.0e-78 295.8 246 66.7
TWI34G0887 Tripterygium wilfordii HOM05D007323 ORTHO05D009238 3.0e-78 295.8 238 66.0
Gorai.001G020100 Gossypium raimondii HOM05D007323 ORTHO05D009238 2.8e-76 289.3 232 68.1
Gohir.D07G019400 Gossypium hirsutum HOM05D007323 ORTHO05D009238 6.9e-75 284.6 232 69.0
Manes.16G085700 Manihot esculenta HOM05D007323 ORTHO05D009238 2.6e-74 282.7 244 63.9
Eucgr.B01965 Eucalyptus grandis HOM05D007323 ORTHO05D009238 4.5e-74 282.0 199 74.4
CANSAT25G3877 Cannabis sativa HOM05D007323 ORTHO05D009238 5.9e-74 281.6 226 65.5
Potri.006G220800 Populus trichocarpa HOM05D007323 ORTHO05D009238 2.2e-73 279.6 229 67.7
VMungo1309G0522 Vigna mungo HOM05D007323 ORTHO05D009238 1.1e-72 277.3 235 65.5
Sabra06G0170600 Salix brachista HOM05D007323 ORTHO05D009238 1.4e-72 276.9 229 66.8
Glyma.06G055900 Glycine max HOM05D007323 ORTHO05D009238 2.5e-72 276.2 212 69.3
Phvul.009G082000 Phaseolus vulgaris HOM05D007323 ORTHO05D009238 1.2e-71 273.9 235 65.1
Ciclev10009314m.g Citrus clementina HOM05D007323 ORTHO05D009238 1.6e-71 273.5 246 61.4
Ca_15835_v3 Cicer arietinum L. HOM05D007323 ORTHO05D009238 4.7e-71 271.9 228 64.9
Lalb_Chr08g0244811 Lupinus albus HOM05D007323 ORTHO05D009238 4.7e-71 271.9 195 72.8
Cfa017873 Carpinus fangiana HOM05D007323 ORTHO05D009238 1.4e-70 270.4 244 61.9
QL02p017014 Quercus lobata HOM05D007323 ORTHO05D009238 1.4e-70 270.4 195 71.3
Prupe.1G404100 Prunus persica HOM05D007323 ORTHO05D009238 2.3e-70 269.6 246 63.4
CiPaw.16G068300 Carya illinoinensis HOM05D007323 ORTHO05D009238 3.0e-70 269.2 231 63.2
HanXRQChr10g0309971 Helianthus annuus HOM05D007323 ORTHO05D009238 5.1e-70 268.5 244 61.5
GSVIVG01035470001 Vitis vinifera HOM05D007323 ORTHO05D009238 6.7e-70 268.1 184 73.9
Cc08_g01150 Coffea canephora HOM05D007323 ORTHO05D009238 1.5e-69 266.9 245 62.4
FAN20G2477 Fragaria x ananassa HOM05D007323 ORTHO05D009238 3.3e-69 265.8 230 63.5
Dinv41843 Davidia involucrata HOM05D007323 ORTHO05D009238 4.4e-69 265.4 207 68.1
Lj1g0021270 Lotus japonicus HOM05D007323 ORTHO05D009238 4.4e-69 265.4 228 64.9
FAN27G1709 Fragaria x ananassa HOM05D007323 ORTHO05D009238 1.3e-68 263.8 230 62.6
RcHm_v2.0_Chr6g0311811 Rosa chinensis HOM05D007323 ORTHO05D009238 1.3e-68 263.8 230 62.6
Nn8g38659 Nelumbo nucifera HOM05D007323 ORTHO05D009238 1.7e-68 263.5 243 60.1
Actinidia03545 Actinidia chinensis HOM05D007323 ORTHO05D009238 2.2e-68 263.1 215 66.5
FvH4_2g30980 Fragaria vesca HOM05D007323 ORTHO05D009238 2.2e-68 263.1 230 62.6
FAN24G0989 Fragaria x ananassa HOM05D007323 ORTHO05D009238 3.1e-67 259.2 230 62.2
Gohir.A07G019600 Gossypium hirsutum HOM05D007323 ORTHO05D009238 3.1e-67 259.2 197 70.1
TPR.G3557 Trifolium pratense HOM05D007323 ORTHO05D009238 5.3e-67 258.5 195 69.7
Atru.chr7.1847 Acer truncatum HOM05D007323 ORTHO05D009238 7.0e-67 258.1 173 76.9
Sc06g0001110 Simmondsia chinensis HOM05D007323 ORTHO05D009238 7.0e-67 258.1 221 62.0
