Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 4.2e-299 1031.2 780 100.0
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 1.6e-141 507.7 821 48.2
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 2.6e-123 447.2 784 45.9
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 1.5e-118 431.4 728 43.8
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 1.1e-116 425.2 804 40.4
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 3.4e-115 420.2 806 43.9
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 4.9e-114 416.4 839 42.2
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.3e-106 391.7 809 44.3
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 2.4e-105 387.5 823 41.6
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 6.6e-103 379.4 777 41.3
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 1.2e-101 375.2 862 42.0
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 6.2e-101 372.9 802 37.8
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 2.6e-99 367.5 812 37.7
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 4.4e-99 366.7 833 40.6
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 9.2e-97 359.0 821 36.5
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 4.6e-96 356.7 801 37.8
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 1.0e-95 355.5 809 43.9
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 2.3e-95 354.4 784 36.2
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 3.9e-95 353.6 383 55.4
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 5.1e-95 353.2 816 38.1
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 1.9e-94 351.3 812 37.2
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 5.6e-94 349.7 775 39.0
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 1.6e-93 348.2 821 34.8
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 1.6e-93 348.2 785 39.7
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 1.6e-93 348.2 793 40.6
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 2.4e-92 344.4 795 40.1
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 6.9e-92 342.8 799 38.8
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 1.5e-91 341.7 794 41.9
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 4.9e-90 336.7 806 37.1
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 8.4e-90 335.9 742 35.7
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 8.4e-90 335.9 553 41.6
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.4e-89 335.1 777 37.3
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 1.4e-89 335.1 778 43.3
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 2.4e-89 334.3 790 40.3
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 6.0e-88 329.7 543 45.5
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 7.8e-88 329.3 790 37.7
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 1.7e-87 328.2 782 35.2
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 8.7e-87 325.9 812 35.0
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 1.5e-86 325.1 775 34.5
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 4.8e-85 320.1 822 37.3
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 8.1e-85 319.3 773 37.3
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 1.4e-84 318.5 817 40.9
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 9.0e-84 315.8 386 51.3
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 3.4e-83 313.9 556 39.6
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 7.6e-83 312.8 789 37.8
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 7.6e-83 312.8 789 37.8
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 3.5e-80 303.9 804 35.4
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 4.6e-80 303.5 776 37.2
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 4.6e-80 303.5 581 38.2
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 6.0e-80 303.1 805 33.8
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 8.7e-79 299.3 774 33.6
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 1.5e-78 298.5 792 35.7
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 1.9e-78 298.1 774 33.6
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 2.5e-78 297.7 793 33.7
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 8.1e-77 292.7 601 41.4
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 1.1e-76 292.4 773 32.6
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 5.3e-76 290.0 569 38.7
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 3.4e-75 287.3 776 37.0
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 3.4e-75 287.3 777 37.1
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 2.9e-74 284.3 795 36.5
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 4.2e-73 280.4 806 38.3
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 9.3e-73 279.3 778 33.8
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 1.0e-71 275.8 777 32.7
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 1.5e-70 271.9 788 40.1
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 2.1e-69 268.1 780 31.5
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 8.2e-69 266.2 784 33.5
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 1.4e-68 265.4 795 32.2
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 1.4e-68 265.4 779 34.1
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 9.0e-68 262.7 775 31.6
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 9.0e-68 262.7 533 36.0
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 2.0e-67 261.5 776 31.7
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 7.6e-67 259.6 604 36.1
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 2.2e-66 258.1 834 30.8
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 4.3e-62 243.8 457 43.8
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 3.8e-58 230.7 492 33.7
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 1.2e-56 225.7 487 36.3
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 3.3e-54 217.6 798 31.5
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 1.1e-49 202.6 621 31.9
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 1.2e-48 199.1 379 39.3
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 3.6e-48 197.6 381 38.3
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 4.7e-48 197.2 264 47.3
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 2.2e-34 151.8 767 29.7
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 1.4e-31 142.5 801 29.0
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 4.0e-31 141.0 492 35.4
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 2.0e-30 138.7 592 28.5
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 1.4e-28 132.5 791 26.2
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 4.5e-27 127.5 791 25.3
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 8.5e-26 123.2 567 30.0
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.8e-23 115.5 301 38.2
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 5.2e-23 114.0 204 41.7
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 1.5e-22 112.5 117 52.1
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 4.5e-19 100.9 120 48.3
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 1.6e-16 92.4 530 22.5
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 2.1e-16 92.0 282 34.0
HPP92_019587 Vanilla planifolia HOM05D007213 ORTHO05D009165 2.0e-14 85.5 133 42.9
Actinidia08360 Actinidia chinensis HOM05D007213 ORTHO05D009165 2.4e-12 78.6 78 59.0
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 4.1e-12 77.8 77 54.5
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 4.6e-11 74.3 175 36.6
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 5.0e-10 70.9 871 22.8
ECA238G3550 Erigeron canadensis HOM05D008258 ORTHO05D003386 7.3e-09 67.0 97 44.3
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 3.1e-07 61.6 56 60.7


User provided reference genes

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