Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0759 Punica granatum HOM05D006473 ORTHO05D008108 4.5e-92 341.3 176 100.0
FAN05G1961 Fragaria x ananassa HOM05D006473 ORTHO05D008108 1.3e-35 153.7 184 52.2
Sabra06G0006200 Salix brachista HOM05D006473 ORTHO05D008108 1.7e-35 153.3 182 52.2
RcHm_v2.0_Chr2g0153221 Rosa chinensis HOM05D006473 ORTHO05D008108 3.0e-35 152.5 184 52.7
Potri.006G008000 Populus trichocarpa HOM05D006473 ORTHO05D008108 1.2e-33 147.1 180 49.4
Prupe.3G184300 Prunus persica HOM05D006473 ORTHO05D008108 3.6e-33 145.6 175 52.6
Thecc.01G174700 Theobroma cacao HOM05D006473 ORTHO05D008108 6.2e-33 144.8 169 49.1
CiPaw.03G109100 Carya illinoinensis HOM05D006473 ORTHO05D008108 8.1e-33 144.4 174 49.4
Duzib138G0874 Durio zibethinus HOM05D006473 ORTHO05D008108 2.4e-32 142.9 171 48.5
Eucgr.A00949 Eucalyptus grandis HOM05D006473 ORTHO05D008108 2.4e-32 142.9 156 53.2
ClCG11G016910 Citrullus lanatus HOM05D006473 ORTHO05D008108 3.1e-32 142.5 172 51.2
TWI34G1686 Tripterygium wilfordii HOM05D006473 ORTHO05D008108 3.1e-32 142.5 166 54.2
FvH4_6g39300 Fragaria vesca HOM05D006473 ORTHO05D008108 6.8e-32 141.4 179 49.7
MD09G1143500 Malus domestica HOM05D006473 ORTHO05D008108 1.2e-31 140.6 173 52.0
MD17G1129800 Malus domestica HOM05D006473 ORTHO05D008108 3.4e-31 139.0 178 49.4
COL.COLO4_19989 Corchorus olitorius HOM05D006473 ORTHO05D008108 4.4e-31 138.7 173 48.0
Gorai.007G172600 Gossypium raimondii HOM05D006473 ORTHO05D008108 4.4e-31 138.7 184 43.5
Gohir.D11G162300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 5.8e-31 138.3 184 43.5
Glyma.13G004200 Glycine max HOM05D006473 ORTHO05D008108 7.6e-31 137.9 164 54.3
Gohir.A11G155300 Gossypium hirsutum HOM05D006473 ORTHO05D008108 1.7e-30 136.7 184 42.9
Manes.08G068100 Manihot esculenta HOM05D006473 ORTHO05D008108 3.8e-30 135.6 161 51.6
FAN09G0937 Fragaria x ananassa HOM05D006473 ORTHO05D008108 4.9e-30 135.2 188 47.9
FAN14G2613 Fragaria x ananassa HOM05D006473 ORTHO05D008108 4.9e-30 135.2 188 47.9
COL.COLO4_18222 Corchorus olitorius HOM05D006473 ORTHO05D008108 6.4e-30 134.8 175 46.9
MELO3C026363.2 Cucumis melo HOM05D006473 ORTHO05D008108 6.4e-30 134.8 169 48.5
Glyma.20G063000 Glycine max HOM05D006473 ORTHO05D008108 6.4e-30 134.8 157 54.1
Haze_13544 Corylus avellana HOM05D006473 ORTHO05D008108 2.4e-29 132.9 176 47.7
Cfa023365 Carpinus fangiana HOM05D006473 ORTHO05D008108 4.1e-29 132.1 176 48.3
Lj6g0005292 Lotus japonicus HOM05D006473 ORTHO05D008108 4.1e-29 132.1 175 51.4
