Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0878 Punica granatum HOM05D000047 ORTHO05D001383 8.4e-207 723.4 350 100.0
TWI31G0444 Tripterygium wilfordii HOM05D000047 ORTHO05D001383 7.0e-28 129.0 210 36.2
RcHm_v2.0_Chr6g0263201 Rosa chinensis HOM05D009186 ORTHO05D011460 2.7e-19 100.5 157 35.0
Rhsim02G0050900 Rhododendron simsii HOM05D002672 ORTHO05D002887 4.2e-17 93.2 300 27.7
FvH4_1g29791 Fragaria vesca HOM05D000047 ORTHO05D001383 2.1e-16 90.9 129 37.2
CSS0038410 Camellia sinensis var. sinensis HOM05D019952 ORTHO05D001383 4.7e-16 89.7 124 38.7
TWI38G1206 Tripterygium wilfordii HOM05D000047 ORTHO05D014218 4.4e-14 83.2 224 29.0
FvH4_3g31360 Fragaria vesca HOM05D002894 ORTHO05D002579 7.5e-14 82.4 254 27.6
CANSAT54G2851 Cannabis sativa HOM05D008471 ORTHO05D002579 2.2e-13 80.9 155 31.0
MBI11_g23658_MAGBIO Magnolia biondii HOM05D008568 ORTHO05D006740 3.2e-12 77.0 180 29.4
FvH4_4g05275 Fragaria vesca HOM05D067642 ORTHO05D014218 5.4e-12 76.3 140 32.9
QL04p030580 Quercus lobata HOM05D000047 ORTHO05D000044 5.4e-12 76.3 142 31.7
QL05p044848 Quercus lobata HOM05D000047 ORTHO05D000044 5.4e-12 76.3 142 31.7
QL06p007831 Quercus lobata HOM05D000047 ORTHO05D000044 5.4e-12 76.3 142 31.7
FvH4_5g22540 Fragaria vesca HOM05D000047 ORTHO05D000044 7.0e-12 75.9 155 32.3
Sopen09g022170 Solanum pennellii HOM05D000047 ORTHO05D001383 7.0e-12 75.9 249 24.5
QL93p0305_0012 Quercus lobata HOM05D000047 ORTHO05D000044 1.2e-11 75.1 142 31.0
QL01p017897 Quercus lobata HOM05D000047 ORTHO05D000044 2.7e-11 73.9 142 31.0
Sopen01g018560 Solanum pennellii HOM05D000047 ORTHO05D001383 2.7e-11 73.9 247 24.3
Sopen04g024170 Solanum pennellii HOM05D000047 ORTHO05D001383 2.7e-11 73.9 154 28.6
Sopen01g006520 Solanum pennellii HOM05D000047 ORTHO05D001383 3.5e-11 73.6 154 28.6
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 3.5e-11 73.6 154 28.6
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 3.5e-11 73.6 154 28.6
Sopen04g021500 Solanum pennellii HOM05D000047 ORTHO05D001383 3.5e-11 73.6 154 28.6
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 3.5e-11 73.6 154 28.6
Sopen06g006890 Solanum pennellii HOM05D000047 ORTHO05D001383 3.5e-11 73.6 154 28.6
Sopen07g020380 Solanum pennellii HOM05D000047 ORTHO05D001383 3.5e-11 73.6 154 28.6
Sopen08g008120 Solanum pennellii HOM05D000047 ORTHO05D000044 3.5e-11 73.6 154 28.6
Sopen10g013080 Solanum pennellii HOM05D000047 ORTHO05D001383 3.5e-11 73.6 154 28.6
QL07p033814 Quercus lobata HOM05D000047 ORTHO05D000044 4.5e-11 73.2 142 31.0
Sopen04g012780 Solanum pennellii HOM05D000047 ORTHO05D001383 4.5e-11 73.2 154 28.6
Sopen06g009330 Solanum pennellii HOM05D000047 ORTHO05D000044 4.5e-11 73.2 154 28.6
Sopen09g021660 Solanum pennellii HOM05D000004 ORTHO05D000002 4.5e-11 73.2 154 28.6
FvH4_6g13112 Fragaria vesca HOM05D000047 ORTHO05D001383 5.9e-11 72.8 234 25.6
Sopen10g007420 Solanum pennellii HOM05D000047 ORTHO05D001383 5.9e-11 72.8 249 24.1
