Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 0.0e+00 1312.4 690 100.0
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 5.0e-78 296.6 719 36.4
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 1.7e-70 271.6 740 34.5
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 1.1e-69 268.9 747 35.6
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 1.2e-68 265.4 773 33.8
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 3.6e-68 263.8 731 34.1
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 7.5e-66 256.1 722 34.5
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 6.3e-65 253.1 740 33.8
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 1.4e-64 251.9 734 34.3
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 1.4e-64 251.9 643 35.6
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 7.7e-63 246.1 740 33.5
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 8.5e-62 242.7 743 33.2
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 2.5e-61 241.1 739 33.4
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 1.8e-59 235.0 688 33.1
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 1.8e-59 235.0 728 33.4
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 1.5e-58 231.9 720 33.9
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 4.4e-58 230.3 721 32.3
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 4.1e-56 223.8 735 32.8
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 7.0e-56 223.0 729 33.1
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 1.3e-54 218.8 679 34.6
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 3.3e-53 214.2 703 31.9
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 7.3e-53 213.0 626 34.3
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 3.6e-52 210.7 705 32.8
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 8.0e-52 209.5 662 33.2
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 1.0e-51 209.1 737 31.5
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 8.9e-51 206.1 687 32.9
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 1.2e-50 205.7 713 33.1
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 1.2e-50 205.7 672 30.4
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 1.7e-49 201.8 547 38.2
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 1.1e-48 199.1 762 30.2
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.4e-48 198.0 722 31.3
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 2.0e-47 194.9 725 32.4
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 6.6e-46 189.9 655 33.9
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 4.3e-45 187.2 718 32.3
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 7.3e-45 186.4 718 29.1
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 5.2e-43 180.3 716 31.4
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 5.8e-42 176.8 679 32.1
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 2.9e-41 174.5 658 29.5
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.9e-41 174.5 711 31.9
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 8.3e-41 172.9 630 31.3
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 1.1e-40 172.6 731 30.9
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.9e-40 171.8 604 33.8
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 1.9e-40 171.8 587 33.9
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 3.2e-40 171.0 649 30.0
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 4.1e-40 170.6 691 31.0
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 4.1e-40 170.6 411 33.8
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 5.4e-40 170.2 679 31.1
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 7.0e-40 169.9 710 28.5
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 7.0e-40 169.9 681 29.4
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 9.2e-40 169.5 744 30.8
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 1.0e-38 166.0 631 30.4
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 5.0e-38 163.7 723 28.2
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 2.5e-37 161.4 665 29.3
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 3.3e-37 161.0 736 30.8
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 2.8e-36 157.9 756 29.6
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 8.1e-36 156.4 624 28.7
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 2.3e-35 154.8 662 29.6
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 8.9e-35 152.9 764 28.8
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 4.4e-34 150.6 704 27.6
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 1.7e-33 148.7 740 28.5
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 2.2e-33 148.3 743 29.2
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 5.4e-32 143.7 613 30.5
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 6.6e-30 136.7 620 30.3
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 3.1e-27 127.9 629 26.7
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 2.0e-26 125.2 622 26.5
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 2.0e-26 125.2 574 29.3
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 1.7e-25 122.1 624 27.7
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 4.9e-25 120.6 630 26.8
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 1.4e-24 119.0 614 27.2
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 4.1e-24 117.5 609 26.8
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 7.1e-24 116.7 662 27.2
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.6e-23 115.5 614 29.5
CSS0024961 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 4.6e-23 114.0 295 35.6
Duzib041G0240 Durio zibethinus HOM05D007378 ORTHO05D007577 6.0e-23 113.6 215 41.9
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 3.0e-22 111.3 642 28.8
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 2.5e-21 108.2 691 24.7
Medtr1g025180 Medicago truncatula HOM05D007378 ORTHO05D007577 4.3e-21 107.5 710 28.7
Aqoxy5G01785 Aquilegia oxysepala HOM05D007378 ORTHO05D007577 7.3e-21 106.7 634 27.0
CSS0029124 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.8e-20 104.8 239 38.1
Sp5g30850 Schrenkiella parvula HOM05D010473 ORTHO05D007577 8.1e-20 103.2 588 30.6
TAR625G0788 Trochodendron aralioides HOM05D000628 ORTHO05D001121 1.4e-19 102.4 207 39.6
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 2.4e-19 101.7 736 26.4
AL2G35720 Arabidopsis lyrata HOM05D010473 ORTHO05D007577 4.0e-19 100.9 614 27.4
Thhalv10018322m.g Eutrema salsugineum HOM05D010473 ORTHO05D007577 8.9e-19 99.8 642 28.7
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 1.3e-17 95.9 737 26.3
PSO700G0360 Papaver somniferum HOM05D007378 ORTHO05D007577 2.2e-17 95.1 701 26.1
AT1G75730 Arabidopsis thaliana HOM05D010473 ORTHO05D007577 7.1e-16 90.1 613 26.1
PSO170G0005 Papaver somniferum HOM05D007378 ORTHO05D007577 2.1e-15 88.6 678 26.1
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 2.1e-15 88.6 688 26.3
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 7.8e-15 86.7 617 25.9
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 1.0e-14 86.3 525 27.0
Migut.C00828 Erythranthe guttata HOM05D007378 ORTHO05D007577 1.5e-13 82.4 513 26.9
Carub.0002s2258 Capsella rubella HOM05D010473 ORTHO05D007577 3.6e-12 77.8 555 25.9
THA.LOC104814031 Tarenaya hassleriana HOM05D010473 ORTHO05D007577 1.8e-11 75.5 644 25.3
Aa31LG4G5960 Aethionema arabicum HOM05D010473 ORTHO05D007577 4.0e-11 74.3 639 25.7
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 1.7e-09 68.9 604 24.8
ATR0152G004 Amborella trichopoda HOM05D007378 ORTHO05D007577 1.9e-08 65.5 115 39.1
CARHR069140 Cardamine hirsuta HOM05D010473 ORTHO05D007577 9.3e-08 63.2 172 36.6
BraA07t31661Z Brassica rapa HOM05D010473 ORTHO05D007577 1.8e-06 58.9 450 27.6
CSS0034917 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 2.3e-06 58.5 116 36.2
BcaB05g24937 Brassica carinata HOM05D010473 ORTHO05D007577 8.7e-06 56.6 120 41.7


User provided reference genes

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