Cpa.g.sc8.265 Carica papaya HOM05D006473 ORTHO05D008108 9.2e-29 131.0 185 46.5
Phvul.007G120134 Phaseolus vulgaris HOM05D006473 ORTHO05D008108 2.1e-28 129.8 163 51.5
Sabra16G0000300 Salix brachista HOM05D006473 ORTHO05D008108 6.0e-28 128.3 175 43.4
Sed0027280 Sechium edule HOM05D006473 ORTHO05D008108 7.8e-28 127.9 167 51.5
CsaV3_4G032520 Cucumis sativus L. HOM05D006473 ORTHO05D008108 1.3e-27 127.1 174 47.1
CiPaw.04G072200 Carya illinoinensis HOM05D006473 ORTHO05D008108 3.0e-27 125.9 165 49.7
VMungo0540G0033 Vigna mungo HOM05D006473 ORTHO05D008108 1.1e-26 124.0 160 52.5
CANSAT64G1482 Cannabis sativa HOM05D006473 ORTHO05D008108 1.9e-26 123.2 177 45.8
Ciclev10012907m.g Citrus clementina HOM05D006473 ORTHO05D008108 2.5e-26 122.9 165 49.7
TPR.G17559 Trifolium pratense HOM05D006473 ORTHO05D008108 5.6e-26 121.7 161 49.7
Psat5g106240 Pisum sativum HOM05D006473 ORTHO05D008108 1.6e-25 120.2 165 49.7
Sed0014549 Sechium edule HOM05D006473 ORTHO05D008108 2.1e-25 119.8 177 46.3
Medtr3g082070 Medicago truncatula HOM05D006473 ORTHO05D008108 3.6e-25 119.0 165 50.9
arahy.Tifrunner.gnm1.ann1.UN21ID Arachis hypogaea HOM05D006473 ORTHO05D008108 1.1e-24 117.5 158 46.8
QL07p025679 Quercus lobata HOM05D006473 ORTHO05D008108 1.8e-24 116.7 180 42.8
QL04p064817 Quercus lobata HOM05D006473 ORTHO05D008108 4.0e-24 115.5 170 44.7
QL10p019398 Quercus lobata HOM05D006473 ORTHO05D008108 5.2e-24 115.2 185 42.2
arahy.Tifrunner.gnm1.ann1.ITU10B Arachis hypogaea HOM05D006473 ORTHO05D008108 9.0e-24 114.4 159 46.5
Atru.chr8.1011 Acer truncatum HOM05D006473 ORTHO05D008108 1.2e-23 114.0 144 47.9
BcaB02g07838 Brassica carinata HOM05D006473 ORTHO05D008108 4.4e-23 112.1 168 43.5
QL07p027003 Quercus lobata HOM05D006473 ORTHO05D008108 5.8e-23 111.7 181 43.6
Sp7g13370 Schrenkiella parvula HOM05D006473 ORTHO05D008108 1.7e-22 110.2 164 43.3
Carub.0007s2685 Capsella rubella HOM05D006473 ORTHO05D008108 4.9e-22 108.6 169 44.4
Lalb_Chr17g0337141 Lupinus albus HOM05D006473 ORTHO05D008108 4.9e-22 108.6 162 43.2
QL07p026949 Quercus lobata HOM05D006473 ORTHO05D008108 8.4e-22 107.8 189 41.3
BcaC07g37876 Brassica carinata HOM05D006473 ORTHO05D008108 1.4e-21 107.1 159 44.0
A05p16970 Brassica napus HOM05D006473 ORTHO05D008108 1.4e-21 107.1 164 41.5
BolC8t48269H Brassica oleracea HOM05D006473 ORTHO05D008108 1.4e-21 107.1 159 44.0
BraA05t20604Z Brassica rapa HOM05D006473 ORTHO05D008108 1.4e-21 107.1 162 42.6
TAR626G1390 Trochodendron aralioides HOM05D006473 ORTHO05D008108 1.9e-21 106.7 161 44.7