ECA234G0604 Erigeron canadensis HOM05D007323 ORTHO05D009238 2.0e-66 256.5 245 58.4
Medtr3g105050 Medicago truncatula HOM05D007323 ORTHO05D009238 2.0e-66 256.5 209 67.5
Rhsim10G0107900 Rhododendron simsii HOM05D007323 ORTHO05D009238 2.6e-66 256.1 173 76.9
MD15G1049800 Malus domestica HOM05D007323 ORTHO05D009238 1.0e-65 254.2 244 59.4
arahy.Tifrunner.gnm1.ann1.7DEW7H Arachis hypogaea HOM05D007323 ORTHO05D009238 1.3e-65 253.8 213 65.7
ClCG08G009880 Citrullus lanatus HOM05D007323 ORTHO05D009238 2.9e-65 252.7 246 58.9
vmacro05236 Vaccinium macrocarpon HOM05D007323 ORTHO05D009238 3.8e-65 252.3 182 72.5
MELO3C011483.2 Cucumis melo HOM05D007323 ORTHO05D009238 1.1e-64 250.8 247 58.3
Lsat_1_v5_gn_5_79461 Lactuca sativa HOM05D007323 ORTHO05D009238 1.9e-64 250.0 244 56.6
Sed0017686 Sechium edule HOM05D007323 ORTHO05D009238 1.9e-64 250.0 246 58.5
Haze_18294 Corylus avellana HOM05D007323 ORTHO05D009238 3.2e-64 249.2 294 51.7
Aqoxy7G01049 Aquilegia oxysepala HOM05D007323 ORTHO05D009238 3.6e-63 245.7 210 64.8
SGA_v2.0_scaffold20G09163 Striga asiatica HOM05D007323 ORTHO05D009238 3.6e-63 245.7 248 58.1
CsaV3_6G031970 Cucumis sativus L. HOM05D007323 ORTHO05D009238 4.7e-63 245.4 246 57.7
MSTRG.25986 Avicennia marina HOM05D007323 ORTHO05D009238 1.0e-62 244.2 251 55.8
THA.LOC104819519 Tarenaya hassleriana HOM05D007323 ORTHO05D009238 2.3e-62 243.0 205 61.5
arahy.Tifrunner.gnm1.ann1.287SRD Arachis hypogaea HOM05D007323 ORTHO05D009238 3.0e-62 242.7 253 56.5
CDE05G0862 Ceratophyllum demersum HOM05D007323 ORTHO05D009238 8.8e-62 241.1 220 61.4
Hund03297 Selenicereus undatus HOM05D007323 ORTHO05D009238 5.7e-61 238.4 229 58.5
Sopen08g017220 Solanum pennellii HOM05D007323 ORTHO05D009238 7.4e-61 238.0 195 63.6
Sp4g06990 Schrenkiella parvula HOM05D007323 ORTHO05D009238 2.8e-60 236.1 205 62.4
ATR0598G133 Amborella trichopoda HOM05D007323 ORTHO05D009238 3.7e-60 235.7 175 68.0
Migut.A00078 Erythranthe guttata HOM05D007323 ORTHO05D009238 4.8e-60 235.3 195 63.1
HPP92_024332 Vanilla planifolia HOM05D007323 ORTHO05D009238 6.3e-60 235.0 243 56.8
AL4G18960 Arabidopsis lyrata HOM05D007323 ORTHO05D009238 8.2e-60 234.6 201 62.7
Aa31LG2G12250 Aethionema arabicum HOM05D007323 ORTHO05D009238 1.1e-59 234.2 212 59.4
Nitab4.5_0000446g0180 Nicotiana tabacum HOM05D007323 ORTHO05D009238 1.1e-59 234.2 194 62.4
Nitab4.5_0002831g0040 Nicotiana tabacum HOM05D007323 ORTHO05D009238 1.1e-59 234.2 194 62.4
Thhalv10002091m.g Eutrema salsugineum HOM05D007323 ORTHO05D009238 1.8e-59 233.4 201 63.2
BcaB08g35255 Brassica carinata HOM05D007323 ORTHO05D009238 5.3e-59 231.9 195 63.6
BcaC07g40825 Brassica carinata HOM05D007323 ORTHO05D009238 9.1e-59 231.1 204 59.8
A09p55240 Brassica napus HOM05D007323 ORTHO05D009238 9.1e-59 231.1 242 54.1
C08p38170 Brassica napus HOM05D007323 ORTHO05D009238 9.1e-59 231.1 204 59.8
BolC8t51392H Brassica oleracea HOM05D007323 ORTHO05D009238 9.1e-59 231.1 204 59.8