QL06p019599 Quercus lobata HOM05D000047 ORTHO05D000044 7.8e-11 72.4 142 31.0
QL93p0181_0006 Quercus lobata HOM05D000047 ORTHO05D000044 7.8e-11 72.4 142 31.0
Sopen04g022080 Solanum pennellii HOM05D000047 ORTHO05D001383 7.8e-11 72.4 154 28.6
Sopen12g025220 Solanum pennellii HOM05D000047 ORTHO05D001383 7.8e-11 72.4 154 28.6
Sopen05g008560 Solanum pennellii HOM05D000047 ORTHO05D001383 1.0e-10 72.0 154 27.9
Sopen12g012050 Solanum pennellii HOM05D000047 ORTHO05D001383 1.0e-10 72.0 154 27.9
Sopen04g011740 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-10 71.6 244 24.2
Sopen08g007090 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-10 71.6 142 28.9
Sopen10g027330 Solanum pennellii HOM05D000047 ORTHO05D001383 1.3e-10 71.6 154 28.6
FvH4_1g29804 Fragaria vesca HOM05D013226 ORTHO05D001383 1.7e-10 71.2 164 26.8
Sopen06g011440 Solanum pennellii HOM05D000047 ORTHO05D000044 1.7e-10 71.2 303 23.4
Sopen07g025200 Solanum pennellii HOM05D000047 ORTHO05D001383 2.9e-10 70.5 154 27.9
Sopen08g010280 Solanum pennellii HOM05D000047 ORTHO05D001383 2.9e-10 70.5 154 28.6
Sopen01g018380 Solanum pennellii HOM05D000047 ORTHO05D001383 3.9e-10 70.1 154 27.9
Sopen11g023890 Solanum pennellii HOM05D000047 ORTHO05D000044 5.0e-10 69.7 142 31.0
Sopen06g013120 Solanum pennellii HOM05D000047 ORTHO05D001383 6.6e-10 69.3 154 27.9
Sopen05g013390 Solanum pennellii HOM05D000047 ORTHO05D001383 8.6e-10 68.9 154 27.9
FvH4_4g17921 Fragaria vesca HOM05D013226 ORTHO05D001383 1.1e-09 68.6 164 28.7
PSO017G5958 Papaver somniferum HOM05D009560 ORTHO05D001383 1.1e-09 68.6 133 30.1
PSO675G4592 Papaver somniferum HOM05D009560 ORTHO05D001383 1.1e-09 68.6 152 30.3
QL02p013119 Quercus lobata HOM05D000560 ORTHO05D000417 1.1e-09 68.6 134 31.3
Sopen02g008570 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-09 68.6 142 28.9
Sopen08g005540 Solanum pennellii HOM05D000047 ORTHO05D001383 1.1e-09 68.6 149 27.5
Dinv40638 Davidia involucrata HOM05D008893 ORTHO05D001383 1.5e-09 68.2 138 29.0
Hund09920 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.5e-09 68.2 148 29.1
Sopen09g012580 Solanum pennellii HOM05D000047 ORTHO05D001383 1.5e-09 68.2 154 27.3
Dinv08376 Davidia involucrata HOM05D008893 ORTHO05D001383 1.9e-09 67.8 181 24.3
FAN26G0632 Fragaria x ananassa HOM05D002894 ORTHO05D002579 1.9e-09 67.8 162 31.5
Sopen01g019760 Solanum pennellii HOM05D000047 ORTHO05D000044 2.5e-09 67.4 154 27.3
Sopen10g005940 Solanum pennellii HOM05D000047 ORTHO05D011806 2.5e-09 67.4 175 25.1
MELO3C033014.2 Cucumis melo HOM05D000047 ORTHO05D001383 3.3e-09 67.0 143 28.7
FvH4_2g15191 Fragaria vesca HOM05D000047 ORTHO05D001383 3.3e-09 67.0 199 26.1
Hund15656 Selenicereus undatus HOM05D000047 ORTHO05D001383 3.3e-09 67.0 142 31.7
Sopen09g008960 Solanum pennellii HOM05D000047 ORTHO05D001383 3.3e-09 67.0 154 26.6
Sopen02g009500 Solanum pennellii HOM05D000047 ORTHO05D001383 4.3e-09 66.6 142 30.3