TAR626G1015 Trochodendron aralioides HOM05D006473 ORTHO05D008108 4.2e-21 105.5 161 46.0
A08p11670 Brassica napus HOM05D006473 ORTHO05D008108 7.1e-21 104.8 159 43.4
BraA08t33161Z Brassica rapa HOM05D006473 ORTHO05D008108 7.1e-21 104.8 159 43.4
Sc07g0001930 Simmondsia chinensis HOM05D006473 ORTHO05D008108 1.2e-20 104.0 163 44.8
THA.LOC104808506 Tarenaya hassleriana HOM05D006473 ORTHO05D008108 2.1e-20 103.2 167 43.7
AT4G15140 Arabidopsis thaliana HOM05D006473 ORTHO05D008108 3.5e-20 102.4 163 44.2
Haze_13545 Corylus avellana HOM05D006473 ORTHO05D008108 4.6e-20 102.1 142 45.8
BcaC08g44251 Brassica carinata HOM05D006473 ORTHO05D008108 6.0e-20 101.7 162 41.4
C06p16570 Brassica napus HOM05D006473 ORTHO05D008108 7.8e-20 101.3 162 41.4
BolC6t36859H Brassica oleracea HOM05D006473 ORTHO05D008108 7.8e-20 101.3 162 41.4
Nn7g38339 Nelumbo nucifera HOM05D006473 ORTHO05D008108 7.8e-20 101.3 160 43.8
QL04p064939 Quercus lobata HOM05D006473 ORTHO05D008108 7.8e-20 101.3 167 43.7
Aa31LG9G2250 Aethionema arabicum HOM05D006473 ORTHO05D008108 2.3e-19 99.8 170 38.8
Peaxi162Scf00322g00416 Petunia axillaris HOM05D006473 ORTHO05D008108 2.3e-19 99.8 167 43.1
BcaB04g18284 Brassica carinata HOM05D006473 ORTHO05D008108 3.0e-19 99.4 159 40.3
Thhalv10027487m.g Eutrema salsugineum HOM05D006473 ORTHO05D008108 3.9e-19 99.0 161 41.0
Nitab4.5_0002292g0030 Nicotiana tabacum HOM05D006473 ORTHO05D008108 8.7e-19 97.8 167 44.9
Lsat_1_v5_gn_1_29560 Lactuca sativa HOM05D006473 ORTHO05D008108 1.5e-18 97.1 183 39.9
CARHR221880 Cardamine hirsuta HOM05D006473 ORTHO05D008108 1.9e-18 96.7 165 43.0
EL10Ac6g15336 Beta vulgaris HOM05D006473 ORTHO05D008108 2.5e-18 96.3 169 37.3
AL7G40560 Arabidopsis lyrata HOM05D006473 ORTHO05D008108 7.3e-18 94.7 163 41.7
Hund04387 Selenicereus undatus HOM05D006473 ORTHO05D008108 2.1e-17 93.2 174 36.8
GSVIVG01015888001 Vitis vinifera HOM05D006473 ORTHO05D008108 2.1e-17 93.2 149 45.6
Aqoxy5G02466 Aquilegia oxysepala HOM05D006473 ORTHO05D008108 3.6e-17 92.4 157 41.4
ECA247G3587 Erigeron canadensis HOM05D006473 ORTHO05D008108 3.6e-17 92.4 175 41.7
CAN.G529.20 Capsicum annuum HOM05D006473 ORTHO05D008108 4.8e-17 92.0 153 41.8
Hund23023 Selenicereus undatus HOM05D006473 ORTHO05D008108 4.0e-16 89.0 172 39.5
Ca_16320_v3 Cicer arietinum L. HOM05D006473 ORTHO05D008108 6.9e-16 88.2 149 44.3
Peaxi162Scf00393g01011 Petunia axillaris HOM05D006473 ORTHO05D008108 2.0e-15 86.7 164 39.0
Solyc07g043070.3 Solanum lycopersicum HOM05D006473 ORTHO05D008108 2.0e-15 86.7 149 40.9