EL10Ac2g03780 Beta vulgaris HOM05D007323 ORTHO05D009238 1.2e-58 230.7 247 55.5
PSO063G6894 Papaver somniferum HOM05D007323 ORTHO05D009238 2.0e-58 229.9 235 55.3
Carub.0004s0625 Capsella rubella HOM05D007323 ORTHO05D009238 5.9e-58 228.4 238 55.5
PSO421G0353 Papaver somniferum HOM05D007323 ORTHO05D009238 5.9e-58 228.4 235 54.9
BraA09t40931Z Brassica rapa HOM05D007323 ORTHO05D009238 1.0e-57 227.6 240 53.8
DCAR_007767 Daucus carota HOM05D007323 ORTHO05D009238 8.5e-57 224.6 193 61.7
unitig_8.g4975 Utricularia gibba HOM05D007323 ORTHO05D009238 3.2e-56 222.6 196 60.2
Zm00001eb005760 Zea mays HOM05D007323 ORTHO05D009238 5.5e-56 221.9 209 58.9
Os03g0176700 Oryza sativa ssp. japonica HOM05D007323 ORTHO05D009238 7.2e-56 221.5 194 62.4
AT2G26340 Arabidopsis thaliana HOM05D007323 ORTHO05D009238 6.7e-54 214.9 203 59.6
CARHR118450 Cardamine hirsuta HOM05D007323 ORTHO05D009238 1.4e-51 207.2 174 63.2
AUR62009079 Chenopodium quinoa HOM05D007323 ORTHO05D009238 7.0e-51 204.9 163 66.9
Eucgr.B01870 Eucalyptus grandis HOM05D007323 ORTHO05D009238 1.6e-50 203.8 136 78.7
Psat5g030560 Pisum sativum HOM05D007323 ORTHO05D009238 5.9e-50 201.8 167 62.9
A09p54710 Brassica napus HOM05D007323 ORTHO05D009238 5.0e-49 198.7 170 60.6
SEGI_00918 Sequoiadendron giganteum HOM05D007323 ORTHO05D009238 2.7e-47 193.0 226 50.9
AagrBONN_evm.TU.Sc2ySwM_228.4439 Anthoceros agrestis HOM05D007323 ORTHO05D009238 6.3e-44 181.8 152 58.6
Pp3c4_13280 Physcomitrium patens HOM05D007323 ORTHO05D009238 8.3e-44 181.4 177 53.7
Peaxi162Scf00486g01025 Petunia axillaris HOM05D007323 ORTHO05D009238 9.1e-43 177.9 137 66.4
SMO239G0030 Selaginella moellendorffii HOM05D007323 ORTHO05D009238 2.9e-41 172.9 208 48.1
AUR62020587 Chenopodium quinoa HOM05D007323 ORTHO05D009238 3.3e-40 169.5 244 48.0
Mapoly0001s0019 Marchantia polymorpha HOM05D007323 ORTHO05D009238 5.2e-38 162.2 155 52.3
TAR636G1368 Trochodendron aralioides HOM05D007323 ORTHO05D009238 4.4e-37 159.1 162 53.1
Cpa.g.sc126.24 Carica papaya HOM05D007323 ORTHO05D009238 3.1e-35 152.9 105 75.2
CSS0001075 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 5.4e-35 152.1 105 76.2
CSS0018719 Camellia sinensis var. sinensis HOM05D007323 ORTHO05D009238 5.4e-35 152.1 105 76.2
MBI13_g42814_MAGBIO Magnolia biondii HOM05D007323 ORTHO05D009238 1.7e-33 147.1 316 37.3
CBR_g19268 Chara braunii HOM05D007323 ORTHO05D009238 2.0e-26 123.6 152 42.8
Cre16.g684150 Chlamydomonas reinhardtii HOM05D007323 ORTHO05D009238 4.6e-18 95.9 190 34.2
MD08G1071400 Malus domestica HOM05D007323 ORTHO05D009238 7.8e-18 95.1 62 77.4
Os03g0176800 Oryza sativa ssp. japonica HOM05D009542 ORTHO05D294036 2.3e-09 67.0 140 32.9
Eucgr.C00726 Eucalyptus grandis HOM05D007323 ORTHO05D009238 3.9e-09 66.2 61 59.0
Solyc08g061800.3 Solanum lycopersicum HOM05D007323 ORTHO05D009238 5.6e-08 62.4 58 56.9


User provided reference genes

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