Sopen08g008240 Solanum pennellii HOM05D000047 ORTHO05D001383 4.3e-09 66.6 249 22.9
Sopen08g015290 Solanum pennellii HOM05D000047 ORTHO05D001383 4.3e-09 66.6 154 26.6
Sopen08g019000 Solanum pennellii HOM05D000047 ORTHO05D001383 5.6e-09 66.2 142 29.6
Dinv05873 Davidia involucrata HOM05D008893 ORTHO05D001383 7.3e-09 65.9 136 29.4
MBI14_g24985_MAGBIO Magnolia biondii HOM05D008568 ORTHO05D006740 9.5e-09 65.5 149 30.9
Sopen10g010190 Solanum pennellii HOM05D000047 ORTHO05D001383 9.5e-09 65.5 142 28.2
FvH4_4g02081 Fragaria vesca HOM05D013226 ORTHO05D001383 1.6e-08 64.7 131 27.5
Medtr5g043720 Medicago truncatula HOM05D007951 ORTHO05D010060 1.6e-08 64.7 286 26.6
PSO339G2430 Papaver somniferum HOM05D009560 ORTHO05D001383 2.8e-08 63.9 133 31.6
Sopen11g019170 Solanum pennellii HOM05D000047 ORTHO05D001383 2.8e-08 63.9 249 22.5
PSO063G7603 Papaver somniferum HOM05D009560 ORTHO05D001383 3.6e-08 63.5 170 26.5
Sopen02g002310 Solanum pennellii HOM05D000047 ORTHO05D001383 8.0e-08 62.4 189 25.4
Medtr0401s0010 Medicago truncatula HOM05D007951 ORTHO05D010060 1.4e-07 61.6 307 23.8
PSO541G1592 Papaver somniferum HOM05D009560 ORTHO05D001383 1.4e-07 61.6 121 31.4
Hund10359 Selenicereus undatus HOM05D000047 ORTHO05D001383 1.4e-07 61.6 120 32.5
Lj5g0013972 Lotus japonicus HOM05D000429 ORTHO05D002578 1.8e-07 61.2 127 29.9
Hund00874 Selenicereus undatus HOM05D000047 ORTHO05D001383 2.3e-07 60.8 126 27.8
CANSAT25G2429 Cannabis sativa HOM05D000047 ORTHO05D001383 4.0e-07 60.1 109 28.4
arahy.Tifrunner.gnm1.ann1.RW3FWP Arachis hypogaea HOM05D003133 ORTHO05D001383 6.8e-07 59.3 117 30.8
PSO339G3951 Papaver somniferum HOM05D009560 ORTHO05D001383 6.8e-07 59.3 121 33.9
TPR.G18553 Trifolium pratense HOM05D000047 ORTHO05D000589 1.2e-06 58.5 135 28.1
arahy.Tifrunner.gnm1.ann1.R1MCB0 Arachis hypogaea HOM05D000429 ORTHO05D000880 1.5e-06 58.2 114 32.5
PSO063G0571 Papaver somniferum HOM05D009560 ORTHO05D001383 1.5e-06 58.2 121 31.4
PSO832G2673 Papaver somniferum HOM05D009560 ORTHO05D001383 1.5e-06 58.2 90 34.4
PSO478G3003 Papaver somniferum HOM05D009560 ORTHO05D001383 2.6e-06 57.4 84 35.7
PSO541G6204 Papaver somniferum HOM05D009560 ORTHO05D001383 2.6e-06 57.4 99 31.3
Ca_05624_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 3.4e-06 57.0 136 26.5
Lj3g0010754 Lotus japonicus HOM05D000429 ORTHO05D000880 3.4e-06 57.0 127 29.1
Hund05906 Selenicereus undatus HOM05D000047 ORTHO05D001383 3.4e-06 57.0 111 32.4
QL07p017311 Quercus lobata HOM05D000047 ORTHO05D000044 4.4e-06 56.6 101 31.7
Sopen05g020260 Solanum pennellii HOM05D000047 ORTHO05D000044 4.4e-06 56.6 109 30.3
Manes.14G150022 Manihot esculenta HOM05D000429 ORTHO05D000880 5.8e-06 56.2 124 29.0
RhsimUnG0112200 Rhododendron simsii HOM05D008893 ORTHO05D001383 5.8e-06 56.2 123 30.1
PSO700G0088 Papaver somniferum HOM05D009560 ORTHO05D001383 7.5e-06 55.8 104 27.9
FvH4_4g25732 Fragaria vesca HOM05D000047 ORTHO05D001383 9.8e-06 55.5 126 29.4


User provided reference genes

Program Settings