Sopen07g022630 Solanum pennellii HOM05D006473 ORTHO05D008108 2.0e-15 86.7 149 40.9
CSS0026100 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 2.6e-15 86.3 175 40.0
CSS0046570 Camellia sinensis var. sinensis HOM05D006473 ORTHO05D008108 2.6e-15 86.3 175 40.0
PGSC0003DMG400013558 Solanum tuberosum HOM05D006473 ORTHO05D008108 3.4e-15 85.9 146 42.5
Migut.H01260 Erythranthe guttata HOM05D006473 ORTHO05D008108 4.5e-15 85.5 151 41.1
Nitab4.5_0011512g0010 Nicotiana tabacum HOM05D006473 ORTHO05D008108 1.7e-14 83.6 161 42.2
vmacro08765 Vaccinium macrocarpon HOM05D006473 ORTHO05D008108 2.2e-14 83.2 156 41.0
Actinidia32074 Actinidia chinensis HOM05D006473 ORTHO05D008108 3.8e-14 82.4 190 37.4
Cc00_g04870 Coffea canephora HOM05D006473 ORTHO05D008108 3.8e-14 82.4 154 42.9
Rhsim12G0015400 Rhododendron simsii HOM05D006473 ORTHO05D008108 6.4e-14 81.6 148 39.9
DCAR_029496 Daucus carota HOM05D006473 ORTHO05D008108 8.4e-14 81.3 173 38.7
Cpa.g.sc32.52 Carica papaya HOM05D006473 ORTHO05D008108 1.1e-13 80.9 168 41.7
QL07p026979 Quercus lobata HOM05D006473 ORTHO05D008108 5.4e-13 78.6 118 44.1
HanXRQChr02g0035171 Helianthus annuus HOM05D006473 ORTHO05D008108 9.3e-13 77.8 167 35.3
Actinidia12507 Actinidia chinensis HOM05D006473 ORTHO05D008108 2.7e-12 76.3 178 39.3
QL09p045725 Quercus lobata HOM05D006473 ORTHO05D008108 2.7e-12 76.3 112 44.6
PSO675G8005 Papaver somniferum HOM05D006473 ORTHO05D008108 3.5e-12 75.9 171 35.1
SGA_v2.0_scaffold49G18372 Striga asiatica HOM05D006473 ORTHO05D008108 1.3e-11 73.9 135 40.7
CDE05G3197 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 1.8e-11 73.6 139 36.7
Nitab4.5_0000170g0320 Nicotiana tabacum HOM05D006473 ORTHO05D008108 8.7e-11 71.2 112 44.6
Zm00001eb078060 Zea mays HOM05D006473 ORTHO05D008108 3.3e-10 69.3 159 37.7
AUR62017858 Chenopodium quinoa HOM05D006473 ORTHO05D008108 4.3e-10 68.9 155 33.5
Os04g0504200 Oryza sativa ssp. japonica HOM05D006473 ORTHO05D008108 5.6e-10 68.6 162 35.8
HPP92_016064 Vanilla planifolia HOM05D006473 ORTHO05D008108 7.4e-10 68.2 140 36.4
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 2.1e-09 66.6 117 38.5
CDE11G0296 Ceratophyllum demersum HOM05D006473 ORTHO05D008108 3.1e-08 62.8 51 58.8
QL05p058452 Quercus lobata HOM05D000045 ORTHO05D000611 3.1e-08 62.8 67 50.7
Oeu027256.1 Olea europaea HOM05D006473 ORTHO05D008108 4.0e-08 62.4 101 45.5
ATR0763G071 Amborella trichopoda HOM05D006473 ORTHO05D008108 5.3e-08 62.0 149 35.6


User provided reference genes

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